RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 TAF11Q15544 211 aa4.84□□□□□ -1.63
CCDC7-216ENST00000640058 OASLQ15646 514 aaKnown RBP4.84□□□□□ -1.63
CCDC7-216ENST00000640058 NFIL3Q16649 462 aa4.84□□□□□ -1.63
CCDC7-216ENST00000640058 ATP13A5Q4VNC0 1218 aa4.84□□□□□ -1.63
CCDC7-216ENST00000640058 MAP3K21Q5TCX8 1036 aa4.84□□□□□ -1.63
CCDC7-216ENST00000640058 SMIM29Q86T20 159 aa4.84□□□□□ -1.63
CCDC7-216ENST00000640058 TADA2BQ86TJ2 420 aa4.84□□□□□ -1.63
CCDC7-216ENST00000640058 SFR1Q86XK3 245 aa4.84□□□□□ -1.63
CCDC7-216ENST00000640058 MAB21L3Q8N8X9 362 aa4.84□□□□□ -1.63
CCDC7-216ENST00000640058 LMNTD1Q8N9Z9 388 aa4.84□□□□□ -1.63
CCDC7-216ENST00000640058 RND1Q92730 232 aa4.84□□□□□ -1.63
CCDC7-216ENST00000640058 SNAPC3Q92966 411 aa4.84□□□□□ -1.63
CCDC7-216ENST00000640058 ZSCAN31Q96LW9 406 aaPredicted RBP4.84□□□□□ -1.63
CCDC7-216ENST00000640058 BBS4Q96RK4 519 aa4.84□□□□□ -1.63
CCDC7-216ENST00000640058 HEMGNQ9BXL5 484 aa4.84□□□□□ -1.63
CCDC7-216ENST00000640058 PPCSQ9HAB8 311 aa4.84□□□□□ -1.63
CCDC7-216ENST00000640058 UBTD1Q9HAC8 227 aa4.84□□□□□ -1.63
CCDC7-216ENST00000640058 DDX4Q9NQI0 724 aaKnown RBP4.84□□□□□ -1.63
CCDC7-216ENST00000640058 SMYD2Q9NRG4 433 aa4.84□□□□□ -1.63
CCDC7-216ENST00000640058 KIAA1456Q9P272 454 aa4.84□□□□□ -1.63
CCDC7-216ENST00000640058 VDAC3Q9Y277 283 aa4.84□□□□□ -1.63
CCDC7-216ENST00000640058 CARD8Q9Y2G2 431 aa4.84□□□□□ -1.63
CCDC7-216ENST00000640058 GPR52Q9Y2T5 361 aa4.84□□□□□ -1.63
CCDC7-216ENST00000640058 SP1P08047 785 aa4.83□□□□□ -1.64
CCDC7-216ENST00000640058 ETFAP13804 333 aa4.83□□□□□ -1.64
CCDC7-216ENST00000640058 KCNA5P22460 613 aa4.83□□□□□ -1.64
CCDC7-216ENST00000640058 EFNB1P98172 346 aa4.83□□□□□ -1.64
CCDC7-216ENST00000640058 EFR3AQ14156 821 aa4.83□□□□□ -1.64
CCDC7-216ENST00000640058 NEDD9Q14511 834 aa4.83□□□□□ -1.64
CCDC7-216ENST00000640058 KBTBD3Q8NAB2 608 aa4.83□□□□□ -1.64
CCDC7-216ENST00000640058 TNIP2Q8NFZ5 429 aa4.83□□□□□ -1.64
CCDC7-216ENST00000640058 FIG4Q92562 907 aa4.83□□□□□ -1.64
CCDC7-216ENST00000640058 TMEM19Q96HH6 336 aa4.83□□□□□ -1.64
CCDC7-216ENST00000640058 ZNF570Q96NI8 536 aa4.83□□□□□ -1.64
CCDC7-216ENST00000640058 KXD1Q9BQD3 176 aa4.83□□□□□ -1.64
CCDC7-216ENST00000640058 RIC8AQ9NPQ8 531 aa4.83□□□□□ -1.64
CCDC7-216ENST00000640058 NFE2L3Q9Y4A8 694 aa4.83□□□□□ -1.64
CCDC7-216ENST00000640058 ATXN2Q99700 1313 aaKnown RBP4.82□□□□□ -1.64
CCDC7-216ENST00000640058 PRR23AA6NEV1 266 aa4.82□□□□□ -1.64
CCDC7-216ENST00000640058 PRSS47A8MTI9 375 aa4.82□□□□□ -1.64
CCDC7-216ENST00000640058 MID1O15344 667 aa4.82□□□□□ -1.64
CCDC7-216ENST00000640058 PLRG1O43660 514 aaKnown RBP4.82□□□□□ -1.64
CCDC7-216ENST00000640058 TACC1O75410 805 aa4.82□□□□□ -1.64
CCDC7-216ENST00000640058 URODP06132 367 aa4.82□□□□□ -1.64
CCDC7-216ENST00000640058 GALTP07902 379 aa4.82□□□□□ -1.64
CCDC7-216ENST00000640058 G6PDP11413 515 aa4.82□□□□□ -1.64
CCDC7-216ENST00000640058 CHATP28329 748 aa4.82□□□□□ -1.64
CCDC7-216ENST00000640058 PGM1P36871 562 aa4.82□□□□□ -1.64
CCDC7-216ENST00000640058 EIF2S3P41091 472 aaKnown RBP4.82□□□□□ -1.64
CCDC7-216ENST00000640058 EFNA5P52803 228 aa4.82□□□□□ -1.64
CCDC7-216ENST00000640058 UBE3AQ05086 875 aa4.82□□□□□ -1.64
CCDC7-216ENST00000640058 BBS12Q6ZW61 710 aa4.82□□□□□ -1.64
CCDC7-216ENST00000640058 SATL1Q86VE3 508 aa4.82□□□□□ -1.64
CCDC7-216ENST00000640058 CPOQ8IVL8 374 aa4.82□□□□□ -1.64
CCDC7-216ENST00000640058 SPATA22Q8NHS9 363 aa4.82□□□□□ -1.64
CCDC7-216ENST00000640058 FEM1CQ96JP0 617 aa4.82□□□□□ -1.64
CCDC7-216ENST00000640058 ISCA1Q9BUE6 129 aa4.82□□□□□ -1.64
CCDC7-216ENST00000640058 EBF2Q9HAK2 575 aa4.82□□□□□ -1.64
CCDC7-216ENST00000640058 CNGB3Q9NQW8 809 aa4.82□□□□□ -1.64
CCDC7-216ENST00000640058 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.82□□□□□ -1.64
CCDC7-216ENST00000640058 RCOR1Q9UKL0 485 aa4.82□□□□□ -1.64
CCDC7-216ENST00000640058 ZNF587BE7ETH6 402 aa4.81□□□□□ -1.64
CCDC7-216ENST00000640058 IFNL4K9M1U5 179 aa4.81□□□□□ -1.64
CCDC7-216ENST00000640058 TIPRLO75663 272 aa4.81□□□□□ -1.64
CCDC7-216ENST00000640058 CLCN3P51790 818 aa4.81□□□□□ -1.64
CCDC7-216ENST00000640058 RBBP5Q15291 538 aaKnown RBP4.81□□□□□ -1.64
CCDC7-216ENST00000640058 FBXO46Q6PJ61 603 aaPredicted RBP4.81□□□□□ -1.64
CCDC7-216ENST00000640058 GDPD4Q6W3E5 623 aa4.81□□□□□ -1.64
CCDC7-216ENST00000640058 CCNI2Q6ZMN8 369 aaPredicted RBP4.81□□□□□ -1.64
CCDC7-216ENST00000640058 TDRPQ86YL5 185 aa4.81□□□□□ -1.64
CCDC7-216ENST00000640058 FOXP4Q8IVH2 680 aaPredicted RBP4.81□□□□□ -1.64
CCDC7-216ENST00000640058 DCUN1D3Q8IWE4 304 aa4.81□□□□□ -1.64
CCDC7-216ENST00000640058 DHX40Q8IX18 779 aaKnown RBP4.81□□□□□ -1.64
CCDC7-216ENST00000640058 ODF3L1Q8IXM7 274 aa4.81□□□□□ -1.64
CCDC7-216ENST00000640058 DSELQ8IZU8 1212 aa4.81□□□□□ -1.64
CCDC7-216ENST00000640058 SCCPDHQ8NBX0 429 aa4.81□□□□□ -1.64
CCDC7-216ENST00000640058 FBXL8Q96CD0 374 aa4.81□□□□□ -1.64
CCDC7-216ENST00000640058 LBHD1Q9BQE6 289 aaPredicted RBP4.81□□□□□ -1.64
CCDC7-216ENST00000640058 HAUS8Q9BT25 410 aa4.81□□□□□ -1.64
CCDC7-216ENST00000640058 INTS2Q9H0H0 1204 aaKnown RBP4.81□□□□□ -1.64
CCDC7-216ENST00000640058 C17orf75Q9HAS0 396 aa4.81□□□□□ -1.64
CCDC7-216ENST00000640058 C1RLQ9NZP8 487 aa4.81□□□□□ -1.64
CCDC7-216ENST00000640058 TINAGQ9UJW2 476 aa4.81□□□□□ -1.64
CCDC7-216ENST00000640058 EIF3FO00303 357 aaPredicted RBP4.8□□□□□ -1.64
CCDC7-216ENST00000640058 CRYAAP02489 173 aa4.8□□□□□ -1.64
CCDC7-216ENST00000640058 CYC1P08574 325 aa4.8□□□□□ -1.64
CCDC7-216ENST00000640058 SRCP12931 536 aa4.8□□□□□ -1.64
CCDC7-216ENST00000640058 GPTP24298 496 aa4.8□□□□□ -1.64
CCDC7-216ENST00000640058 GPD2P43304 727 aa4.8□□□□□ -1.64
CCDC7-216ENST00000640058 CCR5P51681 352 aa4.8□□□□□ -1.64
CCDC7-216ENST00000640058 FUT6P51993 359 aa4.8□□□□□ -1.64
CCDC7-216ENST00000640058 CDH15P55291 814 aa4.8□□□□□ -1.64
CCDC7-216ENST00000640058 ECT2LQ008S8 904 aa4.8□□□□□ -1.64
CCDC7-216ENST00000640058 SLC20A2Q08357 652 aa4.8□□□□□ -1.64
CCDC7-216ENST00000640058 TROAPQ12815 778 aa4.8□□□□□ -1.64
CCDC7-216ENST00000640058 EIF2S3LQ2VIR3 472 aaKnown RBP4.8□□□□□ -1.64
CCDC7-216ENST00000640058 PPP6R3Q5H9R7 873 aaPredicted RBP4.8□□□□□ -1.64
CCDC7-216ENST00000640058 LCE1EQ5T753 118 aa4.8□□□□□ -1.64
CCDC7-216ENST00000640058 ANKRD54Q6NXT1 300 aa4.8□□□□□ -1.64
CCDC7-216ENST00000640058 TMEM81Q6P7N7 255 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms