RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 UBP1Q9NZI7 540 aa14.81□□□□□ -0.04
PNKP-221ENST00000627317 SUSD2Q9UGT4 822 aa14.81□□□□□ -0.04
PNKP-221ENST00000627317 FAM153AQ9UHL3 310 aa14.81□□□□□ -0.04
PNKP-221ENST00000627317 DRG1Q9Y295 367 aaKnown RBP14.81□□□□□ -0.04
PNKP-221ENST00000627317 PCDHB9Q9Y5E1 797 aa14.81□□□□□ -0.04
PNKP-221ENST00000627317 CNOT1A5YKK6 2376 aaKnown RBP14.81□□□□□ -0.04
PNKP-221ENST00000627317 GON4LQ3T8J9 2241 aa14.8□□□□□ -0.04
PNKP-221ENST00000627317 CACNA1EQ15878 2313 aa14.8□□□□□ -0.04
PNKP-221ENST00000627317 GOLGA6CA6NDK9 693 aa14.8□□□□□ -0.04
PNKP-221ENST00000627317 GOLGA6BA6NDN3 693 aa14.8□□□□□ -0.04
PNKP-221ENST00000627317 NEMP1O14524 444 aa14.8□□□□□ -0.04
PNKP-221ENST00000627317 ARHGAP33O14559 1287 aa14.8□□□□□ -0.04
PNKP-221ENST00000627317 PLRG1O43660 514 aaKnown RBP14.8□□□□□ -0.04
PNKP-221ENST00000627317 PMPCBO75439 489 aa14.8□□□□□ -0.04
PNKP-221ENST00000627317 ANXA9O76027 345 aa14.8□□□□□ -0.04
PNKP-221ENST00000627317 URI1O94763 535 aaPredicted RBP14.8□□□□□ -0.04
PNKP-221ENST00000627317 MT-CYBP00156 380 aaPredicted RBP14.8□□□□□ -0.04
PNKP-221ENST00000627317 GOLGA6DP0CG33 693 aa14.8□□□□□ -0.04
PNKP-221ENST00000627317 TIMP2P16035 220 aa14.8□□□□□ -0.04
PNKP-221ENST00000627317 NFKBIAP25963 317 aa14.8□□□□□ -0.04
PNKP-221ENST00000627317 COILP38432 576 aaPredicted RBP14.8□□□□□ -0.04
PNKP-221ENST00000627317 ABL2P42684 1182 aa14.8□□□□□ -0.04
PNKP-221ENST00000627317 FNTAP49354 379 aa14.8□□□□□ -0.04
PNKP-221ENST00000627317 EPHB1P54762 984 aa14.8□□□□□ -0.04
PNKP-221ENST00000627317 GEMP55040 296 aa14.8□□□□□ -0.04
PNKP-221ENST00000627317 ERAP2Q6P179 960 aa14.8□□□□□ -0.04
PNKP-221ENST00000627317 CCDC137Q6PK04 289 aaKnown RBP14.8□□□□□ -0.04
PNKP-221ENST00000627317 ZSWIM9Q86XI8 627 aa14.8□□□□□ -0.04
PNKP-221ENST00000627317 OR2T34Q8NGX1 318 aa14.8□□□□□ -0.04
PNKP-221ENST00000627317 KIF18AQ8NI77 898 aa14.8□□□□□ -0.04
PNKP-221ENST00000627317 BIRC7Q96CA5 298 aa14.8□□□□□ -0.04
PNKP-221ENST00000627317 IFT43Q96FT9 208 aa14.8□□□□□ -0.04
PNKP-221ENST00000627317 PCDH9Q9HC56 1237 aa14.8□□□□□ -0.04
PNKP-221ENST00000627317 PREBQ9HCU5 417 aa14.8□□□□□ -0.04
PNKP-221ENST00000627317 DNAAF2Q9NVR5 837 aaKnown RBP14.8□□□□□ -0.04
PNKP-221ENST00000627317 GOLGA6AQ9NYA3 693 aa14.8□□□□□ -0.04
PNKP-221ENST00000627317 EIF2B4Q9UI10 523 aaKnown RBP14.8□□□□□ -0.04
PNKP-221ENST00000627317 CHKBQ9Y259 395 aa14.8□□□□□ -0.04
PNKP-221ENST00000627317 TBC1D3DA0A087WVF3 549 aa14.79□□□□□ -0.04
PNKP-221ENST00000627317 TBC1D3IA0A087WXS9 549 aa14.79□□□□□ -0.04
PNKP-221ENST00000627317 TBC1D3EA0A087X179 549 aa14.79□□□□□ -0.04
PNKP-221ENST00000627317 TBC1D3KA0A087X1G2 549 aa14.79□□□□□ -0.04
PNKP-221ENST00000627317 A0A1B0GTW7 788 aa14.79□□□□□ -0.04
PNKP-221ENST00000627317 TBC1D3FA6NER0 549 aaPredicted RBP14.79□□□□□ -0.04
PNKP-221ENST00000627317 TBC1D3LB9A6J9 549 aa14.79□□□□□ -0.04
PNKP-221ENST00000627317 PDE2AO00408 941 aaPredicted RBP14.79□□□□□ -0.04
PNKP-221ENST00000627317 BCAT2O15382 392 aaPredicted RBP14.79□□□□□ -0.04
PNKP-221ENST00000627317 AP1G1O43747 822 aa14.79□□□□□ -0.04
PNKP-221ENST00000627317 PCDH8O95206 1070 aa14.79□□□□□ -0.04
PNKP-221ENST00000627317 TBC1D3HP0C7X1 549 aa14.79□□□□□ -0.04
PNKP-221ENST00000627317 WNT3AP56704 352 aa14.79□□□□□ -0.04
PNKP-221ENST00000627317 TAS2R38P59533 333 aa14.79□□□□□ -0.04
PNKP-221ENST00000627317 RPL26P61254 145 aaKnown RBP14.79□□□□□ -0.04
PNKP-221ENST00000627317 ELP6Q0PNE2 266 aa14.79□□□□□ -0.04
PNKP-221ENST00000627317 GRIK2Q13002 908 aa14.79□□□□□ -0.04
PNKP-221ENST00000627317 MPP3Q13368 585 aa14.79□□□□□ -0.04
PNKP-221ENST00000627317 IHHQ14623 411 aa14.79□□□□□ -0.04
PNKP-221ENST00000627317 UGP2Q16851 508 aa14.79□□□□□ -0.04
PNKP-221ENST00000627317 PARP6Q2NL67 630 aa14.79□□□□□ -0.04
PNKP-221ENST00000627317 TBC1D3GQ6DHY5 549 aa14.79□□□□□ -0.04
PNKP-221ENST00000627317 TBC1D3CQ6IPX1 549 aa14.79□□□□□ -0.04
PNKP-221ENST00000627317 TTC27Q6P3X3 843 aa14.79□□□□□ -0.04
PNKP-221ENST00000627317 USP45Q70EL2 814 aa14.79□□□□□ -0.04
PNKP-221ENST00000627317 PIP4P1Q86T03 277 aa14.79□□□□□ -0.04
PNKP-221ENST00000627317 RGL4Q8IZJ4 473 aa14.79□□□□□ -0.04
PNKP-221ENST00000627317 TBC1D3Q8IZP1 549 aaPredicted RBP14.79□□□□□ -0.04
PNKP-221ENST00000627317 NDUFAF2Q8N183 169 aa14.79□□□□□ -0.04
PNKP-221ENST00000627317 TAB3Q8N5C8 712 aaPredicted RBP14.79□□□□□ -0.04
PNKP-221ENST00000627317 LPCAT1Q8NF37 534 aa14.79□□□□□ -0.04
PNKP-221ENST00000627317 IPMKQ8NFU5 416 aa14.79□□□□□ -0.04
PNKP-221ENST00000627317 OR2I1PQ8NGU4 316 aa14.79□□□□□ -0.04
PNKP-221ENST00000627317 ATL2Q8NHH9 583 aa14.79□□□□□ -0.04
PNKP-221ENST00000627317 CEP192Q8TEP8 1941 aa14.79□□□□□ -0.04
PNKP-221ENST00000627317 GRK7Q8WTQ7 553 aa14.79□□□□□ -0.04
PNKP-221ENST00000627317 SPOCK2Q92563 424 aa14.79□□□□□ -0.04
PNKP-221ENST00000627317 TADA1Q96BN2 335 aa14.79□□□□□ -0.04
PNKP-221ENST00000627317 LRRC45Q96CN5 670 aa14.79□□□□□ -0.04
PNKP-221ENST00000627317 OXNAD1Q96HP4 312 aaPredicted RBP14.79□□□□□ -0.04
PNKP-221ENST00000627317 FSD1LQ9BXM9 530 aa14.79□□□□□ -0.04
PNKP-221ENST00000627317 ADGRE3Q9BY15 652 aa14.79□□□□□ -0.04
PNKP-221ENST00000627317 KDM4CQ9H3R0 1056 aa14.79□□□□□ -0.04
PNKP-221ENST00000627317 PCDH12Q9NPG4 1184 aa14.79□□□□□ -0.04
PNKP-221ENST00000627317 PAK5Q9P286 719 aa14.79□□□□□ -0.04
PNKP-221ENST00000627317 PHTF1Q9UMS5 762 aa14.79□□□□□ -0.04
PNKP-221ENST00000627317 RPL26L1Q9UNX3 145 aaKnown RBP14.79□□□□□ -0.04
PNKP-221ENST00000627317 ITM2BQ9Y287 266 aa14.79□□□□□ -0.04
PNKP-221ENST00000627317 AAR2Q9Y312 384 aaKnown RBP14.79□□□□□ -0.04
PNKP-221ENST00000627317 FADS3Q9Y5Q0 445 aa14.79□□□□□ -0.04
PNKP-221ENST00000627317 CHD8Q9HCK8 2581 aa14.78□□□□□ -0.04
PNKP-221ENST00000627317 CCDC188H7C350 402 aa14.78□□□□□ -0.04
PNKP-221ENST00000627317 FSBPO95073 299 aa14.78□□□□□ -0.04
PNKP-221ENST00000627317 KCNK5O95279 499 aa14.78□□□□□ -0.04
PNKP-221ENST00000627317 GAS8O95995 478 aa14.78□□□□□ -0.04
PNKP-221ENST00000627317 PRKCGP05129 697 aa14.78□□□□□ -0.04
PNKP-221ENST00000627317 ADRB1P08588 477 aa14.78□□□□□ -0.04
PNKP-221ENST00000627317 ETS1P14921 441 aa14.78□□□□□ -0.04
PNKP-221ENST00000627317 GNSP15586 552 aa14.78□□□□□ -0.04
PNKP-221ENST00000627317 CSRP1P21291 193 aaKnown RBP14.78□□□□□ -0.04
PNKP-221ENST00000627317 CD27P26842 260 aa14.78□□□□□ -0.04
PNKP-221ENST00000627317 FAM193AP78312 1265 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms