RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Zmym5Q3U2E2 627 aa14.85□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Ankrd34bQ3UUF8 508 aa14.85□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Tmem237Q3V0J1 427 aa14.85□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Srek1ip1Q4V9W2 153 aa14.85□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Txndc15Q6P6J9 344 aa14.85□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Smpd4Q6ZPR5 823 aa14.85□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Prap1Q80XD8 149 aa14.85□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Wscd1Q80XH4 572 aa14.85□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Amigo1Q80ZD8 492 aa14.85□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Pcid2Q8BFV2 399 aaKnown RBP14.85□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Prox2Q8BII1 593 aa14.85□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Arhgef33Q8BW86 850 aa14.85□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Rdh12Q8BYK4 316 aa14.85□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 ScaiQ8C8N2 606 aa14.85□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Impg1Q8R1W8 798 aa14.85□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Olfr356Q8VFP5 315 aa14.85□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Olfr393Q8VGR6 312 aa14.85□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Pcdhga11Q91XY8 933 aa14.85□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Dok4Q99KE3 325 aa14.85□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Serpinb11Q9CQV3 388 aa14.85□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Tsga13Q9DA17 273 aa14.85□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Cyhr1Q9QXA1 311 aa14.85□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Hs6st3Q9QYK4 470 aa14.85□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Brca1P48754 1812 aa14.85□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Man1b1A2AJ15 658 aa14.84□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Zfp558E9Q1J0 407 aa14.84□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Znf683I7HJS4 458 aa14.84□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Gm21897J3KMP5 500 aa14.84□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Gm21750L7N228 499 aa14.84□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 JunbP09450 344 aaKnown RBP14.84□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Lmo2P25801 158 aa14.84□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 RxraP28700 467 aa14.84□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Hoxc11P31313 304 aa14.84□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Eif2ak2Q03963 515 aaKnown RBP14.84□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Dnajb14Q149L6 379 aa14.84□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Trappc9Q3U0M1 1148 aa14.84□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Lag3Q61790 521 aa14.84□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Adamts16Q69Z28 1222 aa14.84□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Far2Q7TNT2 515 aa14.84□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Zfp606Q7TSV0 794 aa14.84□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Ptbp3Q8BHD7 523 aaKnown RBP14.84□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Csde1Q91W50 798 aaKnown RBP14.84□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Cdc26Q99JP4 85 aa14.84□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Itgb3bpQ9CQ82 176 aa14.84□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Dhrs7Q9CXR1 338 aa14.84□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Ribc2Q9D4Q1 309 aa14.84□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Ten1Q9D7K2 161 aa14.84□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Ndst3Q9EQH7 873 aa14.84□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Tnfrsf10bQ9QZM4 381 aa14.84□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Rfc2Q9WUK4 349 aaKnown RBP14.84□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Scn1aA2APX8 2009 aa14.84□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Atn1O35126 1175 aa14.84□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 PtpraP18052 829 aa14.84□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 ArsaP50428 506 aa14.84□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Akr1c6P70694 323 aa14.84□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Sox8Q04886 464 aa14.84□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Tll1Q62381 1013 aa14.84□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Kir3dl2Q673W2 388 aa14.84□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Fnip1Q68FD7 1165 aa14.84□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Q6GQU0 248 aa14.84□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Znf821Q6PD05 413 aa14.84□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Scd4Q6T707 353 aa14.84□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Ssxb3Q6XAS4 170 aa14.84□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 AftphQ80WT5 931 aa14.84□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Nrde2Q80XC6 1172 aa14.84□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Ankrd45Q810N6 248 aa14.84□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 PdhxQ8BKZ9 501 aa14.84□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 ClmpQ8R373 373 aa14.84□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Pcdhb8Q91XZ2 779 aa14.84□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 AgkQ9ESW4 421 aa14.84□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Ly6iQ9WU67 134 aa14.84□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Rpl9-ps1S4R1R7 191 aa14.84□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 StrcQ8VIM6 1809 aa14.84□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Myo18aQ9JMH9 2050 aaKnown RBP14.84□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 PotegA5H0M4 473 aa14.83□□□□□ -0.04
Ushbp1-201ENSMUST00000049184 Vmn2r11E9Q4X4 861 aa14.83□□□□□ -0.04
Ushbp1-201ENSMUST00000049184 Gm17175E9Q528 179 aa14.83□□□□□ -0.04
Ushbp1-201ENSMUST00000049184 Spaca6E9Q8Q8 339 aa14.83□□□□□ -0.04
Ushbp1-201ENSMUST00000049184 Chrna4O70174 629 aa14.83□□□□□ -0.04
Ushbp1-201ENSMUST00000049184 Npr1P18293 1057 aa14.83□□□□□ -0.04
Ushbp1-201ENSMUST00000049184 Tlx1P43345 332 aa14.83□□□□□ -0.04
Ushbp1-201ENSMUST00000049184 Zscan26Q5RJ54 466 aa14.83□□□□□ -0.04
Ushbp1-201ENSMUST00000049184 Arcn1Q5XJY5 511 aaKnown RBP14.83□□□□□ -0.04
Ushbp1-201ENSMUST00000049184 Mapk4Q6P5G0 583 aa14.83□□□□□ -0.04
Ushbp1-201ENSMUST00000049184 SyncripQ7TMK9 623 aaKnown RBP14.83□□□□□ -0.04
Ushbp1-201ENSMUST00000049184 Krr1Q8BGA5 380 aaKnown RBP14.83□□□□□ -0.04
Ushbp1-201ENSMUST00000049184 4933402J07RikQ8BHX0 270 aa14.83□□□□□ -0.04
Ushbp1-201ENSMUST00000049184 Mterf1aQ8CHZ9 379 aa14.83□□□□□ -0.04
Ushbp1-201ENSMUST00000049184 Ints10Q8K2A7 710 aaKnown RBP14.83□□□□□ -0.04
Ushbp1-201ENSMUST00000049184 Rbmx2Q8R0F5 326 aaKnown RBP14.83□□□□□ -0.04
Ushbp1-201ENSMUST00000049184 Unc45aQ99KD5 944 aa14.83□□□□□ -0.04
Ushbp1-201ENSMUST00000049184 Chmp2aQ9DB34 222 aa14.83□□□□□ -0.04
Ushbp1-201ENSMUST00000049184 Adgra2Q91ZV8 1336 aa14.83□□□□□ -0.04
Ushbp1-201ENSMUST00000049184 Gm10720D3Z1I5 223 aa14.83□□□□□ -0.04
Ushbp1-201ENSMUST00000049184 Gimd1E9PW74 217 aa14.83□□□□□ -0.04
Ushbp1-201ENSMUST00000049184 Ceacam3E9Q6J4 706 aa14.83□□□□□ -0.04
Ushbp1-201ENSMUST00000049184 Cyp2w1E9Q816 493 aa14.83□□□□□ -0.04
Ushbp1-201ENSMUST00000049184 Sema3aO08665 772 aa14.83□□□□□ -0.04
Ushbp1-201ENSMUST00000049184 Fkbp7O54998 218 aa14.83□□□□□ -0.04
Ushbp1-201ENSMUST00000049184 Tuba3aP05214 450 aaKnown RBP14.83□□□□□ -0.04
Retrieved 100 of 22,080 RNA–protein pairs in 42.8 ms