RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 ZNF470Q6ECI4 717 aa19.41■□□□□ 0.7
CACNA1A-257ENST00000638009 TMEM143Q96AN5 459 aa19.41■□□□□ 0.7
CACNA1A-257ENST00000638009 EXOC2Q96KP1 924 aa19.41■□□□□ 0.7
CACNA1A-257ENST00000638009 SCN2AQ99250 2005 aa19.41■□□□□ 0.7
CACNA1A-257ENST00000638009 ACAT2Q9BWD1 397 aa19.41■□□□□ 0.7
CACNA1A-257ENST00000638009 TLX3O43711 291 aaPredicted RBP19.41■□□□□ 0.7
CACNA1A-257ENST00000638009 TIE1P35590 1138 aa19.41■□□□□ 0.7
CACNA1A-257ENST00000638009 TOB2Q14106 344 aaPredicted RBP19.41■□□□□ 0.7
CACNA1A-257ENST00000638009 MFSD10Q14728 455 aa19.41■□□□□ 0.7
CACNA1A-257ENST00000638009 ITGA11Q9UKX5 1188 aa19.41■□□□□ 0.7
CACNA1A-257ENST00000638009 RPH3AQ9Y2J0 694 aaPredicted RBP19.41■□□□□ 0.7
CACNA1A-257ENST00000638009 SPEF2Q9C093 1822 aa19.41■□□□□ 0.7
CACNA1A-257ENST00000638009 TEX13CA0A0J9YWL9 993 aa19.41■□□□□ 0.7
CACNA1A-257ENST00000638009 NAMPTP43490 491 aa19.41■□□□□ 0.7
CACNA1A-257ENST00000638009 RGS19P49795 217 aa19.41■□□□□ 0.7
CACNA1A-257ENST00000638009 FAM91A1Q658Y4 838 aa19.41■□□□□ 0.7
CACNA1A-257ENST00000638009 TNKS2Q9H2K2 1166 aa19.41■□□□□ 0.7
CACNA1A-257ENST00000638009 IPO13O94829 963 aaKnown RBP19.41■□□□□ 0.7
CACNA1A-257ENST00000638009 PRAMEF17Q5VTA0 474 aa19.41■□□□□ 0.7
CACNA1A-257ENST00000638009 TCF12Q99081 682 aa19.41■□□□□ 0.7
CACNA1A-257ENST00000638009 MOCS1Q9NZB8 636 aa19.41■□□□□ 0.7
CACNA1A-257ENST00000638009 SLC27A6Q9Y2P4 619 aa19.41■□□□□ 0.7
CACNA1A-257ENST00000638009 ALDH5A1P51649 535 aaPredicted RBP19.41■□□□□ 0.7
CACNA1A-257ENST00000638009 MTRRQ9UBK8 725 aa19.41■□□□□ 0.7
CACNA1A-257ENST00000638009 ANXA2P2A6NMY6 339 aa19.41■□□□□ 0.7
CACNA1A-257ENST00000638009 TTC34A8MYJ7 566 aa19.41■□□□□ 0.7
CACNA1A-257ENST00000638009 IFNA21P01568 189 aa19.41■□□□□ 0.7
CACNA1A-257ENST00000638009 ANXA2P07355 339 aaKnown RBP19.41■□□□□ 0.7
CACNA1A-257ENST00000638009 ASMTP46597 345 aa19.41■□□□□ 0.7
CACNA1A-257ENST00000638009 METTL16Q86W50 562 aaKnown RBP19.41■□□□□ 0.7
CACNA1A-257ENST00000638009 OR2L8Q8NGY9 312 aa19.41■□□□□ 0.7
CACNA1A-257ENST00000638009 DNAAF2Q9NVR5 837 aaKnown RBP19.41■□□□□ 0.7
CACNA1A-257ENST00000638009 C15orf59Q2T9L4 293 aaPredicted RBP19.41■□□□□ 0.7
CACNA1A-257ENST00000638009 FNBP1LQ5T0N5 605 aa19.41■□□□□ 0.7
CACNA1A-257ENST00000638009 SLC30A8Q8IWU4 369 aa19.41■□□□□ 0.7
CACNA1A-257ENST00000638009 HOPXQ9BPY8 73 aaPredicted RBP19.41■□□□□ 0.7
CACNA1A-257ENST00000638009 POMKQ9H5K3 350 aa19.41■□□□□ 0.7
CACNA1A-257ENST00000638009 ENY2Q9NPA8 101 aa19.41■□□□□ 0.7
CACNA1A-257ENST00000638009 CBX4O00257 560 aa19.4■□□□□ 0.7
CACNA1A-257ENST00000638009 NAGLUP54802 743 aa19.4■□□□□ 0.7
CACNA1A-257ENST00000638009 HSDL2Q6YN16 418 aa19.4■□□□□ 0.7
CACNA1A-257ENST00000638009 ZNF563Q8TA94 476 aa19.4■□□□□ 0.7
CACNA1A-257ENST00000638009 TBL1YQ9BQ87 522 aa19.4■□□□□ 0.7
CACNA1A-257ENST00000638009 LARS2Q15031 903 aaKnown RBP19.4■□□□□ 0.7
CACNA1A-257ENST00000638009 PAMR1Q6UXH9 720 aa19.4■□□□□ 0.7
CACNA1A-257ENST00000638009 NOA1Q8NC60 698 aaKnown RBP19.4■□□□□ 0.7
CACNA1A-257ENST00000638009 RABL2AQ9UBK7 228 aaPredicted RBP19.4■□□□□ 0.7
CACNA1A-257ENST00000638009 RABL2BQ9UNT1 228 aa19.4■□□□□ 0.7
CACNA1A-257ENST00000638009 BRWD1Q9NSI6 2320 aa19.4■□□□□ 0.7
CACNA1A-257ENST00000638009 A0A0G2JMP0 313 aa19.4■□□□□ 0.7
CACNA1A-257ENST00000638009 OTCP00480 354 aa19.4■□□□□ 0.7
CACNA1A-257ENST00000638009 OVOS1Q6IE37 1185 aa19.4■□□□□ 0.7
CACNA1A-257ENST00000638009 OR4M2Q8NGB6 313 aa19.4■□□□□ 0.7
CACNA1A-257ENST00000638009 FBXO30Q8TB52 745 aa19.4■□□□□ 0.7
CACNA1A-257ENST00000638009 MAGEA6P43360 314 aa19.4■□□□□ 0.7
CACNA1A-257ENST00000638009 PIWIL4Q7Z3Z4 852 aaKnown RBP19.4■□□□□ 0.7
CACNA1A-257ENST00000638009 PIH1D3Q9NQM4 214 aaKnown RBP19.4■□□□□ 0.7
CACNA1A-257ENST00000638009 DOPEY2Q9Y3R5 2298 aa19.4■□□□□ 0.7
CACNA1A-257ENST00000638009 ATMINO43313 823 aaPredicted RBP19.4■□□□□ 0.7
CACNA1A-257ENST00000638009 THP07101 528 aa19.4■□□□□ 0.7
CACNA1A-257ENST00000638009 GNALP38405 381 aa19.4■□□□□ 0.7
CACNA1A-257ENST00000638009 MLLT6P55198 1093 aaPredicted RBP19.4■□□□□ 0.7
CACNA1A-257ENST00000638009 SERPINB11Q96P15 392 aa19.4■□□□□ 0.7
CACNA1A-257ENST00000638009 CLIC5Q9NZA1 410 aa19.4■□□□□ 0.7
CACNA1A-257ENST00000638009 SLC9A3R1O14745 358 aaPredicted RBP19.4■□□□□ 0.7
CACNA1A-257ENST00000638009 MIPEPQ99797 713 aa19.4■□□□□ 0.7
CACNA1A-257ENST00000638009 RBM22Q9NW64 420 aaKnown RBP eCLIP19.4■□□□□ 0.7
CACNA1A-257ENST00000638009 CSN2P05814 226 aa19.39■□□□□ 0.7
CACNA1A-257ENST00000638009 SPARCP09486 303 aa19.39■□□□□ 0.7
CACNA1A-257ENST00000638009 PFKFB4Q16877 469 aa19.39■□□□□ 0.7
CACNA1A-257ENST00000638009 MAGEE1Q9HCI5 957 aa19.39■□□□□ 0.7
CACNA1A-257ENST00000638009 CKAP5Q14008 2032 aa19.39■□□□□ 0.7
CACNA1A-257ENST00000638009 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.39■□□□□ 0.7
CACNA1A-257ENST00000638009 CEP76Q8TAP6 659 aa19.39■□□□□ 0.7
CACNA1A-257ENST00000638009 CIPCQ9C0C6 399 aa19.39■□□□□ 0.7
CACNA1A-257ENST00000638009 PIM2Q9P1W9 311 aa19.39■□□□□ 0.7
CACNA1A-257ENST00000638009 LMBRD2Q68DH5 695 aaPredicted RBP19.39■□□□□ 0.69
CACNA1A-257ENST00000638009 HEXDCQ8WVB3 486 aa19.39■□□□□ 0.69
CACNA1A-257ENST00000638009 KAT2BQ92831 832 aa19.39■□□□□ 0.69
CACNA1A-257ENST00000638009 SMARCD1Q96GM5 515 aa19.39■□□□□ 0.69
CACNA1A-257ENST00000638009 HCN3Q9P1Z3 774 aa19.39■□□□□ 0.69
CACNA1A-257ENST00000638009 ABCD2Q9UBJ2 740 aa19.39■□□□□ 0.69
CACNA1A-257ENST00000638009 HEG1Q9ULI3 1381 aa19.39■□□□□ 0.69
CACNA1A-257ENST00000638009 TDP2O95551 362 aa19.39■□□□□ 0.69
CACNA1A-257ENST00000638009 LTFP02788 710 aa19.39■□□□□ 0.69
CACNA1A-257ENST00000638009 IQSEC1Q6DN90 963 aa19.39■□□□□ 0.69
CACNA1A-257ENST00000638009 PCDH12Q9NPG4 1184 aa19.39■□□□□ 0.69
CACNA1A-257ENST00000638009 FADS2P1A8MWK0 482 aa19.39■□□□□ 0.69
CACNA1A-257ENST00000638009 ADAMDEC1O15204 470 aa19.39■□□□□ 0.69
CACNA1A-257ENST00000638009 RIPK2O43353 540 aa19.39■□□□□ 0.69
CACNA1A-257ENST00000638009 PGRP06401 933 aa19.39■□□□□ 0.69
CACNA1A-257ENST00000638009 RPA3P35244 121 aaPredicted RBP19.39■□□□□ 0.69
CACNA1A-257ENST00000638009 CTSKP43235 329 aa19.39■□□□□ 0.69
CACNA1A-257ENST00000638009 BORAQ6PGQ7 559 aa19.39■□□□□ 0.69
CACNA1A-257ENST00000638009 SHC4Q6S5L8 630 aa19.39■□□□□ 0.69
CACNA1A-257ENST00000638009 ART5Q96L15 291 aa19.39■□□□□ 0.69
CACNA1A-257ENST00000638009 DNAJC28Q9NX36 388 aa19.39■□□□□ 0.69
CACNA1A-257ENST00000638009 WDR37Q9Y2I8 494 aa19.39■□□□□ 0.69
CACNA1A-257ENST00000638009 REXO2Q9Y3B8 237 aaKnown RBP19.39■□□□□ 0.69
CACNA1A-257ENST00000638009 IFNA2P01563 188 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms