RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 SERPINE1P05121 402 aa7.21□□□□□ -1.26
BRCA1-230ENST00000634433 CRABP2P29373 138 aa7.21□□□□□ -1.26
BRCA1-230ENST00000634433 PPM1AP35813 382 aa7.21□□□□□ -1.26
BRCA1-230ENST00000634433 CD86P42081 329 aa7.21□□□□□ -1.26
BRCA1-230ENST00000634433 KPNA2P52292 529 aaKnown RBP7.21□□□□□ -1.26
BRCA1-230ENST00000634433 SLC10A7Q0GE19 358 aa7.21□□□□□ -1.26
BRCA1-230ENST00000634433 BST1Q10588 318 aa7.21□□□□□ -1.26
BRCA1-230ENST00000634433 OVGP1Q12889 678 aa7.21□□□□□ -1.26
BRCA1-230ENST00000634433 ZNF177Q13360 481 aaPredicted RBP7.21□□□□□ -1.26
BRCA1-230ENST00000634433 GFOD2Q3B7J2 385 aa7.21□□□□□ -1.26
BRCA1-230ENST00000634433 PABPC1LQ4VXU2 614 aaKnown RBP7.21□□□□□ -1.26
BRCA1-230ENST00000634433 NADSYN1Q6IA69 706 aa7.21□□□□□ -1.26
BRCA1-230ENST00000634433 CHST9Q7L1S5 443 aa7.21□□□□□ -1.26
BRCA1-230ENST00000634433 PEX13Q92968 403 aa7.21□□□□□ -1.26
BRCA1-230ENST00000634433 IFT43Q96FT9 208 aa7.21□□□□□ -1.26
BRCA1-230ENST00000634433 THOC1Q96FV9 657 aaKnown RBP7.21□□□□□ -1.26
BRCA1-230ENST00000634433 VPS39Q96JC1 886 aa7.21□□□□□ -1.26
BRCA1-230ENST00000634433 CRB3Q9BUF7 120 aa7.21□□□□□ -1.26
BRCA1-230ENST00000634433 SLC17A6Q9P2U8 582 aa7.21□□□□□ -1.26
BRCA1-230ENST00000634433 ZNF212Q9UDV6 495 aa7.21□□□□□ -1.26
BRCA1-230ENST00000634433 CHKBQ9Y259 395 aa7.21□□□□□ -1.26
BRCA1-230ENST00000634433 YIPF1Q9Y548 306 aa7.21□□□□□ -1.26
BRCA1-230ENST00000634433 ILVBLA1L0T0 632 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 B2RBV5 119 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 PRRG1O14668 218 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 COCHO43405 550 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 SNNO75324 88 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-230ENST00000634433 RASSF9O75901 435 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 VAPBO95292 243 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 CPA3P15088 417 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 NQO1P15559 274 aaKnown RBP7.2□□□□□ -1.26
BRCA1-230ENST00000634433 HMGA1P17096 107 aaKnown RBP7.2□□□□□ -1.26
BRCA1-230ENST00000634433 RPL17P18621 184 aaKnown RBP7.2□□□□□ -1.26
BRCA1-230ENST00000634433 HLA-DPA1P20036 260 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 ARCN1P48444 511 aaKnown RBP7.2□□□□□ -1.26
BRCA1-230ENST00000634433 KCNQ1P51787 676 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 NCALDP61601 193 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 PFKPQ01813 784 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 OCRLQ01968 901 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 GNA12Q03113 381 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 ASPHQ12797 758 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 SLC12A1Q13621 1099 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 USP10Q14694 798 aaKnown RBP7.2□□□□□ -1.26
BRCA1-230ENST00000634433 PCSK7Q16549 785 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 SPRED3Q2MJR0 410 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 TUSC1Q2TAM9 212 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 ARMC4Q5T2S8 1044 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 TSTD2Q5T7W7 516 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 ESRP1Q6NXG1 681 aaKnown RBP7.2□□□□□ -1.26
BRCA1-230ENST00000634433 IRGCQ6NXR0 463 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 ZNF783Q6ZMS7 281 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 RAPH1Q70E73 1250 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 SETD3Q86TU7 594 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-230ENST00000634433 ZC3HC1Q86WB0 502 aaKnown RBP7.2□□□□□ -1.26
BRCA1-230ENST00000634433 NKAPQ8N5F7 415 aaKnown RBP7.2□□□□□ -1.26
BRCA1-230ENST00000634433 RFWD2Q8NHY2 731 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 RDH11Q8TC12 318 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 TADA1Q96BN2 335 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 RBM18Q96H35 190 aaKnown RBP7.2□□□□□ -1.26
BRCA1-230ENST00000634433 FEM1CQ96JP0 617 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 MCMBPQ9BTE3 642 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 MECRQ9BV79 373 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 VN1R3Q9BXE9 311 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 WWP1Q9H0M0 922 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 STN1Q9H668 368 aaKnown RBP7.2□□□□□ -1.26
BRCA1-230ENST00000634433 MRPL17Q9NRX2 175 aaKnown RBP7.2□□□□□ -1.26
BRCA1-230ENST00000634433 TREX1Q9NSU2 369 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 IL1RAPL1Q9NZN1 696 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 COPG2Q9UBF2 871 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 ASB3Q9Y575 518 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 HTTP42858 3142 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 MICAL3Q7RTP6 2002 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 LOC285095A0A1B0GVY8 99 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 KDELR3O43731 214 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 KIF1CO43896 1103 aaKnown RBP7.2□□□□□ -1.26
BRCA1-230ENST00000634433 CCDC22O60826 627 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 SEC24AO95486 1093 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 TIMP1P01033 207 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 FGF1P05230 155 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 C2P06681 752 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 SERPINF2P08697 491 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 DLDP09622 509 aaKnown RBP7.2□□□□□ -1.26
BRCA1-230ENST00000634433 CORO1AP31146 461 aaKnown RBP7.2□□□□□ -1.26
BRCA1-230ENST00000634433 IRS1P35568 1242 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 SLC12A2P55011 1212 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 OXCT1P55809 520 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 POU4F1Q01851 419 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 SMAD4Q13485 552 aaKnown RBP7.2□□□□□ -1.26
BRCA1-230ENST00000634433 CNGA3Q16281 694 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 C2orf27AQ580R0 203 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 ADGRF1Q5T601 910 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 NEPROQ6NW34 567 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 C16orf46Q6P387 395 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 GALNT7Q86SF2 657 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 MTDHQ86UE4 582 aaKnown RBP7.2□□□□□ -1.26
BRCA1-230ENST00000634433 TMEM199Q8N511 208 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 SLC25A41Q8N5S1 370 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 NKAIN3Q8N8D7 197 aa7.2□□□□□ -1.26
BRCA1-230ENST00000634433 C2CD4AQ8NCU7 369 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-230ENST00000634433 INPP5DQ92835 1189 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms