RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Ca4Q64444 305 aa9.36□□□□□ -0.91
Col6a5-201ENSMUST00000165165 MarsQ68FL6 902 aaKnown RBP9.36□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Polr2mQ6P6I6 366 aa9.36□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Galnt7Q80VA0 657 aa9.36□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Spata20Q80YT5 790 aa9.36□□□□□ -0.91
Col6a5-201ENSMUST00000165165 C1qtnf7Q8BVD7 289 aa9.36□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Krt33aQ8K0Y2 404 aa9.36□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Lars2Q8VDC0 902 aa9.36□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Ndufs1Q91VD9 727 aaKnown RBP9.36□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Slc39a3Q99K24 317 aa9.36□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Krt88Q9CPR6 171 aa9.36□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Hnrnpa0Q9CX86 305 aaKnown RBP9.36□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Elp3Q9CZX0 547 aa9.36□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Atp7bQ64446 1462 aa9.36□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Smok3cA0A087WSF2 504 aa9.36□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Gm10436L7N1Y3 520 aa9.36□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Suv39h1O54864 412 aa9.36□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Tpst2O88856 376 aa9.36□□□□□ -0.91
Col6a5-201ENSMUST00000165165 DhfrP00375 187 aa9.36□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Ifrd1P19182 449 aa9.36□□□□□ -0.91
Col6a5-201ENSMUST00000165165 RxraP28700 467 aa9.36□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Ampd1Q3V1D3 745 aa9.36□□□□□ -0.91
Col6a5-201ENSMUST00000165165 MastlQ8C0P0 865 aa9.36□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Mfsd6Q8CBH5 775 aa9.36□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Angel1Q8VCU0 667 aa9.36□□□□□ -0.91
Col6a5-201ENSMUST00000165165 VarsQ9Z1Q9 1263 aaKnown RBP9.36□□□□□ -0.91
Col6a5-201ENSMUST00000165165 RptorQ8K4Q0 1335 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 KantrA0A1W2P7I0 76 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 AboP38649 332 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 TubP50586 505 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Rasa2P58069 847 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 C2cd2lQ80X80 706 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Fbxw8Q8BIA4 598 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Nae1Q8VBW6 534 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Mrpl21Q9D1N9 209 aaKnown RBP9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Itgb6Q9Z0T9 787 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Gm3239L7N2D9 227 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Psmd4O35226 376 aaKnown RBP9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Tuba1bP05213 451 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Myl4P09541 193 aaKnown RBP9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Stat5aP42230 793 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Eif5aP63242 154 aaKnown RBP9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Tuba1aP68369 451 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Grm6Q5NCH9 871 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Olfr792Q7TRH9 311 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Olfr392Q7TRX6 312 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Srp68Q8BMA6 625 aaKnown RBP9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Rbm4Q8C7Q4 361 aaKnown RBP9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Rbm4bQ8VE92 357 aaKnown RBP9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Asb12Q9D738 308 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Carm1Q9WVG6 608 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Ccdc74aE9Q9U8 364 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Ncam2O35136 837 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Eif2ak2Q03963 515 aaKnown RBP9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 LcorlQ3U285 600 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Gpd2Q64521 727 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Carns1Q6ZPS2 827 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Lsm8Q6ZWM4 96 aaKnown RBP9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Fam46bQ8C152 427 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Vps9d1Q8C190 649 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Senp2Q91ZX6 588 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Cstf1Q99LC2 431 aaKnown RBP9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 CatsperzQ9CQP8 194 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Lrrc69Q9D9Q0 347 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Gria4Q9Z2W8 902 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Prl7a1O54830 266 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Otol1Q4ZJM7 482 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Rab26Q504M8 260 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Slc44a5Q5RJI2 710 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Pan3Q640Q5 837 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Cyp2c29Q64458 490 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 4930503B20RikQ80ZP0 234 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Ankrd23Q812A3 306 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Elmo3Q8BYZ7 720 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Grsf1Q8C5Q4 479 aaKnown RBP9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Castor2Q8CAB8 329 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Abcg4Q91WA9 646 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Ssxb1Q9CPU1 170 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Fam212aQ9CX62 282 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Ripor3A1L3T7 938 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Etnk2A7MCT6 385 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Dhx15O35286 795 aaKnown RBP9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 OsmrO70458 971 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Itgb1P09055 798 aaKnown RBP9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Ppm1bP36993 390 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 PomkQ3TUA9 349 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Aste1Q8BIR2 672 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 AbraQ8BUZ1 375 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Fam25cQ8CF02 89 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Cacul1Q8R0X2 377 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Olfr853Q8VGG6 305 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Fam136aQ9CR98 138 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Oxct1Q9D0K2 520 aaKnown RBP9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Kcnn4O89109 425 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Ap5z1Q3U829 807 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Tars2Q3UQ84 723 aaKnown RBP9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Tbx2Q60707 711 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Sec24dQ6NXL1 1032 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Txndc15Q6P6J9 344 aa9.35□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Cachd1Q6PDJ1 1288 aa9.35□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 20 ms