RNA–Protein interactions for RNA: ENST00000637625.1

CACNA1A-244, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 1,890 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-244ENST00000637625 IFFO1Q0D2I5 559 aa12.94□□□□□ -0.34
CACNA1A-244ENST00000637625 PLA2G4EQ3MJ16 856 aa12.94□□□□□ -0.34
CACNA1A-244ENST00000637625 ARL13BQ3SXY8 428 aa12.94□□□□□ -0.34
CACNA1A-244ENST00000637625 HLA-DQA1Q5Y7H0 255 aa12.94□□□□□ -0.34
CACNA1A-244ENST00000637625 SLCO6A1Q86UG4 719 aa12.94□□□□□ -0.34
CACNA1A-244ENST00000637625 VSIG1Q86XK7 387 aa12.94□□□□□ -0.34
CACNA1A-244ENST00000637625 COLGALT1Q8NBJ5 622 aa12.94□□□□□ -0.34
CACNA1A-244ENST00000637625 BBOF1Q8ND07 529 aa12.94□□□□□ -0.34
CACNA1A-244ENST00000637625 ZNF689Q96CS4 500 aaPredicted RBP12.94□□□□□ -0.34
CACNA1A-244ENST00000637625 YME1L1Q96TA2 773 aa12.94□□□□□ -0.34
CACNA1A-244ENST00000637625 SH3GL2Q99962 352 aa12.94□□□□□ -0.34
CACNA1A-244ENST00000637625 SIK2Q9H0K1 926 aa12.94□□□□□ -0.34
CACNA1A-244ENST00000637625 RC3H2Q9HBD1 1191 aaKnown RBP12.94□□□□□ -0.34
CACNA1A-244ENST00000637625 MTRRQ9UBK8 725 aa12.94□□□□□ -0.34
CACNA1A-244ENST00000637625 SCML2Q9UQR0 700 aa12.94□□□□□ -0.34
CACNA1A-244ENST00000637625 RAXQ9Y2V3 346 aa12.94□□□□□ -0.34
CACNA1A-244ENST00000637625 NFS1Q9Y697 457 aa12.94□□□□□ -0.34
CACNA1A-244ENST00000637625 ATP23Q9Y6H3 246 aa12.94□□□□□ -0.34
CACNA1A-244ENST00000637625 ZNF487B1APH4 448 aa12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 RIPK2O43353 540 aa12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 TMEM63AO94886 807 aa12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 IGLV3-25P01717 112 aa12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 HAPLN1P10915 354 aaPredicted RBP12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 ZFXP17010 805 aaPredicted RBP12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 CHRNA4P43681 627 aa12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 CAV1Q03135 178 aa12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 PPARDQ03181 441 aa12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 SCAPQ12770 1279 aa12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 DPYSQ14117 519 aa12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 SLC29A2Q14542 456 aa12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 SLMAPQ14BN4 828 aa12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 TMPRSS7Q7RTY8 843 aa12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 PSTKQ8IV42 348 aaKnown RBP12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 CDKL3Q8IVW4 592 aaPredicted RBP12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 MIER2Q8N344 545 aa12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 CCDC110Q8TBZ0 833 aa12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 CPT1BQ92523 772 aa12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 PRCCQ92733 491 aaPredicted RBP12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 C9orf72Q96LT7 481 aa12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 LGMNQ99538 433 aa12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 PABPC3Q9H361 631 aaKnown RBP12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 SMOC2Q9H3U7 446 aa12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 XPO7Q9UIA9 1087 aaKnown RBP12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 SHROOM3Q8TF72 1996 aa12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 SH3BP5O60239 455 aa12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 TBX18O95935 607 aa12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 F9P00740 461 aa12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 LPLP06858 475 aa12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 HMBSP08397 361 aa12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 SRGAP2BP0DMP2 458 aa12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 RARGP13631 454 aa12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 ERCC2P18074 760 aa12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 ENDOUP21128 410 aaKnown RBP12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 YWHAQP27348 245 aa12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 EFEMP1Q12805 493 aa12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 TAF10Q12962 218 aa12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 FASTKD3Q14CZ7 662 aaKnown RBP12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 KRT71Q3SY84 523 aa12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 SLC45A4Q5BKX6 768 aa12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 DNAJC21Q5F1R6 531 aaKnown RBP12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 RNF168Q8IYW5 571 aaPredicted RBP12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 SLC39A11Q8N1S5 342 aa12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 PPM1NQ8N819 430 aa12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 DEPDC1BQ8WUY9 529 aa12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 QKIQ96PU8 341 aaKnown RBP eCLIP12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 RBM15Q96T37 977 aaKnown RBP eCLIP12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 TRIM62Q9BVG3 475 aa12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 FAM129AQ9BZQ8 928 aa12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 FBXO44Q9H4M3 255 aa12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 USP29Q9HBJ7 922 aa12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 SAYSD1Q9NPB0 183 aa12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 NINJ2Q9NZG7 142 aa12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 SEPT10Q9P0V9 454 aa12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 BCCIPQ9P287 314 aaKnown RBP eCLIP12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 RCOR3Q9P2K3 495 aaPredicted RBP12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 OR12D3Q9UGF7 316 aa12.93□□□□□ -0.34
CACNA1A-244ENST00000637625 DCLK1O15075 740 aa12.92□□□□□ -0.34
CACNA1A-244ENST00000637625 EFEMP2O95967 443 aa12.92□□□□□ -0.34
CACNA1A-244ENST00000637625 EPHB2P29323 1055 aa12.92□□□□□ -0.34
CACNA1A-244ENST00000637625 GLUD2P49448 558 aa12.92□□□□□ -0.34
CACNA1A-244ENST00000637625 AP1B1Q10567 949 aa12.92□□□□□ -0.34
CACNA1A-244ENST00000637625 SEMA3BQ13214 749 aa12.92□□□□□ -0.34
CACNA1A-244ENST00000637625 MORF4L2Q15014 288 aa12.92□□□□□ -0.34
CACNA1A-244ENST00000637625 KYNUQ16719 465 aa12.92□□□□□ -0.34
CACNA1A-244ENST00000637625 RWDD4Q6NW29 188 aaKnown RBP12.92□□□□□ -0.34
CACNA1A-244ENST00000637625 LRIG3Q6UXM1 1119 aa12.92□□□□□ -0.34
CACNA1A-244ENST00000637625 MIB1Q86YT6 1006 aa12.92□□□□□ -0.34
CACNA1A-244ENST00000637625 ZZZ3Q8IYH5 903 aa12.92□□□□□ -0.34
CACNA1A-244ENST00000637625 ZCCHC9Q8N567 271 aaKnown RBP12.92□□□□□ -0.34
CACNA1A-244ENST00000637625 NPWQ8N729 165 aa12.92□□□□□ -0.34
CACNA1A-244ENST00000637625 CLSTN3Q9BQT9 956 aa12.92□□□□□ -0.34
CACNA1A-244ENST00000637625 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.92□□□□□ -0.34
CACNA1A-244ENST00000637625 BCLAF3A2AJT9 711 aaKnown RBP12.91□□□□□ -0.34
CACNA1A-244ENST00000637625 GOLGA6L10A6NI86 522 aa12.91□□□□□ -0.34
CACNA1A-244ENST00000637625 SLC38A8A6NNN8 435 aa12.91□□□□□ -0.34
CACNA1A-244ENST00000637625 GOLGA8KD6RF30 607 aa12.91□□□□□ -0.34
CACNA1A-244ENST00000637625 SEC24AO95486 1093 aa12.91□□□□□ -0.34
CACNA1A-244ENST00000637625 ACTN2P35609 894 aa12.91□□□□□ -0.34
CACNA1A-244ENST00000637625 SLCO1A2P46721 670 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms