RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 OR7D4Q8NG98 312 aa15.12■□□□□ 0.01
EFNB1-201ENST00000204961 HMGCLL1Q8TB92 370 aa15.12■□□□□ 0.01
EFNB1-201ENST00000204961 IGSF8Q969P0 613 aa15.12■□□□□ 0.01
EFNB1-201ENST00000204961 GPR78Q96P69 363 aa15.12■□□□□ 0.01
EFNB1-201ENST00000204961 Q9H521 79 aa15.12■□□□□ 0.01
EFNB1-201ENST00000204961 RCOR3Q9P2K3 495 aaPredicted RBP15.12■□□□□ 0.01
EFNB1-201ENST00000204961 ADAM28Q9UKQ2 775 aa15.12■□□□□ 0.01
EFNB1-201ENST00000204961 DERAQ9Y315 318 aa15.12■□□□□ 0.01
EFNB1-201ENST00000204961 HEATR9A2RTY3 570 aa15.12■□□□□ 0.01
EFNB1-201ENST00000204961 TMEM114B3SHH9 223 aa15.12■□□□□ 0.01
EFNB1-201ENST00000204961 GUCA1CO95843 209 aa15.12■□□□□ 0.01
EFNB1-201ENST00000204961 TFPTP0C1Z6 253 aa15.12■□□□□ 0.01
EFNB1-201ENST00000204961 PAMP19021 973 aa15.12■□□□□ 0.01
EFNB1-201ENST00000204961 GATMP50440 423 aa15.12■□□□□ 0.01
EFNB1-201ENST00000204961 TBCELQ5QJ74 424 aa15.12■□□□□ 0.01
EFNB1-201ENST00000204961 AGAP9Q5VTM2 703 aa15.12■□□□□ 0.01
EFNB1-201ENST00000204961 LINC00523Q86TU6 105 aa15.12■□□□□ 0.01
EFNB1-201ENST00000204961 PGAM4Q8N0Y7 254 aa15.12■□□□□ 0.01
EFNB1-201ENST00000204961 MIER2Q8N344 545 aa15.12■□□□□ 0.01
EFNB1-201ENST00000204961 CBR4Q8N4T8 237 aa15.12■□□□□ 0.01
EFNB1-201ENST00000204961 KIFC1Q9BW19 673 aa15.12■□□□□ 0.01
EFNB1-201ENST00000204961 AKTIPQ9H8T0 292 aa15.12■□□□□ 0.01
EFNB1-201ENST00000204961 SMPD4Q9NXE4 827 aa15.12■□□□□ 0.01
EFNB1-201ENST00000204961 PCDHGC4Q9Y5F7 938 aa15.12■□□□□ 0.01
EFNB1-201ENST00000204961 MAGED1Q9Y5V3 778 aaPredicted RBP15.12■□□□□ 0.01
EFNB1-201ENST00000204961 VCANP13611 3396 aa15.11■□□□□ 0.01
EFNB1-201ENST00000204961 SRP72O76094 671 aaKnown RBP15.11■□□□□ 0.01
EFNB1-201ENST00000204961 F9P00740 461 aa15.11■□□□□ 0.01
EFNB1-201ENST00000204961 ARCN1P48444 511 aaKnown RBP15.11■□□□□ 0.01
EFNB1-201ENST00000204961 GEMP55040 296 aa15.11■□□□□ 0.01
EFNB1-201ENST00000204961 SH3BP2P78314 561 aa15.11■□□□□ 0.01
EFNB1-201ENST00000204961 SEMA3BQ13214 749 aa15.11■□□□□ 0.01
EFNB1-201ENST00000204961 NEDD8Q15843 81 aa15.11■□□□□ 0.01
EFNB1-201ENST00000204961 UGP2Q16851 508 aa15.11■□□□□ 0.01
EFNB1-201ENST00000204961 PIK3R6Q5UE93 754 aa15.11■□□□□ 0.01
EFNB1-201ENST00000204961 DCLRE1AQ6PJP8 1040 aa15.11■□□□□ 0.01
EFNB1-201ENST00000204961 RETREG3Q86VR2 466 aa15.11■□□□□ 0.01
EFNB1-201ENST00000204961 LTB4R2Q9NPC1 389 aa15.11■□□□□ 0.01
EFNB1-201ENST00000204961 CHCHD3Q9NX63 227 aaKnown RBP15.11■□□□□ 0.01
EFNB1-201ENST00000204961 CACNA2D2Q9NY47 1150 aa15.11■□□□□ 0.01
EFNB1-201ENST00000204961 GALPQ9UBC7 116 aa15.11■□□□□ 0.01
EFNB1-201ENST00000204961 DNAJB4Q9UDY4 337 aa15.11■□□□□ 0.01
EFNB1-201ENST00000204961 CROTQ9UKG9 612 aa15.11■□□□□ 0.01
EFNB1-201ENST00000204961 PCDHGA7Q9Y5G6 932 aa15.11■□□□□ 0.01
EFNB1-201ENST00000204961 A0A0J9YYE9 177 aa15.11■□□□□ 0.01
EFNB1-201ENST00000204961 HHLA1C9JL84 531 aa15.11■□□□□ 0.01
EFNB1-201ENST00000204961 GABRDO14764 452 aa15.11■□□□□ 0.01
EFNB1-201ENST00000204961 IRAK2O43187 625 aa15.11■□□□□ 0.01
EFNB1-201ENST00000204961 HNRNPCP07910 306 aaKnown RBP eCLIP15.11■□□□□ 0.01
EFNB1-201ENST00000204961 LTA4HP09960 611 aaKnown RBP15.11■□□□□ 0.01
EFNB1-201ENST00000204961 KCNQ1P51787 676 aa15.11■□□□□ 0.01
EFNB1-201ENST00000204961 MYBPC3Q14896 1274 aa15.11■□□□□ 0.01
EFNB1-201ENST00000204961 SCD5Q86SK9 330 aa15.11■□□□□ 0.01
EFNB1-201ENST00000204961 ITFG2Q969R8 447 aa15.11■□□□□ 0.01
EFNB1-201ENST00000204961 FBXL20Q96IG2 436 aa15.11■□□□□ 0.01
EFNB1-201ENST00000204961 VPS50Q96JG6 964 aa15.11■□□□□ 0.01
EFNB1-201ENST00000204961 MAGEB16A2A368 324 aa15.1■□□□□ 0.01
EFNB1-201ENST00000204961 SOCS2O14508 198 aa15.1■□□□□ 0.01
EFNB1-201ENST00000204961 ANGPT2O15123 496 aa15.1■□□□□ 0.01
EFNB1-201ENST00000204961 NCAM2O15394 837 aa15.1■□□□□ 0.01
EFNB1-201ENST00000204961 B4GAT1O43505 415 aa15.1■□□□□ 0.01
EFNB1-201ENST00000204961 MAN1A2O60476 641 aa15.1■□□□□ 0.01
EFNB1-201ENST00000204961 SH3BGRLO75368 114 aa15.1■□□□□ 0.01
EFNB1-201ENST00000204961 RHOBTB1O94844 696 aa15.1■□□□□ 0.01
EFNB1-201ENST00000204961 SNRPB2P08579 225 aaKnown RBP15.1■□□□□ 0.01
EFNB1-201ENST00000204961 SMIM18P0DKX4 95 aa15.1■□□□□ 0.01
EFNB1-201ENST00000204961 ODC1P11926 461 aa15.1■□□□□ 0.01
EFNB1-201ENST00000204961 RPL17P18621 184 aaKnown RBP15.1■□□□□ 0.01
EFNB1-201ENST00000204961 LSAMPQ13449 338 aa15.1■□□□□ 0.01
EFNB1-201ENST00000204961 TIGD2Q4W5G0 525 aa15.1■□□□□ 0.01
EFNB1-201ENST00000204961 MRPL57Q9BQC6 102 aaKnown RBP15.1■□□□□ 0.01
EFNB1-201ENST00000204961 IGSF5Q9NSI5 407 aa15.1■□□□□ 0.01
EFNB1-201ENST00000204961 ZMYM5Q9UJ78 669 aa15.1■□□□□ 0.01
EFNB1-201ENST00000204961 RIMS3Q9UJD0 308 aa15.1■□□□□ 0.01
EFNB1-201ENST00000204961 ZNF711Q9Y462 761 aa15.1■□□□□ 0.01
EFNB1-201ENST00000204961 DNAH14Q0VDD8 3507 aa15.1■□□□□ 0.01
EFNB1-201ENST00000204961 GON4LQ3T8J9 2241 aa15.1■□□□□ 0.01
EFNB1-201ENST00000204961 A0A1W2PQ67 120 aa15.1■□□□□ 0.01
EFNB1-201ENST00000204961 CDC7O00311 574 aa15.1■□□□□ 0.01
EFNB1-201ENST00000204961 NRP2O60462 931 aa15.1■□□□□ 0.01
EFNB1-201ENST00000204961 ALDOCP09972 364 aaKnown RBP15.1■□□□□ 0.01
EFNB1-201ENST00000204961 MYL4P12829 197 aa15.1■□□□□ 0.01
EFNB1-201ENST00000204961 ATP6V1B2P21281 511 aa15.1■□□□□ 0.01
EFNB1-201ENST00000204961 CA8P35219 290 aa15.1■□□□□ 0.01
EFNB1-201ENST00000204961 STT3AP46977 705 aa15.1■□□□□ 0.01
EFNB1-201ENST00000204961 MRPS6P82932 125 aaKnown RBP15.1■□□□□ 0.01
EFNB1-201ENST00000204961 ZNF235Q14590 738 aa15.1■□□□□ 0.01
EFNB1-201ENST00000204961 RBBP7Q16576 425 aa15.1■□□□□ 0.01
EFNB1-201ENST00000204961 OGFRL1Q5TC84 451 aaPredicted RBP15.1■□□□□ 0.01
EFNB1-201ENST00000204961 TAS2R42Q7RTR8 314 aa15.1■□□□□ 0.01
EFNB1-201ENST00000204961 BHLHA9Q7RTU4 235 aa15.1■□□□□ 0.01
EFNB1-201ENST00000204961 DHFR2Q86XF0 187 aa15.1■□□□□ 0.01
EFNB1-201ENST00000204961 MAGEE2Q8TD90 523 aaPredicted RBP15.1■□□□□ 0.01
EFNB1-201ENST00000204961 CATSPERBQ9H7T0 1116 aa15.1■□□□□ 0.01
EFNB1-201ENST00000204961 MID2Q9UJV3 735 aa15.1■□□□□ 0.01
EFNB1-201ENST00000204961 COMMD3-BMI1R4GMX3 469 aa15.1■□□□□ 0.01
EFNB1-201ENST00000204961 COL1A2P08123 1366 aa15.1■□□□□ 0.01
EFNB1-201ENST00000204961 MATN3O15232 486 aa15.1■□□□□ 0.01
EFNB1-201ENST00000204961 OR1I1O60431 355 aa15.1■□□□□ 0.01
EFNB1-201ENST00000204961 GOT2P00505 430 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms