RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 C2CD4AQ8NCU7 369 aaPredicted RBP14.66□□□□□ -0.06
SCARB2-221ENST00000640341 DLG3Q92796 817 aa14.66□□□□□ -0.06
SCARB2-221ENST00000640341 ESAMQ96AP7 390 aa14.66□□□□□ -0.06
SCARB2-221ENST00000640341 TBATAQ96M53 351 aa14.66□□□□□ -0.06
SCARB2-221ENST00000640341 NSUN5Q96P11 429 aaKnown RBP14.66□□□□□ -0.06
SCARB2-221ENST00000640341 RGS18Q9NS28 235 aa14.66□□□□□ -0.06
SCARB2-221ENST00000640341 VWA7Q9Y334 891 aa14.66□□□□□ -0.06
SCARB2-221ENST00000640341 RAD54BQ9Y620 910 aa14.66□□□□□ -0.06
SCARB2-221ENST00000640341 IRAK2O43187 625 aa14.66□□□□□ -0.06
SCARB2-221ENST00000640341 NRP2O60462 931 aa14.66□□□□□ -0.06
SCARB2-221ENST00000640341 COL6A2P12110 1019 aa14.66□□□□□ -0.06
SCARB2-221ENST00000640341 INHBCP55103 352 aa14.66□□□□□ -0.06
SCARB2-221ENST00000640341 DDR2Q16832 855 aa14.66□□□□□ -0.06
SCARB2-221ENST00000640341 TECRLQ5HYJ1 363 aa14.66□□□□□ -0.06
SCARB2-221ENST00000640341 RAB41Q5JT25 222 aa14.66□□□□□ -0.06
SCARB2-221ENST00000640341 GNASQ5JWF2 1037 aa14.66□□□□□ -0.06
SCARB2-221ENST00000640341 OVOS1Q6IE37 1185 aa14.66□□□□□ -0.06
SCARB2-221ENST00000640341 SPATA2LQ8IUW3 424 aaPredicted RBP14.66□□□□□ -0.06
SCARB2-221ENST00000640341 FAM47BQ8NA70 645 aa14.66□□□□□ -0.06
SCARB2-221ENST00000640341 TUBGCP3Q96CW5 907 aa14.66□□□□□ -0.06
SCARB2-221ENST00000640341 UNC93B1Q9H1C4 597 aa14.66□□□□□ -0.06
SCARB2-221ENST00000640341 ZNF385DQ9H6B1 395 aa14.66□□□□□ -0.06
SCARB2-221ENST00000640341 NMUR1Q9HB89 426 aa14.66□□□□□ -0.06
SCARB2-221ENST00000640341 UXTQ9UBK9 157 aaPredicted RBP14.66□□□□□ -0.06
SCARB2-221ENST00000640341 FAM50BQ9Y247 325 aa14.66□□□□□ -0.06
SCARB2-221ENST00000640341 A0A1W2PQH9 124 aa14.65□□□□□ -0.06
SCARB2-221ENST00000640341 PSMD3O43242 534 aa14.65□□□□□ -0.06
SCARB2-221ENST00000640341 TSPAN3O60637 253 aa14.65□□□□□ -0.06
SCARB2-221ENST00000640341 CNTN5O94779 1100 aa14.65□□□□□ -0.06
SCARB2-221ENST00000640341 LINC00032P0C843 101 aa14.65□□□□□ -0.06
SCARB2-221ENST00000640341 GPR15P49685 360 aa14.65□□□□□ -0.06
SCARB2-221ENST00000640341 SERPINH1P50454 418 aaKnown RBP14.65□□□□□ -0.06
SCARB2-221ENST00000640341 XKR4Q5GH76 650 aa14.65□□□□□ -0.06
SCARB2-221ENST00000640341 AGMOQ6ZNB7 445 aa14.65□□□□□ -0.06
SCARB2-221ENST00000640341 DHFR2Q86XF0 187 aa14.65□□□□□ -0.06
SCARB2-221ENST00000640341 ZNF786Q8N393 782 aa14.65□□□□□ -0.06
SCARB2-221ENST00000640341 PSMG2Q969U7 264 aa14.65□□□□□ -0.06
SCARB2-221ENST00000640341 UPF3AQ9H1J1 476 aaKnown RBP14.65□□□□□ -0.06
SCARB2-221ENST00000640341 IRAK4Q9NWZ3 460 aa14.65□□□□□ -0.06
SCARB2-221ENST00000640341 A0A087X1B8 175 aa14.65□□□□□ -0.06
SCARB2-221ENST00000640341 AP3B1O00203 1094 aa14.65□□□□□ -0.06
SCARB2-221ENST00000640341 ODC1P11926 461 aa14.65□□□□□ -0.06
SCARB2-221ENST00000640341 FOXA1P55317 472 aa14.65□□□□□ -0.06
SCARB2-221ENST00000640341 TMED1Q13445 227 aa14.65□□□□□ -0.06
SCARB2-221ENST00000640341 GALNT3Q14435 633 aa14.65□□□□□ -0.06
SCARB2-221ENST00000640341 LIMS2Q7Z4I7 341 aa14.65□□□□□ -0.06
SCARB2-221ENST00000640341 TMEM86AQ8N2M4 240 aa14.65□□□□□ -0.06
SCARB2-221ENST00000640341 PTGR2Q8N8N7 351 aaPredicted RBP14.65□□□□□ -0.06
SCARB2-221ENST00000640341 TRPC4APQ8TEL6 797 aa14.65□□□□□ -0.06
SCARB2-221ENST00000640341 HMCESQ96FZ2 354 aa14.65□□□□□ -0.06
SCARB2-221ENST00000640341 RTP3Q9BQQ7 232 aa14.65□□□□□ -0.06
SCARB2-221ENST00000640341 DCUN1D5Q9BTE7 237 aa14.65□□□□□ -0.06
SCARB2-221ENST00000640341 MRPS26Q9BYN8 205 aaKnown RBP14.65□□□□□ -0.06
SCARB2-221ENST00000640341 HS3ST4Q9Y661 456 aa14.65□□□□□ -0.06
SCARB2-221ENST00000640341 MYADML2A6NDP7 307 aa14.64□□□□□ -0.07
SCARB2-221ENST00000640341 UBXN8O00124 270 aa14.64□□□□□ -0.07
SCARB2-221ENST00000640341 NPHS1O60500 1241 aa14.64□□□□□ -0.07
SCARB2-221ENST00000640341 ZNF26P17031 533 aaPredicted RBP14.64□□□□□ -0.07
SCARB2-221ENST00000640341 PRKAA2P54646 552 aa14.64□□□□□ -0.07
SCARB2-221ENST00000640341 YBX1P67809 324 aaKnown RBP14.64□□□□□ -0.07
SCARB2-221ENST00000640341 EFEMP1Q12805 493 aa14.64□□□□□ -0.07
SCARB2-221ENST00000640341 IKBKEQ14164 716 aa14.64□□□□□ -0.07
SCARB2-221ENST00000640341 SQLEQ14534 574 aa14.64□□□□□ -0.07
SCARB2-221ENST00000640341 MARC1Q5VT66 337 aa14.64□□□□□ -0.07
SCARB2-221ENST00000640341 DNAJB14Q8TBM8 379 aa14.64□□□□□ -0.07
SCARB2-221ENST00000640341 SEMA4BQ9NPR2 832 aaPredicted RBP14.64□□□□□ -0.07
SCARB2-221ENST00000640341 TIMM22Q9Y584 194 aa14.64□□□□□ -0.07
SCARB2-221ENST00000640341 ARL5AQ9Y689 179 aa14.64□□□□□ -0.07
SCARB2-221ENST00000640341 PTCH2Q9Y6C5 1203 aa14.64□□□□□ -0.07
SCARB2-221ENST00000640341 PFDN1O60925 122 aa14.64□□□□□ -0.07
SCARB2-221ENST00000640341 SOAT2O75908 522 aa14.64□□□□□ -0.07
SCARB2-221ENST00000640341 CD52P31358 61 aa14.64□□□□□ -0.07
SCARB2-221ENST00000640341 SLC39A12Q504Y0 691 aa14.64□□□□□ -0.07
SCARB2-221ENST00000640341 TMEM207Q6UWW9 146 aa14.64□□□□□ -0.07
SCARB2-221ENST00000640341 RANBP10Q6VN20 620 aa14.64□□□□□ -0.07
SCARB2-221ENST00000640341 C19orf60Q96EN9 201 aa14.64□□□□□ -0.07
SCARB2-221ENST00000640341 PGAP3Q96FM1 320 aaPredicted RBP14.64□□□□□ -0.07
SCARB2-221ENST00000640341 AGO3Q9H9G7 860 aaKnown RBP14.64□□□□□ -0.07
SCARB2-221ENST00000640341 PREBQ9HCU5 417 aa14.64□□□□□ -0.07
SCARB2-221ENST00000640341 CNOT6Q9ULM6 557 aaKnown RBP14.64□□□□□ -0.07
SCARB2-221ENST00000640341 RNF11Q9Y3C5 154 aa14.64□□□□□ -0.07
SCARB2-221ENST00000640341 PLXNA1Q9UIW2 1896 aa14.64□□□□□ -0.07
SCARB2-221ENST00000640341 DOCK3Q8IZD9 2030 aa14.64□□□□□ -0.07
SCARB2-221ENST00000640341 A0A0J9YYE9 177 aa14.64□□□□□ -0.07
SCARB2-221ENST00000640341 BAIAP3O94812 1187 aa14.64□□□□□ -0.07
SCARB2-221ENST00000640341 ASLP04424 464 aa14.64□□□□□ -0.07
SCARB2-221ENST00000640341 GNAO1P09471 354 aa14.64□□□□□ -0.07
SCARB2-221ENST00000640341 MAPK10P53779 464 aa14.64□□□□□ -0.07
SCARB2-221ENST00000640341 LRP8Q14114 963 aa14.64□□□□□ -0.07
SCARB2-221ENST00000640341 MAPRE2Q15555 327 aa14.64□□□□□ -0.07
SCARB2-221ENST00000640341 PSMD5Q16401 504 aa14.64□□□□□ -0.07
SCARB2-221ENST00000640341 ALFQ53S48 1182 aa14.64□□□□□ -0.07
SCARB2-221ENST00000640341 TBCELQ5QJ74 424 aa14.64□□□□□ -0.07
SCARB2-221ENST00000640341 CYGBQ8WWM9 190 aa14.64□□□□□ -0.07
SCARB2-221ENST00000640341 PBXIP1Q96AQ6 731 aa14.64□□□□□ -0.07
SCARB2-221ENST00000640341 MS4A4AQ96JQ5 239 aa14.64□□□□□ -0.07
SCARB2-221ENST00000640341 IL12RB2Q99665 862 aa14.64□□□□□ -0.07
SCARB2-221ENST00000640341 AKTIPQ9H8T0 292 aa14.64□□□□□ -0.07
SCARB2-221ENST00000640341 RRN3Q9NYV6 651 aa14.64□□□□□ -0.07
SCARB2-221ENST00000640341 ANGPT2O15123 496 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms