RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 IHHQ14623 411 aa14.07□□□□□ -0.16
USH1C-201ENST00000005226 UNC50Q53HI1 259 aa14.07□□□□□ -0.16
USH1C-201ENST00000005226 GPR107Q5VW38 600 aa14.07□□□□□ -0.16
USH1C-201ENST00000005226 DCLRE1AQ6PJP8 1040 aa14.07□□□□□ -0.16
USH1C-201ENST00000005226 ANKFN1Q8N957 763 aa14.07□□□□□ -0.16
USH1C-201ENST00000005226 KLHL5Q96PQ7 755 aa14.07□□□□□ -0.16
USH1C-201ENST00000005226 UPF3AQ9H1J1 476 aaKnown RBP14.07□□□□□ -0.16
USH1C-201ENST00000005226 CMTM6Q9NX76 183 aa14.07□□□□□ -0.16
USH1C-201ENST00000005226 OAZ3Q9UMX2 235 aa14.07□□□□□ -0.16
USH1C-201ENST00000005226 NEU3Q9UQ49 428 aa14.07□□□□□ -0.16
USH1C-201ENST00000005226 H0YJX3 145 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 CD247P20963 164 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 CCNCP24863 283 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 SLC5A3P53794 718 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 AIF1P55008 147 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 PMS2P3Q13401 168 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 PLCL1Q15111 1095 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 C8orf82Q6P1X6 216 aaPredicted RBP14.06□□□□□ -0.16
USH1C-201ENST00000005226 XKR5Q6UX68 686 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 RANBP10Q6VN20 620 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 C14orf80Q86SX3 495 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 DDIASQ8IXT1 998 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 SLC15A3Q8IY34 581 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 PTERQ96BW5 349 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 DCPSQ96C86 337 aaKnown RBP14.06□□□□□ -0.16
USH1C-201ENST00000005226 C19orf60Q96EN9 201 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 TSGA13Q96PP4 275 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 IL12RB2Q99665 862 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 ADI1Q9BV57 179 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 TSPYL2Q9H2G4 693 aaPredicted RBP14.06□□□□□ -0.16
USH1C-201ENST00000005226 VTA1Q9NP79 307 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 MRPL40Q9NQ50 206 aaKnown RBP14.06□□□□□ -0.16
USH1C-201ENST00000005226 MIOSQ9NXC5 875 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 DNAJC15Q9Y5T4 150 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 DHRS12A0PJE2 317 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 BOLA2-SMG1P6H3BVE0 249 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 XPOTO43592 962 aaKnown RBP14.06□□□□□ -0.16
USH1C-201ENST00000005226 PAGE1O75459 146 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 SUPT3HO75486 399 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 GJB3O75712 270 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 LINC00032P0C843 101 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 BMP2P12643 396 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 PSMD7P51665 324 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 FUT11Q495W5 492 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 FAM45BPQ6NSW5 357 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 FNDC8Q8TC99 324 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 FAM45AQ8TCE6 357 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 TOP1MTQ969P6 601 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 CIDEBQ9UHD4 219 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 CLEC11AQ9Y240 323 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 VWA7Q9Y334 891 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 TTC3P53804 2025 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 A0A1W2PPW3 197 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 CASTOR2A6NHX0 329 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 H3BMM5 538 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 PIP5K1BO14986 540 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 PSMD3O43242 534 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 BMP10O95393 424 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 STAMBPO95630 424 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 F9P00740 461 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 HSPA8P11142 646 aaKnown RBP14.06□□□□□ -0.16
USH1C-201ENST00000005226 IMPDH1P20839 514 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 CLCN2P51788 898 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 STX1BP61266 288 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 MERTKQ12866 999 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 UGT3A2Q3SY77 523 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 RABL3Q5HYI8 236 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 RAB41Q5JT25 222 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 ZNF678Q5SXM1 525 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 SCIMPQ6UWF3 145 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 ISCA2Q86U28 154 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 GPR180Q86V85 440 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 AFAP1L2Q8N4X5 818 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 DNAJB14Q8TBM8 379 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 HASPINQ8TF76 798 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 HDAC10Q969S8 669 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 VPS33AQ96AX1 596 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 PGAP3Q96FM1 320 aaPredicted RBP14.06□□□□□ -0.16
USH1C-201ENST00000005226 TMEM209Q96SK2 561 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 GAD1Q99259 594 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 OSBPL6Q9BZF3 934 aa14.06□□□□□ -0.16
USH1C-201ENST00000005226 CCM2LQ9NUG4 571 aaPredicted RBP14.06□□□□□ -0.16
USH1C-201ENST00000005226 MATN3O15232 486 aa14.05□□□□□ -0.16
USH1C-201ENST00000005226 INPP4BO15327 924 aa14.05□□□□□ -0.16
USH1C-201ENST00000005226 PAMP19021 973 aa14.05□□□□□ -0.16
USH1C-201ENST00000005226 GJA5P36382 358 aa14.05□□□□□ -0.16
USH1C-201ENST00000005226 GEMP55040 296 aa14.05□□□□□ -0.16
USH1C-201ENST00000005226 PSMD5Q16401 504 aa14.05□□□□□ -0.16
USH1C-201ENST00000005226 XKR4Q5GH76 650 aa14.05□□□□□ -0.16
USH1C-201ENST00000005226 KIAA0930Q6ICG6 404 aaPredicted RBP14.05□□□□□ -0.16
USH1C-201ENST00000005226 TMEM26Q6ZUK4 368 aa14.05□□□□□ -0.16
USH1C-201ENST00000005226 DPP9Q86TI2 863 aa14.05□□□□□ -0.16
USH1C-201ENST00000005226 LZTR1Q8N653 840 aa14.05□□□□□ -0.16
USH1C-201ENST00000005226 IRGQQ8WZA9 623 aa14.05□□□□□ -0.16
USH1C-201ENST00000005226 CDCA5Q96FF9 252 aa14.05□□□□□ -0.16
USH1C-201ENST00000005226 FAR2Q96K12 515 aa14.05□□□□□ -0.16
USH1C-201ENST00000005226 FCRL2Q96LA5 508 aaPredicted RBP14.05□□□□□ -0.16
USH1C-201ENST00000005226 MID1IP1Q9NPA3 183 aa14.05□□□□□ -0.16
USH1C-201ENST00000005226 NT5MQ9NPB1 228 aa14.05□□□□□ -0.16
USH1C-201ENST00000005226 TMLHEQ9NVH6 421 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms