RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 CCR1P32246 355 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 KPNA1P52294 538 aaPredicted RBP8.94□□□□□ -0.98
VCL-206ENST00000623461 CYP4F2P78329 520 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 CYP4F3Q08477 520 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 CNSTQ6PJW8 725 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 RPRD1AQ96P16 312 aaPredicted RBP8.94□□□□□ -0.98
VCL-206ENST00000623461 ERMAPQ96PL5 475 aaPredicted RBP8.94□□□□□ -0.98
VCL-206ENST00000623461 NFS1Q9Y697 457 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 TMEM131LA2VDJ0 1609 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 MYOM1P52179 1685 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 FAM86B1E9PN63 330 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 CLPXO76031 633 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 IFNA7P01567 189 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 MAPKAPK2P49137 400 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 ASTE1Q2TB18 679 aaPredicted RBP8.94□□□□□ -0.98
VCL-206ENST00000623461 CDCA2Q69YH5 1023 aaPredicted RBP8.94□□□□□ -0.98
VCL-206ENST00000623461 MACC1Q6ZN28 852 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 GPRIN3Q6ZVF9 776 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 PTCHD4Q6ZW05 846 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 UTS2BQ765I0 119 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 ADGRG6Q86SQ4 1221 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 TOR4AQ9NXH8 423 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 COX7A2P14406 83 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 MAGP20916 626 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 ACO1P21399 889 aaKnown RBP8.94□□□□□ -0.98
VCL-206ENST00000623461 GRK4P32298 578 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 DSG3P32926 999 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 GPR15P49685 360 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 OXCT1P55809 520 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 ATP6V0D1P61421 351 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 STXBP5Q5T5C0 1151 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 APTXQ7Z2E3 356 aaKnown RBP8.94□□□□□ -0.98
VCL-206ENST00000623461 ADGRA1Q86SQ6 560 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 FAM151AQ8WW52 585 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 FAM126AQ9BYI3 521 aaPredicted RBP8.94□□□□□ -0.98
VCL-206ENST00000623461 SNCAIPQ9Y6H5 919 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 KHDRBS3O75525 346 aaKnown RBP8.94□□□□□ -0.98
VCL-206ENST00000623461 PCSK2P16519 638 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 FAUP35544 74 aaKnown RBP8.94□□□□□ -0.98
VCL-206ENST00000623461 TCF7P36402 384 aaPredicted RBP8.94□□□□□ -0.98
VCL-206ENST00000623461 UGT2B15P54855 530 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 MTMR2Q13614 643 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 ASB9Q96DX5 294 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 PTPRHQ9HD43 1115 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 CHD2O14647 1828 aaKnown RBP8.94□□□□□ -0.98
VCL-206ENST00000623461 ARHGEF33A8MVX0 844 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 ANKRD63C9JTQ0 380 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 ITM2AO43736 263 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 CYP2C18P33260 490 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 CCDC28AQ8IWP9 274 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 MEIOBQ8N635 442 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 HAS1Q92839 578 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 FAM136AQ96C01 138 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 DIRAS2Q96HU8 199 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 RNF38Q9H0F5 515 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 SETD4Q9NVD3 440 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 EXD2Q9NVH0 621 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 ZMYM5Q9UJ78 669 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 ANGPT4Q9Y264 503 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 KCNK1O00180 336 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 PLIN3O60664 434 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 ECDO95905 644 aaPredicted RBP8.94□□□□□ -0.98
VCL-206ENST00000623461 C8BP07358 591 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 CHRNGP07510 517 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 TKTL1P51854 596 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 CRADDP78560 199 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 DLG1Q12959 904 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 RALGDSQ12967 914 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 CAMK2GQ13555 558 aaPredicted RBP8.94□□□□□ -0.98
VCL-206ENST00000623461 C10orf120Q5SQS8 335 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 BHLHB9Q6PI77 547 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 MPP5Q8N3R9 675 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 C12orf43Q96C57 262 aaKnown RBP8.94□□□□□ -0.98
VCL-206ENST00000623461 MNTQ99583 582 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 SMAD5Q99717 465 aaKnown RBP8.94□□□□□ -0.98
VCL-206ENST00000623461 TTYH1Q9H313 450 aaPredicted RBP8.94□□□□□ -0.98
VCL-206ENST00000623461 QTRT2Q9H974 415 aaKnown RBP8.94□□□□□ -0.98
VCL-206ENST00000623461 MLXQ9UH92 298 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 MYH3P11055 1940 aa8.94□□□□□ -0.98
VCL-206ENST00000623461 EFCAB9A8MZ26 197 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 NPHS1O60500 1241 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 CREB1P16220 341 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 IL18Q14116 193 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 LSM12Q3MHD2 195 aaKnown RBP8.93□□□□□ -0.98
VCL-206ENST00000623461 IQSEC1Q6DN90 963 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 PHF10Q8WUB8 498 aaKnown RBP8.93□□□□□ -0.98
VCL-206ENST00000623461 TEFMQ96QE5 360 aaKnown RBP8.93□□□□□ -0.98
VCL-206ENST00000623461 TMEM138Q9NPI0 162 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.93□□□□□ -0.98
VCL-206ENST00000623461 CNTNAP2Q9UHC6 1331 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 OR6B1O95007 311 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 YBX3P16989 372 aaKnown RBP eCLIP8.93□□□□□ -0.982e-7■■□□□ 12.9
VCL-206ENST00000623461 GNAZP19086 355 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 RPL3P39023 403 aaKnown RBP8.93□□□□□ -0.98
VCL-206ENST00000623461 SLC26A2P50443 739 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 GNG2P59768 71 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 MVKQ03426 396 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 BNIP3Q12983 259 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 SMU1Q2TAY7 513 aa8.93□□□□□ -0.98
VCL-206ENST00000623461 ZZZ3Q8IYH5 903 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms