RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 SFT2D3Q587I9 215 aa12.02□□□□□ -0.49
TP53-227ENST00000622645 KLC3Q6P597 504 aa12.02□□□□□ -0.49
TP53-227ENST00000622645 SDCCAG8Q86SQ7 713 aaPredicted RBP12.02□□□□□ -0.49
TP53-227ENST00000622645 ABI1Q8IZP0 508 aa12.02□□□□□ -0.49
TP53-227ENST00000622645 OR52K2Q8NGK3 314 aa12.02□□□□□ -0.49
TP53-227ENST00000622645 CEP70Q8NHQ1 597 aa12.02□□□□□ -0.49
TP53-227ENST00000622645 GDPD5Q8WTR4 605 aa12.02□□□□□ -0.49
TP53-227ENST00000622645 TADA1Q96BN2 335 aa12.02□□□□□ -0.49
TP53-227ENST00000622645 DNAJC1Q96KC8 554 aaKnown RBP12.02□□□□□ -0.49
TP53-227ENST00000622645 YIPF3Q9GZM5 350 aa12.02□□□□□ -0.49
TP53-227ENST00000622645 MFSD1Q9H3U5 465 aa12.02□□□□□ -0.49
TP53-227ENST00000622645 SCOCQ9UIL1 159 aa12.02□□□□□ -0.49
TP53-227ENST00000622645 TCAF2A6NFQ2 919 aa12.02□□□□□ -0.49
TP53-227ENST00000622645 TRPC5OSA6NMA1 111 aa12.02□□□□□ -0.49
TP53-227ENST00000622645 MAP3K13O43283 966 aa12.02□□□□□ -0.49
TP53-227ENST00000622645 IGLV3-27P01718 113 aa12.02□□□□□ -0.49
TP53-227ENST00000622645 ART3Q13508 389 aa12.02□□□□□ -0.49
TP53-227ENST00000622645 CEACAM7Q14002 265 aa12.02□□□□□ -0.49
TP53-227ENST00000622645 ACAP2Q15057 778 aa12.02□□□□□ -0.49
TP53-227ENST00000622645 TRIP10Q15642 601 aa12.02□□□□□ -0.49
TP53-227ENST00000622645 SLC14A2Q15849 920 aa12.02□□□□□ -0.49
TP53-227ENST00000622645 PPP1R3AQ16821 1122 aa12.02□□□□□ -0.49
TP53-227ENST00000622645 BNC2Q6ZN30 1099 aaPredicted RBP12.02□□□□□ -0.49
TP53-227ENST00000622645 ISCA2Q86U28 154 aa12.02□□□□□ -0.49
TP53-227ENST00000622645 CUZD1Q86UP6 607 aa12.02□□□□□ -0.49
TP53-227ENST00000622645 OR13C4Q8NGS5 318 aa12.02□□□□□ -0.49
TP53-227ENST00000622645 SPPL2BQ8TCT7 592 aa12.02□□□□□ -0.49
TP53-227ENST00000622645 IFT43Q96FT9 208 aa12.02□□□□□ -0.49
TP53-227ENST00000622645 TSPAN17Q96FV3 270 aa12.02□□□□□ -0.49
TP53-227ENST00000622645 POLR1EQ9GZS1 481 aaKnown RBP12.02□□□□□ -0.49
TP53-227ENST00000622645 WDR41Q9HAD4 459 aa12.02□□□□□ -0.49
TP53-227ENST00000622645 PRPF19Q9UMS4 504 aaKnown RBP12.02□□□□□ -0.49
TP53-227ENST00000622645 VWA8A3KMH1 1905 aa12.01□□□□□ -0.49
TP53-227ENST00000622645 UBFD1O14562 309 aaKnown RBP12.01□□□□□ -0.49
TP53-227ENST00000622645 TLR5O60602 858 aa12.01□□□□□ -0.49
TP53-227ENST00000622645 MT-CO1P00395 513 aa12.01□□□□□ -0.49
TP53-227ENST00000622645 RBP1P09455 135 aa12.01□□□□□ -0.49
TP53-227ENST00000622645 ZCCHC18P0CG32 403 aa12.01□□□□□ -0.49
TP53-227ENST00000622645 MS4A2Q01362 244 aa12.01□□□□□ -0.49
TP53-227ENST00000622645 ZNF423Q2M1K9 1284 aa12.01□□□□□ -0.49
TP53-227ENST00000622645 PARP15Q460N3 678 aa12.01□□□□□ -0.49
TP53-227ENST00000622645 PIGGQ5H8A4 983 aa12.01□□□□□ -0.49
TP53-227ENST00000622645 RTP2Q5QGT7 225 aa12.01□□□□□ -0.49
TP53-227ENST00000622645 OR52E8Q6IFG1 317 aa12.01□□□□□ -0.49
TP53-227ENST00000622645 GK5Q6ZS86 529 aa12.01□□□□□ -0.49
TP53-227ENST00000622645 TMEM173Q86WV6 379 aaPredicted RBP12.01□□□□□ -0.49
TP53-227ENST00000622645 PDSS2Q86YH6 399 aa12.01□□□□□ -0.49
TP53-227ENST00000622645 RYBPQ8N488 228 aaPredicted RBP12.01□□□□□ -0.49
TP53-227ENST00000622645 SNX31Q8N9S9 440 aa12.01□□□□□ -0.49
TP53-227ENST00000622645 PHC3Q8NDX5 983 aa12.01□□□□□ -0.49
TP53-227ENST00000622645 GABPB2Q8TAK5 448 aaPredicted RBP12.01□□□□□ -0.49
TP53-227ENST00000622645 TMA16Q96EY4 203 aaKnown RBP12.01□□□□□ -0.49
TP53-227ENST00000622645 EFCAB1Q9HAE3 211 aa12.01□□□□□ -0.49
TP53-227ENST00000622645 OLA1Q9NTK5 396 aaKnown RBP12.01□□□□□ -0.49
TP53-227ENST00000622645 TMEM161AQ9NX61 479 aa12.01□□□□□ -0.49
TP53-227ENST00000622645 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.01□□□□□ -0.49
TP53-227ENST00000622645 MIA3Q5JRA6 1907 aa12.01□□□□□ -0.49
TP53-227ENST00000622645 MAGEA13PA6NCF6 341 aa12.01□□□□□ -0.49
TP53-227ENST00000622645 SLC22A2O15244 555 aa12.01□□□□□ -0.49
TP53-227ENST00000622645 RTN3O95197 1032 aaPredicted RBP12.01□□□□□ -0.49
TP53-227ENST00000622645 GOT2P00505 430 aaKnown RBP12.01□□□□□ -0.49
TP53-227ENST00000622645 PRSS56P0CW18 603 aa12.01□□□□□ -0.49
TP53-227ENST00000622645 TACR2P21452 398 aa12.01□□□□□ -0.49
TP53-227ENST00000622645 ADSLP30566 484 aaPredicted RBP12.01□□□□□ -0.49
TP53-227ENST00000622645 AQP4P55087 323 aa12.01□□□□□ -0.49
TP53-227ENST00000622645 SEMA3AQ14563 771 aa12.01□□□□□ -0.49
TP53-227ENST00000622645 ZNF235Q14590 738 aa12.01□□□□□ -0.49
TP53-227ENST00000622645 IL31Q6EBC2 164 aa12.01□□□□□ -0.49
TP53-227ENST00000622645 CLEC6AQ6EIG7 209 aa12.01□□□□□ -0.49
TP53-227ENST00000622645 ZNF549Q6P9A3 640 aa12.01□□□□□ -0.49
TP53-227ENST00000622645 SETD3Q86TU7 594 aaPredicted RBP12.01□□□□□ -0.49
TP53-227ENST00000622645 LGI2Q8N0V4 545 aa12.01□□□□□ -0.49
TP53-227ENST00000622645 PELI3Q8N2H9 469 aa12.01□□□□□ -0.49
TP53-227ENST00000622645 EXT2Q93063 718 aa12.01□□□□□ -0.49
TP53-227ENST00000622645 PTERQ96BW5 349 aa12.01□□□□□ -0.49
TP53-227ENST00000622645 SERPINI1Q99574 410 aa12.01□□□□□ -0.49
TP53-227ENST00000622645 VCXQ9H320 206 aa12.01□□□□□ -0.49
TP53-227ENST00000622645 MARCH5Q9NX47 278 aa12.01□□□□□ -0.49
TP53-227ENST00000622645 ATP6AP2A0A1C7CYW4 349 aa12□□□□□ -0.49
TP53-227ENST00000622645 CCDC162PA2VCL2 907 aa12□□□□□ -0.49
TP53-227ENST00000622645 OR6C75A6NL08 312 aa12□□□□□ -0.49
TP53-227ENST00000622645 PRAMEF11O60813 436 aa12□□□□□ -0.49
TP53-227ENST00000622645 TRPA1O75762 1119 aa12□□□□□ -0.49
TP53-227ENST00000622645 ATP6AP2O75787 350 aa12□□□□□ -0.49
TP53-227ENST00000622645 SUPT7LO94864 414 aa12□□□□□ -0.49
TP53-227ENST00000622645 WISP3O95389 354 aaPredicted RBP12□□□□□ -0.49
TP53-227ENST00000622645 ALDH2P05091 517 aa12□□□□□ -0.49
TP53-227ENST00000622645 HDCP19113 662 aa12□□□□□ -0.49
TP53-227ENST00000622645 TCN1P20061 433 aaPredicted RBP12□□□□□ -0.49
TP53-227ENST00000622645 SLC11A1P49279 550 aa12□□□□□ -0.49
TP53-227ENST00000622645 CDH13P55290 713 aa12□□□□□ -0.49
TP53-227ENST00000622645 MRPS22P82650 360 aaKnown RBP12□□□□□ -0.49
TP53-227ENST00000622645 TNK2Q07912 1038 aa12□□□□□ -0.49
TP53-227ENST00000622645 GPR17Q13304 367 aa12□□□□□ -0.49
TP53-227ENST00000622645 FLOT2Q14254 428 aa12□□□□□ -0.49
TP53-227ENST00000622645 RNF220Q5VTB9 566 aa12□□□□□ -0.49
TP53-227ENST00000622645 TAS1R1Q7RTX1 841 aa12□□□□□ -0.49
TP53-227ENST00000622645 PGAM4Q8N0Y7 254 aa12□□□□□ -0.49
TP53-227ENST00000622645 FAM156AQ8NDB6 213 aa12□□□□□ -0.49
TP53-227ENST00000622645 DBF4BQ8NFT6 615 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms