RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 TRIOBPQ9H2D6 2365 aa7.54□□□□□ -1.2
PKP4-217ENST00000628904 H7C4K7 107 aa7.54□□□□□ -1.2
PKP4-217ENST00000628904 NVLO15381 856 aaKnown RBP7.54□□□□□ -1.2
PKP4-217ENST00000628904 FGF10O15520 208 aaPredicted RBP7.54□□□□□ -1.2
PKP4-217ENST00000628904 DLX3O60479 287 aa7.54□□□□□ -1.2
PKP4-217ENST00000628904 CCNT2O60583 730 aaKnown RBP7.54□□□□□ -1.2
PKP4-217ENST00000628904 ATP5HO75947 161 aa7.54□□□□□ -1.2
PKP4-217ENST00000628904 CABYRO75952 493 aa7.54□□□□□ -1.2
PKP4-217ENST00000628904 ATP6V1B1P15313 513 aa7.54□□□□□ -1.2
PKP4-217ENST00000628904 KCNA5P22460 613 aa7.54□□□□□ -1.2
PKP4-217ENST00000628904 CCNCP24863 283 aa7.54□□□□□ -1.2
PKP4-217ENST00000628904 GABRB3P28472 473 aa7.54□□□□□ -1.2
PKP4-217ENST00000628904 SLC6A4P31645 630 aa7.54□□□□□ -1.2
PKP4-217ENST00000628904 GDF5P43026 501 aa7.54□□□□□ -1.2
PKP4-217ENST00000628904 TUFMP49411 452 aaKnown RBP7.54□□□□□ -1.2
PKP4-217ENST00000628904 RPL14P50914 215 aaKnown RBP7.54□□□□□ -1.2
PKP4-217ENST00000628904 POLE2P56282 527 aa7.54□□□□□ -1.2
PKP4-217ENST00000628904 CAPRIN1Q14444 709 aaKnown RBP7.54□□□□□ -1.2
PKP4-217ENST00000628904 RBBP5Q15291 538 aaKnown RBP7.54□□□□□ -1.2
PKP4-217ENST00000628904 TSNQ15631 228 aaKnown RBP7.54□□□□□ -1.2
PKP4-217ENST00000628904 NRF1Q16656 503 aa7.54□□□□□ -1.2
PKP4-217ENST00000628904 LSM12Q3MHD2 195 aaKnown RBP7.54□□□□□ -1.2
PKP4-217ENST00000628904 BRMS1LQ5PSV4 323 aa7.54□□□□□ -1.2
PKP4-217ENST00000628904 IZUMO2Q6UXV1 221 aa7.54□□□□□ -1.2
PKP4-217ENST00000628904 MARK2Q7KZI7 788 aaKnown RBP7.54□□□□□ -1.2
PKP4-217ENST00000628904 CCNJLQ8IV13 435 aa7.54□□□□□ -1.2
PKP4-217ENST00000628904 ANKLE1Q8NAG6 615 aa7.54□□□□□ -1.2
PKP4-217ENST00000628904 SIDT2Q8NBJ9 832 aaKnown RBP7.54□□□□□ -1.2
PKP4-217ENST00000628904 PXYLP1Q8TE99 480 aa7.54□□□□□ -1.2
PKP4-217ENST00000628904 ANKRD49Q8WVL7 239 aa7.54□□□□□ -1.2
PKP4-217ENST00000628904 DNAJC9Q8WXX5 260 aa7.54□□□□□ -1.2
PKP4-217ENST00000628904 NTAN1Q96AB6 310 aa7.54□□□□□ -1.2
PKP4-217ENST00000628904 SPDL1Q96EA4 605 aa7.54□□□□□ -1.2
PKP4-217ENST00000628904 ZNF558Q96NG5 402 aa7.54□□□□□ -1.2
PKP4-217ENST00000628904 OLFM1Q99784 485 aa7.54□□□□□ -1.2
PKP4-217ENST00000628904 ASB8Q9H765 288 aa7.54□□□□□ -1.2
PKP4-217ENST00000628904 ZFP14Q9HCL3 533 aa7.54□□□□□ -1.2
PKP4-217ENST00000628904 MRPL17Q9NRX2 175 aaKnown RBP7.54□□□□□ -1.2
PKP4-217ENST00000628904 CATSPERZQ9NTU4 200 aa7.54□□□□□ -1.2
PKP4-217ENST00000628904 STOML1Q9UBI4 398 aa7.54□□□□□ -1.2
PKP4-217ENST00000628904 PNMA8BQ9ULN7 279 aaPredicted RBP7.54□□□□□ -1.2
PKP4-217ENST00000628904 SOX13Q9UN79 622 aa7.54□□□□□ -1.2
PKP4-217ENST00000628904 NPEPPSL1A6NEC2 478 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 UPK3BL1B0FP48 263 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 UPK3BL2E5RIL1 263 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 ACSL4O60488 711 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 RTN3O95197 1032 aaPredicted RBP7.53□□□□□ -1.2
PKP4-217ENST00000628904 UGT2B4P06133 528 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 FGF3P11487 239 aaPredicted RBP7.53□□□□□ -1.2
PKP4-217ENST00000628904 CCND1P24385 295 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 GCKP35557 465 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 ETV4P43268 484 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 FLOT2Q14254 428 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 FAM171BQ6P995 826 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 PAQR3Q6TCH7 311 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 FRMD7Q6ZUT3 714 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 CPNE9Q8IYJ1 553 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 LRRC43Q8N309 656 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 LZTR1Q8N653 840 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 C12orf76Q8N812 135 aaPredicted RBP7.53□□□□□ -1.2
PKP4-217ENST00000628904 DNAJB14Q8TBM8 379 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 UTP4Q969X6 686 aaKnown RBP7.53□□□□□ -1.2
PKP4-217ENST00000628904 SLC7A6OSQ96CW6 309 aaPredicted RBP7.53□□□□□ -1.2
PKP4-217ENST00000628904 VAT1Q99536 393 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 MAF1Q9H063 256 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 SMOC2Q9H3U7 446 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 TRMT6Q9UJA5 497 aaKnown RBP7.53□□□□□ -1.2
PKP4-217ENST00000628904 USP3Q9Y6I4 520 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 PAPPA2Q9BXP8 1791 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 WDR87Q6ZQQ6 2873 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 INPP4BO15327 924 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 PARNO95453 639 aaKnown RBP7.53□□□□□ -1.2
PKP4-217ENST00000628904 EOMESO95936 686 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 HOXD8P13378 290 aaPredicted RBP7.53□□□□□ -1.2
PKP4-217ENST00000628904 GM2AP17900 193 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 ATF6P18850 670 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 POU4F1Q01851 419 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 SLC18A2Q05940 514 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 TAZQ16635 292 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 TMC5Q6UXY8 1006 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 ULK2Q8IYT8 1036 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 ELMOD1Q8N336 334 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 ARHGAP18Q8N392 663 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 SPPL2BQ8TCT7 592 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 CYB5D2Q8WUJ1 264 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 PYCR2Q96C36 320 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 ZFYVE19Q96K21 471 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 SLC9A7Q96T83 725 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 MRPL46Q9H2W6 279 aaKnown RBP7.53□□□□□ -1.2
PKP4-217ENST00000628904 KCNK4Q9NYG8 393 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 RCOR3Q9P2K3 495 aaPredicted RBP7.53□□□□□ -1.2
PKP4-217ENST00000628904 LSM7Q9UK45 103 aaKnown RBP7.53□□□□□ -1.2
PKP4-217ENST00000628904 EMCNQ9ULC0 261 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 TLR6Q9Y2C9 796 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 KPNA3O00505 521 aaPredicted RBP7.53□□□□□ -1.2
PKP4-217ENST00000628904 INSIG1O15503 277 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 DNAJA2O60884 412 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 RHOQP17081 205 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 CSKP41240 450 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 AGTR2P50052 363 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms