RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 NEMP1O14524 444 aa16.07■□□□□ 0.16
CLN6-216ENST00000636876 TSPAN6O43657 245 aa16.07■□□□□ 0.16
CLN6-216ENST00000636876 AGTP01019 485 aa16.07■□□□□ 0.16
CLN6-216ENST00000636876 ATXN1LP0C7T5 689 aaKnown RBP16.07■□□□□ 0.16
CLN6-216ENST00000636876 TBC1D3HP0C7X1 549 aa16.07■□□□□ 0.16
CLN6-216ENST00000636876 HLA-DPA1P20036 260 aa16.07■□□□□ 0.16
CLN6-216ENST00000636876 VIPR1P32241 457 aa16.07■□□□□ 0.16
CLN6-216ENST00000636876 CHRNA4P43681 627 aa16.07■□□□□ 0.16
CLN6-216ENST00000636876 FAM193AP78312 1265 aa16.07■□□□□ 0.16
CLN6-216ENST00000636876 RPL6Q02878 288 aaKnown RBP16.07■□□□□ 0.16
CLN6-216ENST00000636876 SLC1A5Q15758 541 aa16.07■□□□□ 0.16
CLN6-216ENST00000636876 TMEM52BQ4KMG9 183 aa16.07■□□□□ 0.16
CLN6-216ENST00000636876 SIRPB2Q5JXA9 342 aa16.07■□□□□ 0.16
CLN6-216ENST00000636876 TBC1D3GQ6DHY5 549 aa16.07■□□□□ 0.16
CLN6-216ENST00000636876 TBC1D3CQ6IPX1 549 aa16.07■□□□□ 0.16
CLN6-216ENST00000636876 CCDC70Q6NSX1 233 aa16.07■□□□□ 0.16
CLN6-216ENST00000636876 NEK5Q6P3R8 708 aa16.07■□□□□ 0.16
CLN6-216ENST00000636876 ZC3H14Q6PJT7 736 aaKnown RBP16.07■□□□□ 0.16
CLN6-216ENST00000636876 RANBP10Q6VN20 620 aa16.07■□□□□ 0.16
CLN6-216ENST00000636876 DPPA4Q7L190 304 aa16.07■□□□□ 0.16
CLN6-216ENST00000636876 JAMLQ86YT9 394 aa16.07■□□□□ 0.16
CLN6-216ENST00000636876 TBC1D3Q8IZP1 549 aaPredicted RBP16.07■□□□□ 0.16
CLN6-216ENST00000636876 CADM4Q8NFZ8 388 aa16.07■□□□□ 0.16
CLN6-216ENST00000636876 CCHCR1Q8TD31 782 aa16.07■□□□□ 0.16
CLN6-216ENST00000636876 SMIM14Q96QK8 99 aa16.07■□□□□ 0.16
CLN6-216ENST00000636876 TBL1YQ9BQ87 522 aa16.07■□□□□ 0.16
CLN6-216ENST00000636876 IRF2BPLQ9H1B7 796 aa16.07■□□□□ 0.16
CLN6-216ENST00000636876 C6orf106Q9H6K1 298 aaPredicted RBP16.07■□□□□ 0.16
CLN6-216ENST00000636876 R4GN57 208 aa16.07■□□□□ 0.16
CLN6-216ENST00000636876 GON4LQ3T8J9 2241 aa16.07■□□□□ 0.16
CLN6-216ENST00000636876 SDK1Q7Z5N4 2213 aa16.07■□□□□ 0.16
CLN6-216ENST00000636876 MYO15AQ9UKN7 3530 aa16.07■□□□□ 0.16
CLN6-216ENST00000636876 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.06■□□□□ 0.16
CLN6-216ENST00000636876 NPIPB15A6NHN6 443 aaPredicted RBP16.06■□□□□ 0.16
CLN6-216ENST00000636876 E7EVH7 732 aa16.06■□□□□ 0.16
CLN6-216ENST00000636876 TTI1O43156 1089 aa16.06■□□□□ 0.16
CLN6-216ENST00000636876 RNGTTO60942 597 aaKnown RBP16.06■□□□□ 0.16
CLN6-216ENST00000636876 PCDH8O95206 1070 aa16.06■□□□□ 0.16
CLN6-216ENST00000636876 FGF1P05230 155 aa16.06■□□□□ 0.16
CLN6-216ENST00000636876 APRTP07741 180 aa16.06■□□□□ 0.16
CLN6-216ENST00000636876 ALPIP09923 528 aa16.06■□□□□ 0.16
CLN6-216ENST00000636876 CYP2A6P11509 494 aaPredicted RBP16.06■□□□□ 0.16
CLN6-216ENST00000636876 HNF1BP35680 557 aa16.06■□□□□ 0.16
CLN6-216ENST00000636876 LMAN1P49257 510 aa16.06■□□□□ 0.16
CLN6-216ENST00000636876 CCR5P51681 352 aa16.06■□□□□ 0.16
CLN6-216ENST00000636876 PPP2CBP62714 309 aa16.06■□□□□ 0.16
CLN6-216ENST00000636876 PPP2CAP67775 309 aa16.06■□□□□ 0.16
CLN6-216ENST00000636876 BASP1P80723 227 aaKnown RBP16.06■□□□□ 0.16
CLN6-216ENST00000636876 SEMG2Q02383 582 aa16.06■□□□□ 0.16
CLN6-216ENST00000636876 OLIG2Q13516 323 aa16.06■□□□□ 0.16
CLN6-216ENST00000636876 SPARCL1Q14515 664 aa16.06■□□□□ 0.16
CLN6-216ENST00000636876 PTPRRQ15256 657 aa16.06■□□□□ 0.16
CLN6-216ENST00000636876 PLK5Q496M5 336 aa16.06■□□□□ 0.16
CLN6-216ENST00000636876 DNTTIP2Q5QJE6 756 aaKnown RBP16.06■□□□□ 0.16
CLN6-216ENST00000636876 SYCP2LQ5T4T6 812 aa16.06■□□□□ 0.16
CLN6-216ENST00000636876 PMS2CLQ68D20 193 aa16.06■□□□□ 0.16
CLN6-216ENST00000636876 KIAA0895LQ68EN5 471 aa16.06■□□□□ 0.16
CLN6-216ENST00000636876 LPCAT2Q7L5N7 544 aa16.06■□□□□ 0.16
CLN6-216ENST00000636876 TRIM69Q86WT6 500 aa16.06■□□□□ 0.16
CLN6-216ENST00000636876 TMEFF1Q8IYR6 380 aa16.06■□□□□ 0.16
CLN6-216ENST00000636876 SLC25A41Q8N5S1 370 aa16.06■□□□□ 0.16
CLN6-216ENST00000636876 APOL2Q9BQE5 337 aa16.06■□□□□ 0.16
CLN6-216ENST00000636876 DUSP15Q9H1R2 295 aaPredicted RBP16.06■□□□□ 0.16
CLN6-216ENST00000636876 EIF2B3Q9NR50 452 aaKnown RBP16.06■□□□□ 0.16
CLN6-216ENST00000636876 ASIC3Q9UHC3 531 aa16.06■□□□□ 0.16
CLN6-216ENST00000636876 TRPM6Q9BX84 2022 aa16.06■□□□□ 0.16
CLN6-216ENST00000636876 THADAQ6YHU6 1953 aa16.06■□□□□ 0.16
CLN6-216ENST00000636876 A0A1W2PQU0 124 aa16.05■□□□□ 0.16
CLN6-216ENST00000636876 CTAGE15A4D2H0 777 aa16.05■□□□□ 0.16
CLN6-216ENST00000636876 FAM187AA6NFU0 413 aa16.05■□□□□ 0.16
CLN6-216ENST00000636876 USP12O75317 370 aa16.05■□□□□ 0.16
CLN6-216ENST00000636876 SUN1O94901 812 aa16.05■□□□□ 0.16
CLN6-216ENST00000636876 CTAGE8P0CG41 777 aa16.05■□□□□ 0.16
CLN6-216ENST00000636876 MAGEA6P43360 314 aa16.05■□□□□ 0.16
CLN6-216ENST00000636876 RALGDSQ12967 914 aa16.05■□□□□ 0.16
CLN6-216ENST00000636876 SIM2Q14190 667 aaPredicted RBP16.05■□□□□ 0.16
CLN6-216ENST00000636876 ELF2Q15723 593 aa16.05■□□□□ 0.16
CLN6-216ENST00000636876 TMEM259Q4ZIN3 620 aa16.05■□□□□ 0.16
CLN6-216ENST00000636876 SPDYCQ5MJ68 293 aa16.05■□□□□ 0.16
CLN6-216ENST00000636876 NAPEPLDQ6IQ20 393 aa16.05■□□□□ 0.16
CLN6-216ENST00000636876 DENND5AQ6IQ26 1287 aa16.05■□□□□ 0.16
CLN6-216ENST00000636876 KIAA1161Q6NSJ0 714 aa16.05■□□□□ 0.16
CLN6-216ENST00000636876 MAATS1Q7Z4T9 603 aa16.05■□□□□ 0.16
CLN6-216ENST00000636876 CTAGE6Q86UF2 777 aa16.05■□□□□ 0.16
CLN6-216ENST00000636876 HORMAD1Q86X24 394 aa16.05■□□□□ 0.16
CLN6-216ENST00000636876 CTAGE4Q8IX94 777 aa16.05■□□□□ 0.16
CLN6-216ENST00000636876 CEP112Q8N8E3 955 aa16.05■□□□□ 0.16
CLN6-216ENST00000636876 CXorf40AQ8TE69 158 aa16.05■□□□□ 0.16
CLN6-216ENST00000636876 ZC3H10Q96K80 434 aaKnown RBP16.05■□□□□ 0.16
CLN6-216ENST00000636876 LYSMD1Q96S90 227 aa16.05■□□□□ 0.16
CLN6-216ENST00000636876 TRIM51Q9BSJ1 452 aa16.05■□□□□ 0.16
CLN6-216ENST00000636876 WRAP53Q9BUR4 548 aaKnown RBP16.05■□□□□ 0.16
CLN6-216ENST00000636876 ARNT2Q9HBZ2 717 aa16.05■□□□□ 0.16
CLN6-216ENST00000636876 TPX2Q9ULW0 747 aaKnown RBP16.05■□□□□ 0.16
CLN6-216ENST00000636876 ZFR2Q9UPR6 939 aaKnown RBP16.05■□□□□ 0.16
CLN6-216ENST00000636876 FRYLO94915 3013 aa16.04■□□□□ 0.16
CLN6-216ENST00000636876 GVINP1Q7Z2Y8 2422 aa16.04■□□□□ 0.16
CLN6-216ENST00000636876 METTL12A8MUP2 240 aa16.04■□□□□ 0.16
CLN6-216ENST00000636876 A8MX80 341 aa16.04■□□□□ 0.16
CLN6-216ENST00000636876 RAD51CO43502 376 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms