RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 ADAMTS6Q9UKP5 1117 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 NDUFAF1Q9Y375 327 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 GMEB1Q9Y692 573 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 REV3LO60673 3130 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 E2F8A0AVK6 867 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 PQBP1O60828 265 aaKnown RBP4□□□□□ -1.77
SCN1A-214ENST00000637038 EGFRP00533 1210 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 LTFP02788 710 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 SNRPB2P08579 225 aaKnown RBP4□□□□□ -1.77
SCN1A-214ENST00000637038 CCDC166P0CW27 439 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 PTPN1P18031 435 aaKnown RBP4□□□□□ -1.77
SCN1A-214ENST00000637038 KCNA5P22460 613 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 PPM1AP35813 382 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 GRIA1P42261 906 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 ATP4BP51164 291 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 SLC10A2Q12908 348 aaPredicted RBP4□□□□□ -1.77
SCN1A-214ENST00000637038 TRIM25Q14258 630 aaKnown RBP4□□□□□ -1.77
SCN1A-214ENST00000637038 MAPRE1Q15691 268 aaKnown RBP4□□□□□ -1.77
SCN1A-214ENST00000637038 AMHR2Q16671 573 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 SOWAHAQ2M3V2 549 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 ARL13AQ5H913 290 aaPredicted RBP4□□□□□ -1.77
SCN1A-214ENST00000637038 TREML2Q5T2D2 321 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 VWA5B1Q5TIE3 1220 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 ZBTB49Q6ZSB9 765 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 LPCAT2Q7L5N7 544 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 CAMK1DQ8IU85 385 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 PHTF2Q8N3S3 785 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 GOLM1Q8NBJ4 401 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 IPMKQ8NFU5 416 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 STYXQ8WUJ0 223 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 ROPN1LQ96C74 230 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 NPY6RQ99463 290 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 PRPF18Q99633 342 aaKnown RBP4□□□□□ -1.77
SCN1A-214ENST00000637038 TINF2Q9BSI4 451 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 KIFC1Q9BW19 673 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 GRIP2Q9C0E4 1043 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 PIDD1Q9HB75 910 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 ZBTB26Q9HCK0 441 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 VPS45Q9NRW7 570 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 TBC1D23Q9NUY8 699 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 TUBA8Q9NY65 449 aaPredicted RBP4□□□□□ -1.77
SCN1A-214ENST00000637038 CLIC5Q9NZA1 410 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 PKD2L2Q9NZM6 624 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 MAGED2Q9UNF1 606 aaPredicted RBP4□□□□□ -1.77
SCN1A-214ENST00000637038 GNEQ9Y223 722 aaKnown RBP4□□□□□ -1.77
SCN1A-214ENST00000637038 MTF2Q9Y483 593 aaPredicted RBP4□□□□□ -1.77
SCN1A-214ENST00000637038 TRIOBPQ9H2D6 2365 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 RNF103-CHMP3A0A140T963 221 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 DFFAO00273 331 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 ZBTB24O43167 697 aaPredicted RBP4□□□□□ -1.77
SCN1A-214ENST00000637038 HNRNPRO43390 633 aaKnown RBP4□□□□□ -1.77
SCN1A-214ENST00000637038 LAMTOR5O43504 91 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 AKAP10O43572 662 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 ZMPSTE24O75844 475 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 UPP2O95045 317 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 ARIH2O95376 493 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 PGM3O95394 542 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 ESRRBO95718 433 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 ASLP04424 464 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 MYL3P08590 195 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 LTA4HP09960 611 aaKnown RBP4□□□□□ -1.77
SCN1A-214ENST00000637038 CCNCP24863 283 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 EPHA3P29320 983 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 RPL34P49207 117 aaKnown RBP4□□□□□ -1.77
SCN1A-214ENST00000637038 THOP1P52888 689 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 TPD52P55327 224 aaPredicted RBP4□□□□□ -1.77
SCN1A-214ENST00000637038 PKNOX1P55347 436 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 NSUN2Q08J23 767 aaKnown RBP eCLIP4□□□□□ -1.77
SCN1A-214ENST00000637038 GALNT2Q10471 571 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 AGKQ53H12 422 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 IYDQ6PHW0 289 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 DCLRE1AQ6PJP8 1040 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 UGT2A3Q6UWM9 527 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 HACD2Q6Y1H2 254 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 GPR142Q7Z601 462 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 SATL1Q86VE3 508 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 ZNF354CQ86Y25 554 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 THEM5Q8N1Q8 247 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 KCTD4Q8WVF5 259 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 ARNTL2Q8WYA1 636 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 USP13Q92995 863 aaPredicted RBP4□□□□□ -1.77
SCN1A-214ENST00000637038 EMID1Q96A84 441 aaPredicted RBP4□□□□□ -1.77
SCN1A-214ENST00000637038 SMARCD1Q96GM5 515 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 PIWIL1Q96J94 861 aaKnown RBP4□□□□□ -1.77
SCN1A-214ENST00000637038 TEKT5Q96M29 485 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 SLC2A13Q96QE2 648 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 TCF12Q99081 682 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 HOPXQ9BPY8 73 aaPredicted RBP4□□□□□ -1.77
SCN1A-214ENST00000637038 TMEM79Q9BSE2 394 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 FICDQ9BVA6 458 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 R3HDMLQ9H3Y0 253 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 POMKQ9H5K3 350 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 CLK4Q9HAZ1 481 aaKnown RBP4□□□□□ -1.77
SCN1A-214ENST00000637038 MAN1C1Q9NR34 630 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 FNIP2Q9P278 1114 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 XPR1Q9UBH6 696 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 APPL1Q9UKG1 709 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 SLC8A2Q9UPR5 921 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 SNX13Q9Y5W8 968 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 MIA3Q5JRA6 1907 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms