RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 LRRC42Q9Y546 428 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 LOC100653049A0A140TA62 436 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 HHLA1C9JL84 531 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 TXNDC9O14530 226 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 AIM2O14862 343 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 HNRNPRO43390 633 aaKnown RBP4.57□□□□□ -1.68
SCN1A-210ENST00000635776 CCNT2O60583 730 aaKnown RBP4.57□□□□□ -1.68
SCN1A-210ENST00000635776 KRT34O76011 436 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 ADH1AP07327 375 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 RXRGP48443 463 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 SNRPD1P62314 119 aaKnown RBP4.57□□□□□ -1.68
SCN1A-210ENST00000635776 ZRANB3Q5FWF4 1079 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 MS4A13Q5J8X5 152 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 ADGRF1Q5T601 910 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 GRAMD4Q6IC98 578 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 C16orf46Q6P387 395 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 HACD2Q6Y1H2 254 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 CMC1Q7Z7K0 106 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 GALNT13Q8IUC8 556 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 KLHDC8BQ8IXV7 354 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 RBM15BQ8NDT2 890 aaKnown RBP4.57□□□□□ -1.68
SCN1A-210ENST00000635776 ARNTL2Q8WYA1 636 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 SLC7A6OSQ96CW6 309 aaPredicted RBP4.57□□□□□ -1.68
SCN1A-210ENST00000635776 PTCD3Q96EY7 689 aaKnown RBP4.57□□□□□ -1.68
SCN1A-210ENST00000635776 TTLL2Q9BWV7 592 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 FLRT1Q9NZU1 646 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 PRR5-ARHGAP8B1AHC4 643 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 SUPT3HB4E1H0 165 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 DCXO43602 365 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 SUPT3HO75486 399 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 PIK3R1P27986 724 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 TAS2R39P59534 338 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 ST8SIA6P61647 398 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 ARHGAP8P85298 464 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 CACNG1Q06432 222 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 LCP2Q13094 533 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 ZCCHC23Q6ZST2 131 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 LPCAT1Q8NF37 534 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 FOPNLQ96NB1 174 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 FAM126AQ9BYI3 521 aaPredicted RBP4.57□□□□□ -1.68
SCN1A-210ENST00000635776 ATP13A3Q9H7F0 1226 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 CD274Q9NZQ7 290 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 MTRRQ9UBK8 725 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 E9PBE3 544 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 CBX4O00257 560 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 PRMT5O14744 637 aaPredicted RBP4.57□□□□□ -1.68
SCN1A-210ENST00000635776 KLHL41O60662 606 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 SOD2P04179 222 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 PSMA4P25789 261 aaKnown RBP4.57□□□□□ -1.68
SCN1A-210ENST00000635776 IDH3AP50213 366 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 ARHGDIAP52565 204 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 USP46P62068 366 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 GAD2Q05329 585 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 MTX3Q5HYI7 312 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 CPSF7Q8N684 471 aaKnown RBP4.57□□□□□ -1.68
SCN1A-210ENST00000635776 VPS37AQ8NEZ2 397 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 OR10T2Q8NGX3 314 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 ATL1Q8WXF7 558 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 PPP3R2Q96LZ3 170 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 EGFL8Q99944 293 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 UNC93B1Q9H1C4 597 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 DENND2DQ9H6A0 471 aaPredicted RBP4.57□□□□□ -1.68
SCN1A-210ENST00000635776 WDR41Q9HAD4 459 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 FBXO6Q9NRD1 293 aaPredicted RBP4.57□□□□□ -1.68
SCN1A-210ENST00000635776 FAM92AA1XBS5 289 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 GRXCR2A6NFK2 248 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 STX16-NPEPL1H3BU86 382 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 STX16O14662 325 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 MRASO14807 208 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 AZIN1O14977 448 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 PHGDHO43175 533 aaKnown RBP4.57□□□□□ -1.68
SCN1A-210ENST00000635776 XYLBO75191 536 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 BEST1O76090 585 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 NMBRP28336 390 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 GRIA1P42261 906 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 PTDSS1P48651 473 aaKnown RBP4.57□□□□□ -1.68
SCN1A-210ENST00000635776 FASTKQ14296 549 aaKnown RBP4.57□□□□□ -1.68
SCN1A-210ENST00000635776 USP45Q70EL2 814 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 CUZD1Q86UP6 607 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 OSCP1Q8WVF1 389 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 ZFRQ96KR1 1074 aaKnown RBP4.57□□□□□ -1.68
SCN1A-210ENST00000635776 TRAPPC9Q96Q05 1148 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 RMND5AQ9H871 391 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 NMRK2Q9NPI5 230 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 TRAF6Q9Y4K3 522 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 H0YJX3 145 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 NPPAP01160 153 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 OR56A5P0C7T3 313 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 MSH3P20585 1137 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 PLK1P53350 603 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 DMC1Q14565 340 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 ARL13AQ5H913 290 aaPredicted RBP4.57□□□□□ -1.68
SCN1A-210ENST00000635776 SLC8B1Q6J4K2 584 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 TFAP2DQ7Z6R9 452 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 CLEC14AQ86T13 490 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 DBF4BQ8NFT6 615 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 TRPC4APQ8TEL6 797 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 TRMT2BQ96GJ1 504 aaKnown RBP4.57□□□□□ -1.68
SCN1A-210ENST00000635776 CAPNS2Q96L46 248 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 PRPF18Q99633 342 aaKnown RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms