RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 MCCC1Q96RQ3 725 aaPredicted RBP20.4■□□□□ 0.86
PTCD3-220ENST00000627371 OSBPL9Q96SU4 736 aa20.4■□□□□ 0.86
PTCD3-220ENST00000627371 TMEM121Q9BTD3 319 aa20.4■□□□□ 0.86
PTCD3-220ENST00000627371 NUSAP1Q9BXS6 441 aaKnown RBP20.4■□□□□ 0.86
PTCD3-220ENST00000627371 GBA3Q9H227 469 aa20.4■□□□□ 0.86
PTCD3-220ENST00000627371 B4GALT6Q9UBX8 382 aa20.4■□□□□ 0.86
PTCD3-220ENST00000627371 RSPH14Q9UHP6 348 aa20.4■□□□□ 0.86
PTCD3-220ENST00000627371 SNX12Q9UMY4 172 aa20.4■□□□□ 0.86
PTCD3-220ENST00000627371 SLC6A14Q9UN76 642 aa20.4■□□□□ 0.86
PTCD3-220ENST00000627371 KNL1Q8NG31 2342 aa20.39■□□□□ 0.86
PTCD3-220ENST00000627371 C5orf60A6NFR6 353 aa20.39■□□□□ 0.85
PTCD3-220ENST00000627371 OPHN1O60890 802 aa20.39■□□□□ 0.85
PTCD3-220ENST00000627371 TM7SF2O76062 418 aa20.39■□□□□ 0.85
PTCD3-220ENST00000627371 CYP2A6P11509 494 aaPredicted RBP20.39■□□□□ 0.85
PTCD3-220ENST00000627371 HNRNPA2B1P22626 353 aaKnown RBP20.39■□□□□ 0.85
PTCD3-220ENST00000627371 VIPR1P32241 457 aa20.39■□□□□ 0.85
PTCD3-220ENST00000627371 EPHB1P54762 984 aa20.39■□□□□ 0.85
PTCD3-220ENST00000627371 IRX4P78413 519 aa20.39■□□□□ 0.85
PTCD3-220ENST00000627371 SEMG2Q02383 582 aa20.39■□□□□ 0.85
PTCD3-220ENST00000627371 SGCGQ13326 291 aa20.39■□□□□ 0.85
PTCD3-220ENST00000627371 TEAD4Q15561 434 aa20.39■□□□□ 0.85
PTCD3-220ENST00000627371 C12orf50Q8NA57 414 aaPredicted RBP20.39■□□□□ 0.85
PTCD3-220ENST00000627371 TMEM145Q8NBT3 493 aa20.39■□□□□ 0.85
PTCD3-220ENST00000627371 LPCAT1Q8NF37 534 aa20.39■□□□□ 0.85
PTCD3-220ENST00000627371 CCDC110Q8TBZ0 833 aa20.39■□□□□ 0.85
PTCD3-220ENST00000627371 TRIB3Q96RU7 358 aa20.39■□□□□ 0.85
PTCD3-220ENST00000627371 WDR24Q96S15 920 aa20.39■□□□□ 0.85
PTCD3-220ENST00000627371 AASDHPPTQ9NRN7 309 aa20.39■□□□□ 0.85
PTCD3-220ENST00000627371 FAM153AQ9UHL3 310 aa20.39■□□□□ 0.85
PTCD3-220ENST00000627371 TTC7AQ9ULT0 858 aaPredicted RBP20.39■□□□□ 0.85
PTCD3-220ENST00000627371 A0A0J9YYE9 177 aa20.38■□□□□ 0.85
PTCD3-220ENST00000627371 LNP1A1A4G5 178 aa20.38■□□□□ 0.85
PTCD3-220ENST00000627371 NPIPB15A6NHN6 443 aaPredicted RBP20.38■□□□□ 0.85
PTCD3-220ENST00000627371 CES2O00748 559 aa20.38■□□□□ 0.85
PTCD3-220ENST00000627371 WNT9AO14904 365 aa20.38■□□□□ 0.85
PTCD3-220ENST00000627371 PAK4O96013 591 aaPredicted RBP20.38■□□□□ 0.85
PTCD3-220ENST00000627371 TRBC1P01850 177 aa20.38■□□□□ 0.85
PTCD3-220ENST00000627371 ELFN1P0C7U0 828 aa20.38■□□□□ 0.85
PTCD3-220ENST00000627371 C6P13671 934 aa20.38■□□□□ 0.85
PTCD3-220ENST00000627371 AKT2P31751 481 aa20.38■□□□□ 0.85
PTCD3-220ENST00000627371 LIG3P49916 1009 aa20.38■□□□□ 0.85
PTCD3-220ENST00000627371 GDF10P55107 478 aa20.38■□□□□ 0.85
PTCD3-220ENST00000627371 CDK18Q07002 472 aa20.38■□□□□ 0.85
PTCD3-220ENST00000627371 PCSK7Q16549 785 aa20.38■□□□□ 0.85
PTCD3-220ENST00000627371 CCNG2Q16589 344 aa20.38■□□□□ 0.85
PTCD3-220ENST00000627371 DRICH1Q6PGQ1 229 aaPredicted RBP20.38■□□□□ 0.85
PTCD3-220ENST00000627371 LIPIQ6XZB0 460 aa20.38■□□□□ 0.85
PTCD3-220ENST00000627371 C17orf53Q8N3J3 647 aaPredicted RBP20.38■□□□□ 0.85
PTCD3-220ENST00000627371 FAM71DQ8N9W8 422 aa20.38■□□□□ 0.85
PTCD3-220ENST00000627371 DENND6BQ8NEG7 585 aa20.38■□□□□ 0.85
PTCD3-220ENST00000627371 RTP4Q96DX8 246 aa20.38■□□□□ 0.85
PTCD3-220ENST00000627371 OXNAD1Q96HP4 312 aaPredicted RBP20.38■□□□□ 0.85
PTCD3-220ENST00000627371 LENG8Q96PV6 779 aaPredicted RBP20.38■□□□□ 0.85
PTCD3-220ENST00000627371 ADGRE3Q9BY15 652 aa20.38■□□□□ 0.85
PTCD3-220ENST00000627371 FZD3Q9NPG1 666 aa20.38■□□□□ 0.85
PTCD3-220ENST00000627371 UBP1Q9NZI7 540 aa20.38■□□□□ 0.85
PTCD3-220ENST00000627371 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.38■□□□□ 0.85
PTCD3-220ENST00000627371 A0A1W2PR77 199 aa20.37■□□□□ 0.85
PTCD3-220ENST00000627371 CAPN8A6NHC0 703 aa20.37■□□□□ 0.85
PTCD3-220ENST00000627371 F5H423 210 aaPredicted RBP20.37■□□□□ 0.85
PTCD3-220ENST00000627371 PMPCBO75439 489 aa20.37■□□□□ 0.85
PTCD3-220ENST00000627371 ALPIP09923 528 aa20.37■□□□□ 0.85
PTCD3-220ENST00000627371 CTPS1P17812 591 aa20.37■□□□□ 0.85
PTCD3-220ENST00000627371 LHCGRP22888 699 aa20.37■□□□□ 0.85
PTCD3-220ENST00000627371 CD38P28907 300 aa20.37■□□□□ 0.85
PTCD3-220ENST00000627371 HOXD11P31277 338 aaPredicted RBP20.37■□□□□ 0.85
PTCD3-220ENST00000627371 STIP1P31948 543 aaKnown RBP20.37■□□□□ 0.85
PTCD3-220ENST00000627371 CSNK1EP49674 416 aaKnown RBP20.37■□□□□ 0.85
PTCD3-220ENST00000627371 MPP3Q13368 585 aa20.37■□□□□ 0.85
PTCD3-220ENST00000627371 SNX1Q13596 522 aa20.37■□□□□ 0.85
PTCD3-220ENST00000627371 AGERQ15109 404 aa20.37■□□□□ 0.85
PTCD3-220ENST00000627371 QPCTQ16769 361 aa20.37■□□□□ 0.85
PTCD3-220ENST00000627371 KDELC1Q6UW63 502 aa20.37■□□□□ 0.85
PTCD3-220ENST00000627371 KIAA2013Q8IYS2 634 aa20.37■□□□□ 0.85
PTCD3-220ENST00000627371 COG1Q8WTW3 980 aa20.37■□□□□ 0.85
PTCD3-220ENST00000627371 IFT43Q96FT9 208 aa20.37■□□□□ 0.85
PTCD3-220ENST00000627371 MS4A14Q96JA4 679 aa20.37■□□□□ 0.85
PTCD3-220ENST00000627371 LYSMD1Q96S90 227 aa20.37■□□□□ 0.85
PTCD3-220ENST00000627371 KLF6Q99612 283 aaPredicted RBP20.37■□□□□ 0.85
PTCD3-220ENST00000627371 NAPGQ99747 312 aaPredicted RBP20.37■□□□□ 0.85
PTCD3-220ENST00000627371 MYOCQ99972 504 aa20.37■□□□□ 0.85
PTCD3-220ENST00000627371 GORASP1Q9BQQ3 440 aa20.37■□□□□ 0.85
PTCD3-220ENST00000627371 C1QTNF7Q9BXJ2 289 aa20.37■□□□□ 0.85
PTCD3-220ENST00000627371 DNAH14Q0VDD8 3507 aa20.37■□□□□ 0.85
PTCD3-220ENST00000627371 CFAP54Q96N23 3096 aa20.37■□□□□ 0.85
PTCD3-220ENST00000627371 SCN8AQ9UQD0 1980 aa20.36■□□□□ 0.85
PTCD3-220ENST00000627371 A8MX80 341 aa20.36■□□□□ 0.85
PTCD3-220ENST00000627371 ANKRD66B4E2M5 251 aa20.36■□□□□ 0.85
PTCD3-220ENST00000627371 PGRMC1O00264 195 aaKnown RBP20.36■□□□□ 0.85
PTCD3-220ENST00000627371 VILLO15195 856 aa20.36■□□□□ 0.85
PTCD3-220ENST00000627371 RAD51BO15315 384 aa20.36■□□□□ 0.85
PTCD3-220ENST00000627371 GCATO75600 419 aa20.36■□□□□ 0.85
PTCD3-220ENST00000627371 ANXA9O76027 345 aa20.36■□□□□ 0.85
PTCD3-220ENST00000627371 HEXIM1O94992 359 aaKnown RBP20.36■□□□□ 0.85
PTCD3-220ENST00000627371 WNT1P04628 370 aa20.36■□□□□ 0.85
PTCD3-220ENST00000627371 ITGAVP06756 1048 aa20.36■□□□□ 0.85
PTCD3-220ENST00000627371 SYPP08247 313 aa20.36■□□□□ 0.85
PTCD3-220ENST00000627371 ENGP17813 658 aa20.36■□□□□ 0.85
PTCD3-220ENST00000627371 TCP1P17987 556 aaKnown RBP20.36■□□□□ 0.85
PTCD3-220ENST00000627371 PSMB4P28070 264 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms