RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 VCX3AQ9NNX9 186 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 THAP1Q9NVV9 213 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 FBXO5Q9UKT4 447 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 ORC6Q9Y5N6 252 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 PRPF4O43172 522 aaKnown RBP eCLIP5.55□□□□□ -1.52
CHD2-227ENST00000637572 SLC7A4O43246 635 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 NDUFS2O75306 463 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 EPOP01588 193 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 ELFN1P0C7U0 828 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 CASP2P42575 452 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 GPR1P46091 355 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 ANXA11P50995 505 aaKnown RBP5.55□□□□□ -1.52
CHD2-227ENST00000637572 IRAK1P51617 712 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 ERVK-21P61565 698 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 DSC1Q08554 894 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 SF3A3Q12874 501 aaKnown RBP eCLIP5.55□□□□□ -1.527e-11■■■■□ 19.6
CHD2-227ENST00000637572 MTM1Q13496 603 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 SERINC3Q13530 473 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 C16orf89Q6UX73 402 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 ADCK2Q7Z695 626 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 ZNF567Q8N184 647 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 CFAP52Q8N1V2 620 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 FBXO39Q8N4B4 442 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 FAM160A2Q8N612 972 aaPredicted RBP5.55□□□□□ -1.52
CHD2-227ENST00000637572 TNIP2Q8NFZ5 429 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 OR56A4Q8NGH8 313 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 BRSK1Q8TDC3 778 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 CLEC4CQ8WTT0 213 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 STARD8Q92502 1023 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 CPT1BQ92523 772 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 PSMG2Q969U7 264 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 ARMC5Q96C12 935 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 HMCESQ96FZ2 354 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 KLF6Q99612 283 aaPredicted RBP5.55□□□□□ -1.52
CHD2-227ENST00000637572 TRMT61BQ9BVS5 477 aaKnown RBP5.55□□□□□ -1.52
CHD2-227ENST00000637572 SLC7A5P2Q9GIP4 190 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 MRPL46Q9H2W6 279 aaKnown RBP5.55□□□□□ -1.52
CHD2-227ENST00000637572 COL4A1P02462 1669 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 COL4A5P29400 1685 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 CACNB4O00305 520 aaPredicted RBP5.55□□□□□ -1.52
CHD2-227ENST00000637572 ABLIM1O14639 778 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 USP12O75317 370 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 OGNP20774 298 aaKnown RBP5.55□□□□□ -1.52
CHD2-227ENST00000637572 CXCR2P25025 360 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 SERPINB5P36952 375 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 SPAM1P38567 509 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 CRYMQ14894 314 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 EIF4HQ15056 248 aaKnown RBP5.55□□□□□ -1.52
CHD2-227ENST00000637572 FAM133BQ5BKY9 247 aaKnown RBP5.55□□□□□ -1.52
CHD2-227ENST00000637572 C4orf48Q5BLP8 95 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 MS4A13Q5J8X5 152 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 SEL1L3Q68CR1 1132 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 RFWD3Q6PCD5 774 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 BRAT1Q6PJG6 821 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 NXPE4Q6UWF7 544 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 UNC5AQ6ZN44 842 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 ZNF598Q86UK7 904 aaKnown RBP5.55□□□□□ -1.52
CHD2-227ENST00000637572 TDRPQ86YL5 185 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 OR10T2Q8NGX3 314 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 GRIN3AQ8TCU5 1115 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 ZNF473Q8WTR7 871 aaKnown RBP5.55□□□□□ -1.52
CHD2-227ENST00000637572 LRIG1Q96JA1 1093 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 SMAD5Q99717 465 aaKnown RBP5.55□□□□□ -1.52
CHD2-227ENST00000637572 LPIN3Q9BQK8 851 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 TRMOQ9BU70 441 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 ASPSCR1Q9BZE9 553 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 POLMQ9NP87 494 aaPredicted RBP5.55□□□□□ -1.52
CHD2-227ENST00000637572 PHPT1Q9NRX4 125 aaPredicted RBP5.55□□□□□ -1.52
CHD2-227ENST00000637572 RAB23Q9ULC3 237 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 R3HDM2Q9Y2K5 976 aaKnown RBP5.55□□□□□ -1.52
CHD2-227ENST00000637572 HS3ST4Q9Y661 456 aa5.55□□□□□ -1.52
CHD2-227ENST00000637572 FASNP49327 2511 aaKnown RBP5.55□□□□□ -1.52
CHD2-227ENST00000637572 LRRC72A6NJI9 287 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 PRMT5O14744 637 aaPredicted RBP5.54□□□□□ -1.52
CHD2-227ENST00000637572 BIRC5O15392 142 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 CD3EAPO15446 510 aaKnown RBP5.54□□□□□ -1.52
CHD2-227ENST00000637572 TEX28O15482 410 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 MGEA5O60502 916 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 NBNO60934 754 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 ATG13O75143 517 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 DGKIO75912 1065 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 S1PR4O95977 384 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 ANXA5P08758 320 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 ADH5P11766 374 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 ENO3P13929 434 aaPredicted RBP5.54□□□□□ -1.52
CHD2-227ENST00000637572 SLC2A4P14672 509 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 ETS1P14921 441 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 ARHGDIAP52565 204 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 RAB10P61026 200 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 IFI35P80217 286 aaPredicted RBP5.54□□□□□ -1.52
CHD2-227ENST00000637572 CYP4F8P98187 520 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 CACNG1Q06432 222 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 FAAP100Q0VG06 881 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 SMAD1Q15797 465 aaKnown RBP5.54□□□□□ -1.52
CHD2-227ENST00000637572 PAGE2BQ5JRK9 111 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 SPDYAQ5MJ70 313 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 N4BP2L1Q5TBK1 243 aaPredicted RBP5.54□□□□□ -1.52
CHD2-227ENST00000637572 NCBP2-AS2Q69YL0 99 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 TMC5Q6UXY8 1006 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 PHACTR4Q8IZ21 702 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms