RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Micall2Q3TN34 1009 aa16.49■□□□□ 0.23
Shh-201ENSMUST00000002708 Gpr162Q3UN16 588 aa16.49■□□□□ 0.23
Shh-201ENSMUST00000002708 Lsmem1Q3UQS2 128 aa16.49■□□□□ 0.23
Shh-201ENSMUST00000002708 Kansl1lQ5DTI6 991 aa16.49■□□□□ 0.23
Shh-201ENSMUST00000002708 Arcn1Q5XJY5 511 aaKnown RBP16.49■□□□□ 0.23
Shh-201ENSMUST00000002708 Gprc5aQ8BHL4 356 aa16.49■□□□□ 0.23
Shh-201ENSMUST00000002708 Rbm22Q8BHS3 420 aaKnown RBP16.49■□□□□ 0.23
Shh-201ENSMUST00000002708 Slc44a2Q8BY89 706 aa16.49■□□□□ 0.23
Shh-201ENSMUST00000002708 Tmem154Q8C4Q9 181 aa16.49■□□□□ 0.23
Shh-201ENSMUST00000002708 Mrpl47Q8K2Y7 252 aa16.49■□□□□ 0.23
Shh-201ENSMUST00000002708 Sult5a1Q91X36 291 aa16.49■□□□□ 0.23
Shh-201ENSMUST00000002708 Rad51cQ924H5 366 aa16.49■□□□□ 0.23
Shh-201ENSMUST00000002708 Rwdd4Q9CPR1 188 aa16.49■□□□□ 0.23
Shh-201ENSMUST00000002708 Oxct2bQ9ESL0 520 aa16.49■□□□□ 0.23
Shh-201ENSMUST00000002708 Oxct2aQ9JJN4 520 aa16.49■□□□□ 0.23
Shh-201ENSMUST00000002708 Vmn1r3A2AMT7 306 aa16.48■□□□□ 0.23
Shh-201ENSMUST00000002708 Kctd18E0CZ26 429 aa16.48■□□□□ 0.23
Shh-201ENSMUST00000002708 Slc2a3P32037 493 aaKnown RBP16.48■□□□□ 0.23
Shh-201ENSMUST00000002708 TubP50586 505 aa16.48■□□□□ 0.23
Shh-201ENSMUST00000002708 Sephs2P97364 452 aa16.48■□□□□ 0.23
Shh-201ENSMUST00000002708 Nr1h2Q60644 446 aa16.48■□□□□ 0.23
Shh-201ENSMUST00000002708 Crtc1Q68ED7 630 aa16.48■□□□□ 0.23
Shh-201ENSMUST00000002708 RbfaQ6P3B9 350 aa16.48■□□□□ 0.23
Shh-201ENSMUST00000002708 Tatdn1Q6P8M1 295 aa16.48■□□□□ 0.23
Shh-201ENSMUST00000002708 Scd4Q6T707 353 aa16.48■□□□□ 0.23
Shh-201ENSMUST00000002708 Ssxb3Q6XAS4 170 aa16.48■□□□□ 0.23
Shh-201ENSMUST00000002708 Peli3Q8BXR6 445 aa16.48■□□□□ 0.23
Shh-201ENSMUST00000002708 CtbsQ8R242 366 aa16.48■□□□□ 0.23
Shh-201ENSMUST00000002708 Vmn1r79Q8R285 306 aa16.48■□□□□ 0.23
Shh-201ENSMUST00000002708 Olfr1494Q8VGP8 315 aa16.48■□□□□ 0.23
Shh-201ENSMUST00000002708 Pcdhb11Q91UZ8 797 aa16.48■□□□□ 0.23
Shh-201ENSMUST00000002708 Efcab9Q9DAM2 216 aa16.48■□□□□ 0.23
Shh-201ENSMUST00000002708 CtsmQ9JL96 333 aa16.48■□□□□ 0.23
Shh-201ENSMUST00000002708 Cyhr1Q9QXA1 311 aa16.48■□□□□ 0.23
Shh-201ENSMUST00000002708 Fbxo17Q9QZM8 286 aa16.48■□□□□ 0.23
Shh-201ENSMUST00000002708 H2afyQ9QZQ8 372 aaKnown RBP16.48■□□□□ 0.23
Shh-201ENSMUST00000002708 Syt5Q9R0N5 386 aa16.48■□□□□ 0.23
Shh-201ENSMUST00000002708 Supt3B0QZW4 406 aa16.48■□□□□ 0.23
Shh-201ENSMUST00000002708 Olfr596F8VQ26 312 aa16.48■□□□□ 0.23
Shh-201ENSMUST00000002708 Slc11a2P49282 568 aa16.48■□□□□ 0.23
Shh-201ENSMUST00000002708 Echdc2Q3TLP5 296 aa16.48■□□□□ 0.23
Shh-201ENSMUST00000002708 Lrrc47Q505F5 581 aaKnown RBP16.48■□□□□ 0.23
Shh-201ENSMUST00000002708 Far2Q7TNT2 515 aa16.48■□□□□ 0.23
Shh-201ENSMUST00000002708 TpbglQ8C013 384 aa16.48■□□□□ 0.23
Shh-201ENSMUST00000002708 Slc46a2Q8CA03 479 aa16.48■□□□□ 0.23
Shh-201ENSMUST00000002708 Kif19Q99PT9 997 aa16.48■□□□□ 0.23
Shh-201ENSMUST00000002708 Trhr2Q9ERT2 382 aa16.48■□□□□ 0.23
Shh-201ENSMUST00000002708 1600015I10RikE9Q745 711 aa16.47■□□□□ 0.23
Shh-201ENSMUST00000002708 Olfr743L7N1Y2 311 aa16.47■□□□□ 0.23
Shh-201ENSMUST00000002708 Gria2P23819 883 aa16.47■□□□□ 0.23
Shh-201ENSMUST00000002708 Dlx2P40764 332 aa16.47■□□□□ 0.23
Shh-201ENSMUST00000002708 Ebf1Q07802 591 aa16.47■□□□□ 0.23
Shh-201ENSMUST00000002708 PepdQ11136 493 aa16.47■□□□□ 0.23
Shh-201ENSMUST00000002708 Parp3Q3ULW8 533 aa16.47■□□□□ 0.23
Shh-201ENSMUST00000002708 Fam120bQ6RI63 786 aa16.47■□□□□ 0.23
Shh-201ENSMUST00000002708 Ccdc116Q80X53 541 aa16.47■□□□□ 0.23
Shh-201ENSMUST00000002708 Lair1Q8BG84 263 aa16.47■□□□□ 0.23
Shh-201ENSMUST00000002708 Kank2Q8BX02 843 aa16.47■□□□□ 0.23
Shh-201ENSMUST00000002708 Slc47a1Q8K0H1 567 aa16.47■□□□□ 0.23
Shh-201ENSMUST00000002708 Abhd11Q8K4F5 307 aa16.47■□□□□ 0.23
Shh-201ENSMUST00000002708 Dclre1cQ8K4J0 705 aa16.47■□□□□ 0.23
Shh-201ENSMUST00000002708 Mrps2Q924T2 291 aaKnown RBP16.47■□□□□ 0.23
Shh-201ENSMUST00000002708 Homer2Q9QWW1 354 aa16.47■□□□□ 0.23
Shh-201ENSMUST00000002708 Itgb1bp2Q9R000 350 aa16.47■□□□□ 0.23
Shh-201ENSMUST00000002708 Gm3002E9PW72 216 aa16.47■□□□□ 0.23
Shh-201ENSMUST00000002708 Gm8257E9Q8R3 264 aa16.47■□□□□ 0.23
Shh-201ENSMUST00000002708 Epb41P48193 858 aa16.47■□□□□ 0.23
Shh-201ENSMUST00000002708 Lrig1P70193 1091 aa16.47■□□□□ 0.23
Shh-201ENSMUST00000002708 SirpaP97797 513 aa16.47■□□□□ 0.23
Shh-201ENSMUST00000002708 Tp53i13Q5F267 385 aa16.47■□□□□ 0.23
Shh-201ENSMUST00000002708 Rnf145Q5SWK7 663 aa16.47■□□□□ 0.23
Shh-201ENSMUST00000002708 Rtl3Q6P1Y1 553 aa16.47■□□□□ 0.23
Shh-201ENSMUST00000002708 Cxcr1Q810W6 351 aa16.47■□□□□ 0.23
Shh-201ENSMUST00000002708 Nup54Q8BTS4 510 aaKnown RBP16.47■□□□□ 0.23
Shh-201ENSMUST00000002708 Mob2Q8VI63 235 aa16.47■□□□□ 0.23
Shh-201ENSMUST00000002708 Tfap2dQ91ZK0 452 aa16.47■□□□□ 0.23
Shh-201ENSMUST00000002708 Adam33Q923W9 797 aa16.47■□□□□ 0.23
Shh-201ENSMUST00000002708 Atp6v1g1Q9CR51 118 aa16.47■□□□□ 0.23
Shh-201ENSMUST00000002708 CenpsQ9D084 142 aa16.47■□□□□ 0.23
Shh-201ENSMUST00000002708 Kif12Q9D2Z8 642 aa16.47■□□□□ 0.23
Shh-201ENSMUST00000002708 Cacng3Q9JJV5 315 aa16.47■□□□□ 0.23
Shh-201ENSMUST00000002708 Cngb3Q9JJZ9 694 aa16.47■□□□□ 0.23
Shh-201ENSMUST00000002708 St6galnac1Q9QZ39 526 aa16.47■□□□□ 0.23
Shh-201ENSMUST00000002708 Slc6a21A0A1B0GSD2 748 aa16.46■□□□□ 0.23
Shh-201ENSMUST00000002708 SmoktcrA2KF29 484 aa16.46■□□□□ 0.23
Shh-201ENSMUST00000002708 Tmem245B1AZA5 876 aa16.46■□□□□ 0.23
Shh-201ENSMUST00000002708 Gm3259D3YUK0 475 aa16.46■□□□□ 0.23
Shh-201ENSMUST00000002708 Kdelc2G5E897 503 aa16.46■□□□□ 0.23
Shh-201ENSMUST00000002708 MrasO08989 208 aa16.46■□□□□ 0.23
Shh-201ENSMUST00000002708 Fpr-rs3O88537 343 aa16.46■□□□□ 0.23
Shh-201ENSMUST00000002708 Svs4P18419 113 aa16.46■□□□□ 0.23
Shh-201ENSMUST00000002708 CcnfP51944 777 aa16.46■□□□□ 0.23
Shh-201ENSMUST00000002708 Hbq1bQ3U0A6 142 aa16.46■□□□□ 0.23
Shh-201ENSMUST00000002708 Arhgap17Q3UIA2 846 aa16.46■□□□□ 0.23
Shh-201ENSMUST00000002708 Fam83fQ3UKU4 495 aa16.46■□□□□ 0.23
Shh-201ENSMUST00000002708 Afap1l2Q5DTU0 825 aa16.46■□□□□ 0.23
Shh-201ENSMUST00000002708 Il15raQ60819 263 aa16.46■□□□□ 0.23
Shh-201ENSMUST00000002708 MogQ61885 246 aa16.46■□□□□ 0.23
Shh-201ENSMUST00000002708 Olfr20Q7TRX9 314 aa16.46■□□□□ 0.23
Shh-201ENSMUST00000002708 Zfp606Q7TSV0 794 aa16.46■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 99.5 ms