RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 BEGAINQ9BUH8 593 aa16.8■□□□□ 0.28
CTDP1-201ENST00000075430 AKTIPQ9H8T0 292 aa16.8■□□□□ 0.28
CTDP1-201ENST00000075430 PRDM8Q9NQV8 689 aa16.8■□□□□ 0.28
CTDP1-201ENST00000075430 FAIMQ9NVQ4 179 aa16.8■□□□□ 0.28
CTDP1-201ENST00000075430 ADAM28Q9UKQ2 775 aa16.8■□□□□ 0.28
CTDP1-201ENST00000075430 KIAA1257Q9ULG3 409 aa16.8■□□□□ 0.28
CTDP1-201ENST00000075430 BPTFQ12830 3046 aa16.8■□□□□ 0.28
CTDP1-201ENST00000075430 GNGT2O14610 69 aa16.8■□□□□ 0.28
CTDP1-201ENST00000075430 C22orf31O95567 290 aa16.8■□□□□ 0.28
CTDP1-201ENST00000075430 ATP5F1P24539 256 aaPredicted RBP16.8■□□□□ 0.28
CTDP1-201ENST00000075430 RELAQ04206 551 aa16.8■□□□□ 0.28
CTDP1-201ENST00000075430 INPP5AQ14642 412 aa16.8■□□□□ 0.28
CTDP1-201ENST00000075430 GRIK4Q16099 956 aa16.8■□□□□ 0.28
CTDP1-201ENST00000075430 BTBD8Q5XKL5 378 aa16.8■□□□□ 0.28
CTDP1-201ENST00000075430 SLC7A5P1Q8MH63 180 aa16.8■□□□□ 0.28
CTDP1-201ENST00000075430 SDCCAG3Q96C92 435 aa16.8■□□□□ 0.28
CTDP1-201ENST00000075430 SLC25A23Q9BV35 468 aa16.8■□□□□ 0.28
CTDP1-201ENST00000075430 KLHL25Q9H0H3 589 aa16.8■□□□□ 0.28
CTDP1-201ENST00000075430 SLC38A7Q9NVC3 462 aa16.8■□□□□ 0.28
CTDP1-201ENST00000075430 PKD2L2Q9NZM6 624 aa16.8■□□□□ 0.28
CTDP1-201ENST00000075430 POLD3Q15054 466 aaPredicted RBP16.79■□□□□ 0.28
CTDP1-201ENST00000075430 LYSMD3Q7Z3D4 306 aa16.79■□□□□ 0.28
CTDP1-201ENST00000075430 CLEC14AQ86T13 490 aa16.79■□□□□ 0.28
CTDP1-201ENST00000075430 PPHLN1Q8NEY8 458 aaKnown RBP16.79■□□□□ 0.28
CTDP1-201ENST00000075430 RPF2Q9H7B2 306 aaKnown RBP16.79■□□□□ 0.28
CTDP1-201ENST00000075430 WDR70Q9NW82 654 aa16.79■□□□□ 0.28
CTDP1-201ENST00000075430 FUOMA2VDF0 154 aa16.79■□□□□ 0.28
CTDP1-201ENST00000075430 ALBP02768 609 aa16.79■□□□□ 0.28
CTDP1-201ENST00000075430 MATN1P21941 496 aa16.79■□□□□ 0.28
CTDP1-201ENST00000075430 LRP8Q14114 963 aa16.79■□□□□ 0.28
CTDP1-201ENST00000075430 ZBED5Q49AG3 693 aa16.79■□□□□ 0.28
CTDP1-201ENST00000075430 C6orf10Q5SRN2 563 aa16.79■□□□□ 0.28
CTDP1-201ENST00000075430 PLPPR4Q7Z2D5 763 aa16.79■□□□□ 0.28
CTDP1-201ENST00000075430 OSTM1Q86WC4 334 aa16.79■□□□□ 0.28
CTDP1-201ENST00000075430 EPHX4Q8IUS5 362 aa16.79■□□□□ 0.28
CTDP1-201ENST00000075430 TMEM151AQ8N4L1 468 aa16.79■□□□□ 0.28
CTDP1-201ENST00000075430 ATPAF2Q8N5M1 289 aa16.79■□□□□ 0.28
CTDP1-201ENST00000075430 PCYOX1LQ8NBM8 494 aa16.79■□□□□ 0.28
CTDP1-201ENST00000075430 B3GALNT2Q8NCR0 500 aa16.79■□□□□ 0.28
CTDP1-201ENST00000075430 PPM1MQ96MI6 270 aa16.79■□□□□ 0.28
CTDP1-201ENST00000075430 MUS81Q96NY9 551 aa16.79■□□□□ 0.28
CTDP1-201ENST00000075430 ACOX2Q99424 681 aa16.79■□□□□ 0.28
CTDP1-201ENST00000075430 TBCDQ9BTW9 1192 aa16.79■□□□□ 0.28
CTDP1-201ENST00000075430 C1QTNF1Q9BXJ1 281 aa16.79■□□□□ 0.28
CTDP1-201ENST00000075430 SLC2A11Q9BYW1 496 aa16.79■□□□□ 0.28
CTDP1-201ENST00000075430 NDFIP2Q9NV92 336 aa16.79■□□□□ 0.28
CTDP1-201ENST00000075430 PNMA8BQ9ULN7 279 aaPredicted RBP16.79■□□□□ 0.28
CTDP1-201ENST00000075430 NDUFAF1Q9Y375 327 aa16.79■□□□□ 0.28
CTDP1-201ENST00000075430 LOXHD1Q8IVV2 1947 aa16.79■□□□□ 0.28
CTDP1-201ENST00000075430 PIP5K1BO14986 540 aa16.79■□□□□ 0.28
CTDP1-201ENST00000075430 CDH3P22223 829 aa16.79■□□□□ 0.28
CTDP1-201ENST00000075430 LAPTM4AQ15012 233 aa16.79■□□□□ 0.28
CTDP1-201ENST00000075430 NHSL2Q5HYW2 709 aa16.79■□□□□ 0.28
CTDP1-201ENST00000075430 TWF2Q6IBS0 349 aaKnown RBP16.79■□□□□ 0.28
CTDP1-201ENST00000075430 PTGR2Q8N8N7 351 aaPredicted RBP16.79■□□□□ 0.28
CTDP1-201ENST00000075430 ZC3H15Q8WU90 426 aaKnown RBP16.79■□□□□ 0.28
CTDP1-201ENST00000075430 HPS1Q92902 700 aa16.79■□□□□ 0.28
CTDP1-201ENST00000075430 CYP2S1Q96SQ9 504 aa16.79■□□□□ 0.28
CTDP1-201ENST00000075430 IGSF9Q9P2J2 1179 aa16.79■□□□□ 0.28
CTDP1-201ENST00000075430 CIDEBQ9UHD4 219 aa16.79■□□□□ 0.28
CTDP1-201ENST00000075430 ASB14A6NK59 587 aa16.78■□□□□ 0.28
CTDP1-201ENST00000075430 CFAP99D6REC4 459 aa16.78■□□□□ 0.28
CTDP1-201ENST00000075430 IPO13O94829 963 aaKnown RBP16.78■□□□□ 0.28
CTDP1-201ENST00000075430 APOA4P06727 396 aa16.78■□□□□ 0.28
CTDP1-201ENST00000075430 ALDOCP09972 364 aaKnown RBP16.78■□□□□ 0.28
CTDP1-201ENST00000075430 FAM163BP0C2L3 166 aa16.78■□□□□ 0.28
CTDP1-201ENST00000075430 PRSS56P0CW18 603 aa16.78■□□□□ 0.28
CTDP1-201ENST00000075430 NOS2P35228 1153 aa16.78■□□□□ 0.28
CTDP1-201ENST00000075430 SOX4Q06945 474 aaPredicted RBP16.78■□□□□ 0.28
CTDP1-201ENST00000075430 NCCRP1Q6ZVX7 275 aaPredicted RBP16.78■□□□□ 0.28
CTDP1-201ENST00000075430 ABI1Q8IZP0 508 aa16.78■□□□□ 0.28
CTDP1-201ENST00000075430 FBXO30Q8TB52 745 aa16.78■□□□□ 0.28
CTDP1-201ENST00000075430 DNAJB3Q8WWF6 145 aa16.78■□□□□ 0.28
CTDP1-201ENST00000075430 TBL1YQ9BQ87 522 aa16.78■□□□□ 0.28
CTDP1-201ENST00000075430 NT5MQ9NPB1 228 aa16.78■□□□□ 0.28
CTDP1-201ENST00000075430 PLK2Q9NYY3 685 aa16.78■□□□□ 0.28
CTDP1-201ENST00000075430 USP3Q9Y6I4 520 aa16.78■□□□□ 0.28
CTDP1-201ENST00000075430 UBXN8O00124 270 aa16.78■□□□□ 0.28
CTDP1-201ENST00000075430 CTSHP09668 335 aa16.78■□□□□ 0.28
CTDP1-201ENST00000075430 CAPN3P20807 821 aa16.78■□□□□ 0.28
CTDP1-201ENST00000075430 PRKACGP22612 351 aa16.78■□□□□ 0.28
CTDP1-201ENST00000075430 HALP42357 657 aa16.78■□□□□ 0.28
CTDP1-201ENST00000075430 GLUD2P49448 558 aa16.78■□□□□ 0.28
CTDP1-201ENST00000075430 MAPRE2Q15555 327 aa16.78■□□□□ 0.28
CTDP1-201ENST00000075430 C9orf57Q5W0N0 161 aa16.78■□□□□ 0.28
CTDP1-201ENST00000075430 PIWIL4Q7Z3Z4 852 aaKnown RBP16.78■□□□□ 0.28
CTDP1-201ENST00000075430 BLOC1S5Q8TDH9 187 aa16.78■□□□□ 0.28
CTDP1-201ENST00000075430 TFAP2CQ92754 450 aa16.78■□□□□ 0.28
CTDP1-201ENST00000075430 HERC2P3Q9BVR0 1158 aa16.78■□□□□ 0.28
CTDP1-201ENST00000075430 CASS4Q9NQ75 786 aa16.78■□□□□ 0.28
CTDP1-201ENST00000075430 TBC1D13Q9NVG8 400 aa16.78■□□□□ 0.28
CTDP1-201ENST00000075430 IFT80Q9P2H3 777 aaPredicted RBP16.78■□□□□ 0.28
CTDP1-201ENST00000075430 GMEB1Q9Y692 573 aa16.78■□□□□ 0.28
CTDP1-201ENST00000075430 SOCS7O14512 581 aa16.78■□□□□ 0.28
CTDP1-201ENST00000075430 UBFD1O14562 309 aaKnown RBP16.78■□□□□ 0.28
CTDP1-201ENST00000075430 GAS2O43903 313 aaKnown RBP16.78■□□□□ 0.28
CTDP1-201ENST00000075430 CYP2C9P11712 490 aa16.78■□□□□ 0.28
CTDP1-201ENST00000075430 TXNL4AP83876 142 aaKnown RBP16.78■□□□□ 0.28
CTDP1-201ENST00000075430 DPYSQ14117 519 aa16.78■□□□□ 0.28
CTDP1-201ENST00000075430 SQLEQ14534 574 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms