RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 TMEM221A6NGB7 291 aa14.07□□□□□ -0.16
SEC61B-201ENST00000223641 C10orf142B7Z368 130 aa14.07□□□□□ -0.16
SEC61B-201ENST00000223641 H0Y858 1186 aa14.07□□□□□ -0.16
SEC61B-201ENST00000223641 M0R296 226 aa14.07□□□□□ -0.16
SEC61B-201ENST00000223641 SLC7A4O43246 635 aa14.07□□□□□ -0.16
SEC61B-201ENST00000223641 CRTAMO95727 393 aa14.07□□□□□ -0.16
SEC61B-201ENST00000223641 CYP2A6P11509 494 aaPredicted RBP14.07□□□□□ -0.16
SEC61B-201ENST00000223641 TSHRP16473 764 aa14.07□□□□□ -0.16
SEC61B-201ENST00000223641 ZNF30P17039 623 aa14.07□□□□□ -0.16
SEC61B-201ENST00000223641 LHCGRP22888 699 aa14.07□□□□□ -0.16
SEC61B-201ENST00000223641 VIPR1P32241 457 aa14.07□□□□□ -0.16
SEC61B-201ENST00000223641 HMGCLP35914 325 aa14.07□□□□□ -0.16
SEC61B-201ENST00000223641 CCDC15Q0P6D6 951 aa14.07□□□□□ -0.16
SEC61B-201ENST00000223641 ELP6Q0PNE2 266 aa14.07□□□□□ -0.16
SEC61B-201ENST00000223641 RALGDSQ12967 914 aa14.07□□□□□ -0.16
SEC61B-201ENST00000223641 LAMB3Q13751 1172 aa14.07□□□□□ -0.16
SEC61B-201ENST00000223641 MAP9Q49MG5 647 aa14.07□□□□□ -0.16
SEC61B-201ENST00000223641 TMEM52BQ4KMG9 183 aa14.07□□□□□ -0.16
SEC61B-201ENST00000223641 STEAP4Q687X5 459 aa14.07□□□□□ -0.16
SEC61B-201ENST00000223641 FBXL19Q6PCT2 694 aa14.07□□□□□ -0.16
SEC61B-201ENST00000223641 DPPA4Q7L190 304 aa14.07□□□□□ -0.16
SEC61B-201ENST00000223641 NLRP9Q7RTR0 991 aa14.07□□□□□ -0.16
SEC61B-201ENST00000223641 BMP8AQ7Z5Y6 402 aa14.07□□□□□ -0.16
SEC61B-201ENST00000223641 KBTBD6Q86V97 674 aa14.07□□□□□ -0.16
SEC61B-201ENST00000223641 CCDC25Q86WR0 208 aa14.07□□□□□ -0.16
SEC61B-201ENST00000223641 HDDC3Q8N4P3 179 aa14.07□□□□□ -0.16
SEC61B-201ENST00000223641 CAMKK1Q8N5S9 505 aa14.07□□□□□ -0.16
SEC61B-201ENST00000223641 FBXO36Q8NEA4 188 aa14.07□□□□□ -0.16
SEC61B-201ENST00000223641 BLOC1S5Q8TDH9 187 aa14.07□□□□□ -0.16
SEC61B-201ENST00000223641 PYROXD1Q8WU10 500 aa14.07□□□□□ -0.16
SEC61B-201ENST00000223641 STAMBPL1Q96FJ0 436 aa14.07□□□□□ -0.16
SEC61B-201ENST00000223641 ZNF778Q96MU6 729 aa14.07□□□□□ -0.16
SEC61B-201ENST00000223641 CDC42EP4Q9H3Q1 356 aaKnown RBP14.07□□□□□ -0.16
SEC61B-201ENST00000223641 ITM2CQ9NQX7 267 aa14.07□□□□□ -0.16
SEC61B-201ENST00000223641 TREX1Q9NSU2 369 aa14.07□□□□□ -0.16
SEC61B-201ENST00000223641 FBXL12Q9NXK8 326 aa14.07□□□□□ -0.16
SEC61B-201ENST00000223641 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.07□□□□□ -0.168e-18■■■□□ 17.5
SEC61B-201ENST00000223641 IL17CQ9P0M4 197 aa14.07□□□□□ -0.16
SEC61B-201ENST00000223641 USP36Q9P275 1121 aaKnown RBP14.07□□□□□ -0.16
SEC61B-201ENST00000223641 B4GALT6Q9UBX8 382 aa14.07□□□□□ -0.16
SEC61B-201ENST00000223641 EBF1Q9UH73 591 aa14.07□□□□□ -0.16
SEC61B-201ENST00000223641 FZD4Q9ULV1 537 aa14.07□□□□□ -0.16
SEC61B-201ENST00000223641 FADS3Q9Y5Q0 445 aa14.07□□□□□ -0.16
SEC61B-201ENST00000223641 BPTFQ12830 3046 aa14.07□□□□□ -0.16
SEC61B-201ENST00000223641 A0A0C4DFX4 3053 aa14.06□□□□□ -0.16
SEC61B-201ENST00000223641 PLK4O00444 970 aa14.06□□□□□ -0.16
SEC61B-201ENST00000223641 USP1O94782 785 aa14.06□□□□□ -0.16
SEC61B-201ENST00000223641 CLDN7O95471 211 aa14.06□□□□□ -0.16
SEC61B-201ENST00000223641 TTC4O95801 387 aa14.06□□□□□ -0.16
SEC61B-201ENST00000223641 PGAM1P18669 254 aa14.06□□□□□ -0.16
SEC61B-201ENST00000223641 LPOP22079 712 aaPredicted RBP14.06□□□□□ -0.16
SEC61B-201ENST00000223641 ZNF140P52738 457 aaPredicted RBP14.06□□□□□ -0.16
SEC61B-201ENST00000223641 PDE1BQ01064 536 aa14.06□□□□□ -0.16
SEC61B-201ENST00000223641 CREB5Q02930 508 aa14.06□□□□□ -0.16
SEC61B-201ENST00000223641 PTSQ03393 145 aa14.06□□□□□ -0.16
SEC61B-201ENST00000223641 SFSWAPQ12872 951 aaKnown RBP14.06□□□□□ -0.16
SEC61B-201ENST00000223641 FRG1Q14331 258 aaKnown RBP14.06□□□□□ -0.16
SEC61B-201ENST00000223641 TTC31Q49AM3 519 aaPredicted RBP14.06□□□□□ -0.16
SEC61B-201ENST00000223641 ANKRD20A4Q4UJ75 823 aa14.06□□□□□ -0.16
SEC61B-201ENST00000223641 LRRC73Q5JTD7 316 aa14.06□□□□□ -0.16
SEC61B-201ENST00000223641 SPDYCQ5MJ68 293 aa14.06□□□□□ -0.16
SEC61B-201ENST00000223641 HP1BP3Q5SSJ5 553 aaPredicted RBP14.06□□□□□ -0.16
SEC61B-201ENST00000223641 BEND6Q5SZJ8 279 aaPredicted RBP14.06□□□□□ -0.16
SEC61B-201ENST00000223641 TSTD2Q5T7W7 516 aa14.06□□□□□ -0.16
SEC61B-201ENST00000223641 DENND2CQ68D51 928 aa14.06□□□□□ -0.16
SEC61B-201ENST00000223641 ERAP2Q6P179 960 aa14.06□□□□□ -0.16
SEC61B-201ENST00000223641 CYS1Q717R9 158 aa14.06□□□□□ -0.16
SEC61B-201ENST00000223641 TRMT10CQ7L0Y3 403 aaKnown RBP14.06□□□□□ -0.16
SEC61B-201ENST00000223641 LYSMD3Q7Z3D4 306 aa14.06□□□□□ -0.16
SEC61B-201ENST00000223641 GLT6D1Q7Z4J2 308 aa14.06□□□□□ -0.16
SEC61B-201ENST00000223641 TSPAN33Q86UF1 283 aa14.06□□□□□ -0.16
SEC61B-201ENST00000223641 ANKMY2Q8IV38 441 aa14.06□□□□□ -0.16
SEC61B-201ENST00000223641 MREGQ8N565 214 aa14.06□□□□□ -0.16
SEC61B-201ENST00000223641 PAF1Q8N7H5 531 aa14.06□□□□□ -0.16
SEC61B-201ENST00000223641 PPHLN1Q8NEY8 458 aaKnown RBP14.06□□□□□ -0.16
SEC61B-201ENST00000223641 TSTD1Q8NFU3 115 aa14.06□□□□□ -0.16
SEC61B-201ENST00000223641 STYXQ8WUJ0 223 aa14.06□□□□□ -0.16
SEC61B-201ENST00000223641 C9orf72Q96LT7 481 aa14.06□□□□□ -0.16
SEC61B-201ENST00000223641 FCRL3Q96P31 734 aaPredicted RBP14.06□□□□□ -0.16
SEC61B-201ENST00000223641 OMDQ99983 421 aa14.06□□□□□ -0.16
SEC61B-201ENST00000223641 FUT8Q9BYC5 575 aa14.06□□□□□ -0.16
SEC61B-201ENST00000223641 EPB41L4BQ9H329 900 aa14.06□□□□□ -0.16
SEC61B-201ENST00000223641 KDM4CQ9H3R0 1056 aa14.06□□□□□ -0.16
SEC61B-201ENST00000223641 SEMA4AQ9H3S1 761 aa14.06□□□□□ -0.16
SEC61B-201ENST00000223641 ZFYVE1Q9HBF4 777 aa14.06□□□□□ -0.16
SEC61B-201ENST00000223641 LRRC4CQ9HCJ2 640 aa14.06□□□□□ -0.16
SEC61B-201ENST00000223641 NINJ2Q9NZG7 142 aa14.06□□□□□ -0.16
SEC61B-201ENST00000223641 ZC3H7BQ9UGR2 993 aaKnown RBP14.06□□□□□ -0.16
SEC61B-201ENST00000223641 CHMP2BQ9UQN3 213 aa14.06□□□□□ -0.16
SEC61B-201ENST00000223641 ARL5AQ9Y689 179 aa14.06□□□□□ -0.16
SEC61B-201ENST00000223641 FAM169AQ9Y6X4 670 aa14.06□□□□□ -0.16
SEC61B-201ENST00000223641 A0A0U1RQS6 177 aa14.05□□□□□ -0.16
SEC61B-201ENST00000223641 C1orf232A0A0U1RR37 186 aa14.05□□□□□ -0.16
SEC61B-201ENST00000223641 ZCWPW2A0A1B0GU75 182 aa14.05□□□□□ -0.16
SEC61B-201ENST00000223641 C2orf81A6NN90 581 aa14.05□□□□□ -0.16
SEC61B-201ENST00000223641 H7C0S8 307 aa14.05□□□□□ -0.16
SEC61B-201ENST00000223641 K7ESF4 209 aa14.05□□□□□ -0.16
SEC61B-201ENST00000223641 PSMD11O00231 422 aa14.05□□□□□ -0.16
SEC61B-201ENST00000223641 TSPAN6O43657 245 aa14.05□□□□□ -0.16
SEC61B-201ENST00000223641 PLRG1O43660 514 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms