RNA–Protein interactions for RNA: ENST00000636466.1

GABRB3-219, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-219ENST00000636466 C2orf73Q8N5S3 287 aaPredicted RBP14.26□□□□□ -0.13
GABRB3-219ENST00000636466 SCLYQ96I15 445 aa14.26□□□□□ -0.13
GABRB3-219ENST00000636466 RPL10LQ96L21 214 aaKnown RBP14.26□□□□□ -0.13
GABRB3-219ENST00000636466 HBS1LQ9Y450 684 aaKnown RBP14.26□□□□□ -0.13
GABRB3-219ENST00000636466 COL1A2P08123 1366 aa14.26□□□□□ -0.13
GABRB3-219ENST00000636466 STBD1O95210 358 aa14.25□□□□□ -0.13
GABRB3-219ENST00000636466 TSHRP16473 764 aa14.25□□□□□ -0.13
GABRB3-219ENST00000636466 CRHR2Q13324 411 aa14.25□□□□□ -0.13
GABRB3-219ENST00000636466 ADGRD1Q6QNK2 874 aa14.25□□□□□ -0.13
GABRB3-219ENST00000636466 CUZD1Q86UP6 607 aa14.25□□□□□ -0.13
GABRB3-219ENST00000636466 MPP5Q8N3R9 675 aa14.25□□□□□ -0.13
GABRB3-219ENST00000636466 NPLOC4Q8TAT6 608 aa14.25□□□□□ -0.13
GABRB3-219ENST00000636466 OSCP1Q8WVF1 389 aa14.25□□□□□ -0.13
GABRB3-219ENST00000636466 TSSK3Q96PN8 268 aa14.25□□□□□ -0.13
GABRB3-219ENST00000636466 CCDC3Q9BQI4 270 aa14.25□□□□□ -0.13
GABRB3-219ENST00000636466 SIKE1Q9BRV8 207 aa14.25□□□□□ -0.13
GABRB3-219ENST00000636466 CFAP97Q9P2B7 532 aa14.25□□□□□ -0.13
GABRB3-219ENST00000636466 FCGR1AP12314 374 aa14.25□□□□□ -0.13
GABRB3-219ENST00000636466 HOXB8P17481 243 aaPredicted RBP14.25□□□□□ -0.13
GABRB3-219ENST00000636466 PTPN9P43378 593 aa14.25□□□□□ -0.13
GABRB3-219ENST00000636466 AFTPHQ6ULP2 937 aa14.25□□□□□ -0.13
GABRB3-219ENST00000636466 GPRIN3Q6ZVF9 776 aa14.25□□□□□ -0.13
GABRB3-219ENST00000636466 HFE2Q6ZVN8 426 aa14.25□□□□□ -0.13
GABRB3-219ENST00000636466 TMEM130Q8N3G9 435 aa14.25□□□□□ -0.13
GABRB3-219ENST00000636466 COPS8Q99627 209 aa14.25□□□□□ -0.13
GABRB3-219ENST00000636466 ZCCHC2Q9C0B9 1178 aaKnown RBP14.25□□□□□ -0.13
GABRB3-219ENST00000636466 TNKS2Q9H2K2 1166 aa14.25□□□□□ -0.13
GABRB3-219ENST00000636466 ZDHHC18Q9NUE0 388 aa14.25□□□□□ -0.13
GABRB3-219ENST00000636466 CLIC5Q9NZA1 410 aa14.25□□□□□ -0.13
GABRB3-219ENST00000636466 PARP4Q9UKK3 1724 aaKnown RBP14.25□□□□□ -0.13
GABRB3-219ENST00000636466 CHD2O14647 1828 aaKnown RBP14.25□□□□□ -0.13
GABRB3-219ENST00000636466 NEMP2A6NFY4 417 aa14.25□□□□□ -0.13
GABRB3-219ENST00000636466 AP2A1O95782 977 aa14.25□□□□□ -0.13
GABRB3-219ENST00000636466 FGF1P05230 155 aa14.25□□□□□ -0.13
GABRB3-219ENST00000636466 ANPEPP15144 967 aa14.25□□□□□ -0.13
GABRB3-219ENST00000636466 IGFBP4P22692 258 aa14.25□□□□□ -0.13
GABRB3-219ENST00000636466 PTPN3P26045 913 aa14.25□□□□□ -0.13
GABRB3-219ENST00000636466 WDR4P57081 412 aaKnown RBP14.25□□□□□ -0.13
GABRB3-219ENST00000636466 ALFQ53S48 1182 aa14.25□□□□□ -0.13
GABRB3-219ENST00000636466 VARS2Q5ST30 1063 aaKnown RBP14.25□□□□□ -0.13
GABRB3-219ENST00000636466 PLPP4Q5VZY2 271 aa14.25□□□□□ -0.13
GABRB3-219ENST00000636466 LPCAT4Q643R3 524 aa14.25□□□□□ -0.13
GABRB3-219ENST00000636466 TYW3Q6IPR3 259 aaKnown RBP14.25□□□□□ -0.13
GABRB3-219ENST00000636466 TMEM26Q6ZUK4 368 aa14.25□□□□□ -0.13
GABRB3-219ENST00000636466 PARP8Q8N3A8 854 aa14.25□□□□□ -0.13
GABRB3-219ENST00000636466 TMCO5AQ8N6Q1 288 aa14.25□□□□□ -0.13
GABRB3-219ENST00000636466 QKIQ96PU8 341 aaKnown RBP eCLIP14.25□□□□□ -0.13
GABRB3-219ENST00000636466 GTF2A1LQ9UNN4 478 aa14.25□□□□□ -0.13
GABRB3-219ENST00000636466 TNPO3Q9Y5L0 923 aaKnown RBP14.25□□□□□ -0.13
GABRB3-219ENST00000636466 NEDD8-MDP1E9PL57 170 aa14.25□□□□□ -0.13
GABRB3-219ENST00000636466 GSC2O15499 205 aa14.25□□□□□ -0.13
GABRB3-219ENST00000636466 WASP42768 502 aa14.25□□□□□ -0.13
GABRB3-219ENST00000636466 CRATP43155 626 aa14.25□□□□□ -0.13
GABRB3-219ENST00000636466 POLD2P49005 469 aa14.25□□□□□ -0.13
GABRB3-219ENST00000636466 PTP4A2Q12974 167 aa14.25□□□□□ -0.13
GABRB3-219ENST00000636466 PRKG2Q13237 762 aa14.25□□□□□ -0.13
GABRB3-219ENST00000636466 TRIM16LQ309B1 348 aa14.25□□□□□ -0.13
GABRB3-219ENST00000636466 EID3Q8N140 333 aa14.25□□□□□ -0.13
GABRB3-219ENST00000636466 STX19Q8N4C7 294 aa14.25□□□□□ -0.13
GABRB3-219ENST00000636466 PHF21AQ96BD5 680 aa14.25□□□□□ -0.13
GABRB3-219ENST00000636466 FBXL18Q96ME1 805 aa14.25□□□□□ -0.13
GABRB3-219ENST00000636466 GATA5Q9BWX5 397 aaPredicted RBP14.25□□□□□ -0.13
GABRB3-219ENST00000636466 CDH19Q9H159 772 aa14.25□□□□□ -0.13
GABRB3-219ENST00000636466 ZNF395Q9H8N7 513 aaPredicted RBP14.25□□□□□ -0.13
GABRB3-219ENST00000636466 U3KQV3 271 aa14.25□□□□□ -0.13
GABRB3-219ENST00000636466 NUMA1Q14980 2115 aa14.25□□□□□ -0.13
GABRB3-219ENST00000636466 RGS20O76081 388 aa14.24□□□□□ -0.13
GABRB3-219ENST00000636466 MTA2O94776 668 aa14.24□□□□□ -0.13
GABRB3-219ENST00000636466 TKTP29401 623 aaKnown RBP14.24□□□□□ -0.13
GABRB3-219ENST00000636466 KLF10Q13118 480 aa14.24□□□□□ -0.13
GABRB3-219ENST00000636466 MAPK11Q15759 364 aa14.24□□□□□ -0.13
GABRB3-219ENST00000636466 HECTD2Q5U5R9 776 aa14.24□□□□□ -0.13
GABRB3-219ENST00000636466 FIBCD1Q8N539 461 aa14.24□□□□□ -0.13
GABRB3-219ENST00000636466 ZNF398Q8TD17 642 aa14.24□□□□□ -0.13
GABRB3-219ENST00000636466 TLCD1Q96CP7 247 aa14.24□□□□□ -0.13
GABRB3-219ENST00000636466 TMEM245Q9H330 911 aa14.24□□□□□ -0.13
GABRB3-219ENST00000636466 ANAPC2Q9UJX6 822 aa14.24□□□□□ -0.13
GABRB3-219ENST00000636466 OR6C75A6NL08 312 aa14.24□□□□□ -0.13
GABRB3-219ENST00000636466 BIRC5O15392 142 aa14.24□□□□□ -0.13
GABRB3-219ENST00000636466 TPSB2P20231 275 aa14.24□□□□□ -0.13
GABRB3-219ENST00000636466 MAD2L1Q13257 205 aaPredicted RBP14.24□□□□□ -0.13
GABRB3-219ENST00000636466 TPSAB1Q15661 275 aa14.24□□□□□ -0.13
GABRB3-219ENST00000636466 LRRC73Q5JTD7 316 aa14.24□□□□□ -0.13
GABRB3-219ENST00000636466 ZFP1Q6P2D0 407 aa14.24□□□□□ -0.13
GABRB3-219ENST00000636466 CLYBLQ8N0X4 340 aa14.24□□□□□ -0.13
GABRB3-219ENST00000636466 FAM156AQ8NDB6 213 aa14.24□□□□□ -0.13
GABRB3-219ENST00000636466 DNAJC1Q96KC8 554 aaKnown RBP14.24□□□□□ -0.13
GABRB3-219ENST00000636466 PPM1MQ96MI6 270 aa14.24□□□□□ -0.13
GABRB3-219ENST00000636466 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.24□□□□□ -0.13
GABRB3-219ENST00000636466 MMADHCQ9H3L0 296 aaPredicted RBP14.24□□□□□ -0.13
GABRB3-219ENST00000636466 PRDM16Q9HAZ2 1276 aa14.24□□□□□ -0.13
GABRB3-219ENST00000636466 SLC25A14O95258 325 aaPredicted RBP14.24□□□□□ -0.13
GABRB3-219ENST00000636466 ITPKAP23677 461 aa14.24□□□□□ -0.13
GABRB3-219ENST00000636466 GPR1P46091 355 aa14.24□□□□□ -0.13
GABRB3-219ENST00000636466 TAS2R39P59534 338 aa14.24□□□□□ -0.13
GABRB3-219ENST00000636466 CRTC3Q6UUV7 619 aa14.24□□□□□ -0.13
GABRB3-219ENST00000636466 VSTM1Q6UX27 236 aa14.24□□□□□ -0.13
GABRB3-219ENST00000636466 C12orf50Q8NA57 414 aaPredicted RBP14.24□□□□□ -0.13
GABRB3-219ENST00000636466 HMCESQ96FZ2 354 aa14.24□□□□□ -0.13
GABRB3-219ENST00000636466 MPP4Q96JB8 637 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms