RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Cndp1Q8BUG2 492 aa12.79□□□□□ -0.36
Clcn3-201ENSMUST00000004430 RtknQ8C6B2 564 aa12.79□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Traf7Q922B6 594 aa12.79□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Asah2Q9JHE3 756 aa12.79□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Rad21l1A2AU37 552 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Zyg11aA2BFL2 627 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Phf11cB4XVP9 339 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Vmn2r27D3YUK6 857 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Scamp3O35609 349 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Per1O35973 1291 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 NmbrO54799 390 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Syngr1O55100 234 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Orm2P07361 207 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 LtfP08071 707 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Gata6Q61169 589 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 PrkciQ62074 595 aaKnown RBP12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Olfr1037Q7TR84 321 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Nod1Q8BHB0 953 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 FicdQ8BIX9 458 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 IrgcQ8C262 412 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Impg1Q8R1W8 798 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Gfm2Q8R2Q4 779 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Fam20bQ8VCS3 409 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Nsmce2Q91VT1 247 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Scd3Q99PL7 359 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Sike1Q9CPR7 207 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Fbxl20Q9CZV8 436 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Il22bQ9JJY8 179 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Sf3b1Q99NB9 1304 aaKnown RBP12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Olfr1023A2ASU6 311 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Nipsnap3aB1AWZ3 247 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 A930018M24RikB7ZMY3 218 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Gm8922F6XVS9 199 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Vmn2r61L7N2B8 865 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Il1rnP25085 178 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Cyp2c39P56656 490 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Grid2Q61625 1007 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 PigaQ64323 485 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Mis18bp1Q80WQ8 998 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 N4bp2l2Q8JZS6 575 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Hkdc1Q91W97 915 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Dpy30Q99LT0 99 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 AadacQ99PG0 398 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Hmg20aQ9DC33 346 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Ngly1Q9JI78 651 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Pcdh7A0A0A6YY83 1255 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Lgr4A2ARI4 951 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Pex10B1AUE5 324 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 MttpO08601 894 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Hps1O08983 704 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Map2k3O09110 347 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Clk2O35491 499 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Hnf4aP49698 474 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Matn1P51942 500 aaKnown RBP12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 NcstnP57716 708 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Rnf157Q3TEL6 685 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Tmem63bQ3TWI9 832 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Rad54bQ6PFE3 886 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Tas2r115Q7M719 310 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Mtmr12Q80TA6 747 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Eif4bQ8BGD9 611 aaKnown RBP12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Eif3lQ8QZY1 564 aaKnown RBP12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Fam136aQ9CR98 138 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Snrnp48Q9D361 337 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Pi16Q9ET66 489 aa12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Habp4Q9JKS5 411 aaKnown RBP12.78□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Ssxb6A2BI74 170 aa12.77□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Olfr743L7N1Y2 311 aa12.77□□□□□ -0.36
Clcn3-201ENSMUST00000004430 S100a6P14069 89 aa12.77□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Cdh2P15116 906 aa12.77□□□□□ -0.36
Clcn3-201ENSMUST00000004430 CratP47934 626 aa12.77□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Stt3bQ3TDQ1 823 aa12.77□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Pik3r6Q3U6Q4 756 aa12.77□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Serpina3gQ5I2A0 440 aa12.77□□□□□ -0.36
Clcn3-201ENSMUST00000004430 CybbQ61093 570 aa12.77□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Eif2s1Q6ZWX6 315 aaKnown RBP12.77□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Hus1Q8BQY8 280 aa12.77□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Appl1Q8K3H0 707 aa12.77□□□□□ -0.36
Clcn3-201ENSMUST00000004430 CenpsQ9D084 142 aa12.77□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Ninj2Q9JL89 143 aa12.77□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Nupr1Q9WTK0 80 aa12.77□□□□□ -0.36
Clcn3-201ENSMUST00000004430 ApipQ9WVQ5 241 aa12.77□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Adam17Q9Z0F8 827 aa12.77□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Dhtkd1A2ATU0 921 aa12.77□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Zbtb10E9Q8X5 861 aa12.77□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Gria1P23818 907 aa12.77□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Akt1P31750 480 aa12.77□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Adamts10P58459 1104 aa12.77□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Psg28Q4KL66 472 aa12.77□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Smchd1Q6P5D8 2007 aaKnown RBP12.77□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Cgrrf1Q8BMJ7 332 aa12.77□□□□□ -0.36
Clcn3-201ENSMUST00000004430 ItpkaQ8R071 459 aa12.77□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Tcf7l2Q924A0 459 aa12.77□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Ecrg4Q99LS0 148 aa12.77□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Q9D1Z2 194 aa12.77□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Pik3cgQ9JHG7 1102 aa12.77□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Tnfsf13bQ9WU72 309 aa12.77□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Rps6kb2Q9Z1M4 485 aa12.77□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Slfn9B1ARD6 910 aa12.77□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Mroh5E9PUJ8 762 aa12.77□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 37.2 ms