RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 AADATQ8N5Z0 425 aa19.94■□□□□ 0.78
PDLIM2-221ENST00000622702 PAF1Q8N7H5 531 aa19.94■□□□□ 0.78
PDLIM2-221ENST00000622702 LPCAT1Q8NF37 534 aa19.94■□□□□ 0.78
PDLIM2-221ENST00000622702 APOL2Q9BQE5 337 aa19.94■□□□□ 0.78
PDLIM2-221ENST00000622702 CASS4Q9NQ75 786 aa19.94■□□□□ 0.78
PDLIM2-221ENST00000622702 GDF3Q9NR23 364 aa19.94■□□□□ 0.78
PDLIM2-221ENST00000622702 FAM114A2Q9NRY5 505 aa19.94■□□□□ 0.78
PDLIM2-221ENST00000622702 ANAPC5Q9UJX4 755 aa19.94■□□□□ 0.78
PDLIM2-221ENST00000622702 ZFHX2Q9C0A1 2572 aaPredicted RBP19.94■□□□□ 0.78
PDLIM2-221ENST00000622702 ESYT3A0FGR9 886 aa19.93■□□□□ 0.78
PDLIM2-221ENST00000622702 UPK3BL1B0FP48 263 aa19.93■□□□□ 0.78
PDLIM2-221ENST00000622702 UPK3BL2E5RIL1 263 aa19.93■□□□□ 0.78
PDLIM2-221ENST00000622702 AP3B1O00203 1094 aa19.93■□□□□ 0.78
PDLIM2-221ENST00000622702 LMNAP02545 664 aaKnown RBP19.93■□□□□ 0.78
PDLIM2-221ENST00000622702 GRIA1P42261 906 aa19.93■□□□□ 0.78
PDLIM2-221ENST00000622702 NEK3P51956 506 aa19.93■□□□□ 0.78
PDLIM2-221ENST00000622702 EPHB1P54762 984 aa19.93■□□□□ 0.78
PDLIM2-221ENST00000622702 CCDC15Q0P6D6 951 aa19.93■□□□□ 0.78
PDLIM2-221ENST00000622702 CNTN1Q12860 1018 aa19.93■□□□□ 0.78
PDLIM2-221ENST00000622702 GALNT3Q14435 633 aa19.93■□□□□ 0.78
PDLIM2-221ENST00000622702 TRADDQ15628 312 aa19.93■□□□□ 0.78
PDLIM2-221ENST00000622702 USP30Q70CQ3 517 aa19.93■□□□□ 0.78
PDLIM2-221ENST00000622702 ZNF534Q76KX8 674 aa19.93■□□□□ 0.78
PDLIM2-221ENST00000622702 NDUFAF2Q8N183 169 aa19.93■□□□□ 0.78
PDLIM2-221ENST00000622702 FRMD1Q8N878 549 aa19.93■□□□□ 0.78
PDLIM2-221ENST00000622702 UBXN4Q92575 508 aa19.93■□□□□ 0.78
PDLIM2-221ENST00000622702 RAB7BQ96AH8 199 aa19.93■□□□□ 0.78
PDLIM2-221ENST00000622702 RMDN1Q96DB5 314 aa19.93■□□□□ 0.78
PDLIM2-221ENST00000622702 MCCC1Q96RQ3 725 aaPredicted RBP19.93■□□□□ 0.78
PDLIM2-221ENST00000622702 HINFPQ9BQA5 517 aa19.93■□□□□ 0.78
PDLIM2-221ENST00000622702 FRMD8Q9BZ67 464 aaPredicted RBP19.93■□□□□ 0.78
PDLIM2-221ENST00000622702 FAM129AQ9BZQ8 928 aa19.93■□□□□ 0.78
PDLIM2-221ENST00000622702 XAB2Q9HCS7 855 aaKnown RBP19.93■□□□□ 0.78
PDLIM2-221ENST00000622702 A0A0J9YYE9 177 aa19.92■□□□□ 0.78
PDLIM2-221ENST00000622702 TRBC1P01850 177 aa19.92■□□□□ 0.78
PDLIM2-221ENST00000622702 ACADMP11310 421 aa19.92■□□□□ 0.78
PDLIM2-221ENST00000622702 MLNP12872 115 aa19.92■□□□□ 0.78
PDLIM2-221ENST00000622702 ADRB3P13945 408 aa19.92■□□□□ 0.78
PDLIM2-221ENST00000622702 P2RY2P41231 377 aa19.92■□□□□ 0.78
PDLIM2-221ENST00000622702 CAV1Q03135 178 aa19.92■□□□□ 0.78
PDLIM2-221ENST00000622702 CDH17Q12864 832 aa19.92■□□□□ 0.78
PDLIM2-221ENST00000622702 LPAL2Q16609 132 aa19.92■□□□□ 0.78
PDLIM2-221ENST00000622702 MAP7D1Q3KQU3 841 aa19.92■□□□□ 0.78
PDLIM2-221ENST00000622702 PIP5KL1Q5T9C9 394 aa19.92■□□□□ 0.78
PDLIM2-221ENST00000622702 AGBL4Q5VU57 503 aa19.92■□□□□ 0.78
PDLIM2-221ENST00000622702 LRRC8BQ6P9F7 803 aa19.92■□□□□ 0.78
PDLIM2-221ENST00000622702 FBXL19Q6PCT2 694 aa19.92■□□□□ 0.78
PDLIM2-221ENST00000622702 PPP1R21Q6ZMI0 780 aa19.92■□□□□ 0.78
PDLIM2-221ENST00000622702 TTC7BQ86TV6 843 aa19.92■□□□□ 0.78
PDLIM2-221ENST00000622702 KBTBD6Q86V97 674 aa19.92■□□□□ 0.78
PDLIM2-221ENST00000622702 IFT20Q8IY31 132 aa19.92■□□□□ 0.78
PDLIM2-221ENST00000622702 HDDC3Q8N4P3 179 aa19.92■□□□□ 0.78
PDLIM2-221ENST00000622702 SLC25A41Q8N5S1 370 aa19.92■□□□□ 0.78
PDLIM2-221ENST00000622702 FAM160A2Q8N612 972 aaPredicted RBP19.92■□□□□ 0.78
PDLIM2-221ENST00000622702 SUMF1Q8NBK3 374 aa19.92■□□□□ 0.78
PDLIM2-221ENST00000622702 OR52K1Q8NGK4 314 aa19.92■□□□□ 0.78
PDLIM2-221ENST00000622702 ART4Q93070 314 aa19.92■□□□□ 0.78
PDLIM2-221ENST00000622702 SCRN2Q96FV2 425 aa19.92■□□□□ 0.78
PDLIM2-221ENST00000622702 SPACA7Q96KW9 195 aa19.92■□□□□ 0.78
PDLIM2-221ENST00000622702 CD93Q9NPY3 652 aa19.92■□□□□ 0.78
PDLIM2-221ENST00000622702 FBXL12Q9NXK8 326 aa19.92■□□□□ 0.78
PDLIM2-221ENST00000622702 USP36Q9P275 1121 aaKnown RBP19.92■□□□□ 0.78
PDLIM2-221ENST00000622702 RAB23Q9ULC3 237 aa19.92■□□□□ 0.78
PDLIM2-221ENST00000622702 FZD4Q9ULV1 537 aa19.92■□□□□ 0.78
PDLIM2-221ENST00000622702 SMG5Q9UPR3 1016 aaKnown RBP19.92■□□□□ 0.78
PDLIM2-221ENST00000622702 A0A1W2PP55 124 aa19.92■□□□□ 0.78
PDLIM2-221ENST00000622702 SLC7A4O43246 635 aa19.92■□□□□ 0.78
PDLIM2-221ENST00000622702 ZNF217O75362 1048 aa19.92■□□□□ 0.78
PDLIM2-221ENST00000622702 IGLV3-19P01714 112 aa19.92■□□□□ 0.78
PDLIM2-221ENST00000622702 NFKBIAP25963 317 aa19.92■□□□□ 0.78
PDLIM2-221ENST00000622702 ABL2P42684 1182 aa19.92■□□□□ 0.78
PDLIM2-221ENST00000622702 CUL1Q13616 776 aa19.92■□□□□ 0.78
PDLIM2-221ENST00000622702 ZDHHC24Q6UX98 284 aa19.92■□□□□ 0.78
PDLIM2-221ENST00000622702 USP45Q70EL2 814 aa19.92■□□□□ 0.78
PDLIM2-221ENST00000622702 CAND1Q86VP6 1230 aaKnown RBP19.92■□□□□ 0.78
PDLIM2-221ENST00000622702 RUBCNQ92622 972 aa19.92■□□□□ 0.78
PDLIM2-221ENST00000622702 SERPINB12Q96P63 405 aa19.92■□□□□ 0.78
PDLIM2-221ENST00000622702 LYSMD1Q96S90 227 aa19.92■□□□□ 0.78
PDLIM2-221ENST00000622702 OMDQ99983 421 aa19.92■□□□□ 0.78
PDLIM2-221ENST00000622702 ITM2CQ9NQX7 267 aa19.92■□□□□ 0.78
PDLIM2-221ENST00000622702 SERGEFQ9UGK8 458 aa19.92■□□□□ 0.78
PDLIM2-221ENST00000622702 CYP8B1Q9UNU6 501 aa19.92■□□□□ 0.78
PDLIM2-221ENST00000622702 PRR23AA6NEV1 266 aa19.91■□□□□ 0.78
PDLIM2-221ENST00000622702 CAPN8A6NHC0 703 aa19.91■□□□□ 0.78
PDLIM2-221ENST00000622702 PLK4O00444 970 aa19.91■□□□□ 0.78
PDLIM2-221ENST00000622702 AREL1O15033 823 aa19.91■□□□□ 0.78
PDLIM2-221ENST00000622702 RNASEH2AO75792 299 aaKnown RBP19.91■□□□□ 0.78
PDLIM2-221ENST00000622702 BCKDHBP21953 392 aa19.91■□□□□ 0.78
PDLIM2-221ENST00000622702 XPAP23025 273 aaPredicted RBP19.91■□□□□ 0.78
PDLIM2-221ENST00000622702 MAGEA3P43357 314 aa19.91■□□□□ 0.78
PDLIM2-221ENST00000622702 PLTPP55058 493 aa19.91■□□□□ 0.78
PDLIM2-221ENST00000622702 MSLNQ13421 630 aaPredicted RBP19.91■□□□□ 0.78
PDLIM2-221ENST00000622702 ASCL5Q7RTU5 278 aa19.91■□□□□ 0.78
PDLIM2-221ENST00000622702 DNAAF3Q8N9W5 541 aa19.91■□□□□ 0.78
PDLIM2-221ENST00000622702 SRPK1Q96SB4 655 aaKnown RBP19.91■□□□□ 0.78
PDLIM2-221ENST00000622702 ANKZF1Q9H8Y5 726 aa19.91■□□□□ 0.78
PDLIM2-221ENST00000622702 MAGEE1Q9HCI5 957 aa19.91■□□□□ 0.78
PDLIM2-221ENST00000622702 PCDH12Q9NPG4 1184 aa19.91■□□□□ 0.78
PDLIM2-221ENST00000622702 ZDHHC18Q9NUE0 388 aa19.91■□□□□ 0.78
PDLIM2-221ENST00000622702 NCKAP1Q9Y2A7 1128 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms