RNA–Protein interactions for RNA: ENST00000622464.4

AGAP3-226, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene AGAP3, Length 3,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-226ENST00000622464 CYP4F8P98187 520 aa13.13□□□□□ -0.31
AGAP3-226ENST00000622464 NRG1Q02297 640 aaPredicted RBP13.13□□□□□ -0.31
AGAP3-226ENST00000622464 IL10RBQ08334 325 aa13.13□□□□□ -0.31
AGAP3-226ENST00000622464 CUL3Q13618 768 aa13.13□□□□□ -0.31
AGAP3-226ENST00000622464 KRT72Q14CN4 511 aa13.13□□□□□ -0.31
AGAP3-226ENST00000622464 ATXN7L2Q5T6C5 722 aaPredicted RBP13.13□□□□□ -0.31
AGAP3-226ENST00000622464 RNF219Q5W0B1 726 aaPredicted RBP13.13□□□□□ -0.31
AGAP3-226ENST00000622464 FRMD7Q6ZUT3 714 aa13.13□□□□□ -0.31
AGAP3-226ENST00000622464 RNF148Q8N7C7 305 aa13.13□□□□□ -0.31
AGAP3-226ENST00000622464 ARL14EPQ8N8R7 260 aaPredicted RBP13.13□□□□□ -0.31
AGAP3-226ENST00000622464 SLC45A3Q96JT2 553 aa13.13□□□□□ -0.31
AGAP3-226ENST00000622464 TM6SF2Q9BZW4 377 aa13.13□□□□□ -0.31
AGAP3-226ENST00000622464 RNPEPL1Q9HAU8 725 aa13.13□□□□□ -0.31
AGAP3-226ENST00000622464 IGSF5Q9NSI5 407 aa13.13□□□□□ -0.31
AGAP3-226ENST00000622464 MTRRQ9UBK8 725 aa13.13□□□□□ -0.31
AGAP3-226ENST00000622464 AGO1Q9UL18 857 aaKnown RBP13.13□□□□□ -0.31
AGAP3-226ENST00000622464 REV3LO60673 3130 aa13.13□□□□□ -0.31
AGAP3-226ENST00000622464 PITPNM1O00562 1244 aa13.13□□□□□ -0.31
AGAP3-226ENST00000622464 PPP6CO00743 305 aa13.13□□□□□ -0.31
AGAP3-226ENST00000622464 BNIP3LO60238 219 aa13.13□□□□□ -0.31
AGAP3-226ENST00000622464 RHOCP08134 193 aa13.13□□□□□ -0.31
AGAP3-226ENST00000622464 CCND1P24385 295 aa13.13□□□□□ -0.31
AGAP3-226ENST00000622464 CDH13P55290 713 aa13.13□□□□□ -0.31
AGAP3-226ENST00000622464 TCHHL1Q5QJ38 904 aaPredicted RBP13.13□□□□□ -0.31
AGAP3-226ENST00000622464 SH2D4BQ5SQS7 431 aa13.13□□□□□ -0.31
AGAP3-226ENST00000622464 STXBP5Q5T5C0 1151 aa13.13□□□□□ -0.31
AGAP3-226ENST00000622464 TMCO4Q5TGY1 634 aa13.13□□□□□ -0.31
AGAP3-226ENST00000622464 LIPMQ5VYY2 423 aa13.13□□□□□ -0.31
AGAP3-226ENST00000622464 CILP2Q8IUL8 1156 aa13.13□□□□□ -0.31
AGAP3-226ENST00000622464 KLHDC8BQ8IXV7 354 aa13.13□□□□□ -0.31
AGAP3-226ENST00000622464 RAB3IL1Q8TBN0 382 aa13.13□□□□□ -0.31
AGAP3-226ENST00000622464 STYXQ8WUJ0 223 aa13.13□□□□□ -0.31
AGAP3-226ENST00000622464 SPATA17Q96L03 361 aa13.13□□□□□ -0.31
AGAP3-226ENST00000622464 CINPQ9BW66 212 aaPredicted RBP13.13□□□□□ -0.31
AGAP3-226ENST00000622464 ZNF334Q9HCZ1 680 aaPredicted RBP13.13□□□□□ -0.31
AGAP3-226ENST00000622464 CORO1CQ9ULV4 474 aaPredicted RBP13.13□□□□□ -0.31
AGAP3-226ENST00000622464 ATP6AP2A0A1C7CYW4 349 aa13.13□□□□□ -0.31
AGAP3-226ENST00000622464 ATP6AP2O75787 350 aa13.13□□□□□ -0.31
AGAP3-226ENST00000622464 TPBGLP0DKB5 382 aa13.13□□□□□ -0.31
AGAP3-226ENST00000622464 MBL2P11226 248 aaPredicted RBP13.13□□□□□ -0.31
AGAP3-226ENST00000622464 PAX3P23760 479 aa13.13□□□□□ -0.31
AGAP3-226ENST00000622464 OXCT1P55809 520 aa13.13□□□□□ -0.31
AGAP3-226ENST00000622464 SLC8B1Q6J4K2 584 aa13.13□□□□□ -0.31
AGAP3-226ENST00000622464 OTOP2Q7RTS6 562 aa13.13□□□□□ -0.31
AGAP3-226ENST00000622464 CNTN4Q8IWV2 1026 aa13.13□□□□□ -0.31
AGAP3-226ENST00000622464 OR6Y1Q8NGX8 325 aa13.13□□□□□ -0.31
AGAP3-226ENST00000622464 MRPL9Q9BYD2 267 aaKnown RBP13.13□□□□□ -0.31
AGAP3-226ENST00000622464 FCF1Q9Y324 198 aaKnown RBP13.13□□□□□ -0.31
AGAP3-226ENST00000622464 H3BNC9 293 aa13.12□□□□□ -0.31
AGAP3-226ENST00000622464 CSF2RAP15509 400 aa13.12□□□□□ -0.31
AGAP3-226ENST00000622464 HTR7P34969 479 aa13.12□□□□□ -0.31
AGAP3-226ENST00000622464 CCDC6Q16204 474 aa13.12□□□□□ -0.31
AGAP3-226ENST00000622464 UGP2Q16851 508 aa13.12□□□□□ -0.31
AGAP3-226ENST00000622464 LSM12Q3MHD2 195 aaKnown RBP13.12□□□□□ -0.31
AGAP3-226ENST00000622464 PARP15Q460N3 678 aa13.12□□□□□ -0.31
AGAP3-226ENST00000622464 CLEC6AQ6EIG7 209 aa13.12□□□□□ -0.31
AGAP3-226ENST00000622464 ZNF549Q6P9A3 640 aa13.12□□□□□ -0.31
AGAP3-226ENST00000622464 SLC39A5Q6ZMH5 540 aa13.12□□□□□ -0.31
AGAP3-226ENST00000622464 ULK2Q8IYT8 1036 aa13.12□□□□□ -0.31
AGAP3-226ENST00000622464 OR4K2Q8NGD2 314 aa13.12□□□□□ -0.31
AGAP3-226ENST00000622464 CFAP61Q8NHU2 1237 aa13.12□□□□□ -0.31
AGAP3-226ENST00000622464 CCDC97Q96F63 343 aaPredicted RBP13.12□□□□□ -0.31
AGAP3-226ENST00000622464 TMEM169Q96HH4 297 aa13.12□□□□□ -0.31
AGAP3-226ENST00000622464 ILKAPQ9H0C8 392 aaPredicted RBP13.12□□□□□ -0.31
AGAP3-226ENST00000622464 PDFQ9HBH1 243 aa13.12□□□□□ -0.31
AGAP3-226ENST00000622464 TRPM5Q9NZQ8 1165 aa13.12□□□□□ -0.31
AGAP3-226ENST00000622464 SLC7A8Q9UHI5 535 aa13.12□□□□□ -0.31
AGAP3-226ENST00000622464 PTGDR2Q9Y5Y4 395 aa13.12□□□□□ -0.31
AGAP3-226ENST00000622464 AIM2O14862 343 aa13.12□□□□□ -0.31
AGAP3-226ENST00000622464 KLHL2O95198 593 aa13.12□□□□□ -0.31
AGAP3-226ENST00000622464 SIX3O95343 332 aaPredicted RBP13.12□□□□□ -0.31
AGAP3-226ENST00000622464 PRAMEF12O95522 483 aa13.12□□□□□ -0.31
AGAP3-226ENST00000622464 CTPS1P17812 591 aa13.12□□□□□ -0.31
AGAP3-226ENST00000622464 TFEBP19484 476 aa13.12□□□□□ -0.31
AGAP3-226ENST00000622464 SLC11A2P49281 568 aa13.12□□□□□ -0.31
AGAP3-226ENST00000622464 SMAD3P84022 425 aaKnown RBP13.12□□□□□ -0.31
AGAP3-226ENST00000622464 ELAVL2Q12926 359 aaKnown RBP13.12□□□□□ -0.31
AGAP3-226ENST00000622464 SLC30A9Q6PML9 568 aa13.12□□□□□ -0.31
AGAP3-226ENST00000622464 TRIM67Q6ZTA4 783 aa13.12□□□□□ -0.31
AGAP3-226ENST00000622464 TEX26Q8N6G2 289 aa13.12□□□□□ -0.31
AGAP3-226ENST00000622464 ITFG2Q969R8 447 aa13.12□□□□□ -0.31
AGAP3-226ENST00000622464 TCF7L2Q9NQB0 619 aa13.12□□□□□ -0.31
AGAP3-226ENST00000622464 TMEM39AQ9NV64 488 aa13.12□□□□□ -0.31
AGAP3-226ENST00000622464 GALPQ9UBC7 116 aa13.12□□□□□ -0.31
AGAP3-226ENST00000622464 UBA2Q9UBT2 640 aaPredicted RBP13.12□□□□□ -0.31
AGAP3-226ENST00000622464 GIMAP2Q9UG22 337 aa13.12□□□□□ -0.31
AGAP3-226ENST00000622464 NCF1BA6NI72 391 aaPredicted RBP13.11□□□□□ -0.31
AGAP3-226ENST00000622464 NCF1CA8MVU1 366 aaPredicted RBP13.11□□□□□ -0.31
AGAP3-226ENST00000622464 TARM1B6A8C7 271 aa13.11□□□□□ -0.31
AGAP3-226ENST00000622464 GRID2O43424 1007 aa13.11□□□□□ -0.31
AGAP3-226ENST00000622464 S1PR4O95977 384 aa13.11□□□□□ -0.31
AGAP3-226ENST00000622464 C1RP00736 705 aa13.11□□□□□ -0.31
AGAP3-226ENST00000622464 SERPINF2P08697 491 aa13.11□□□□□ -0.31
AGAP3-226ENST00000622464 NCF1P14598 390 aaPredicted RBP13.11□□□□□ -0.31
AGAP3-226ENST00000622464 ALDH1A3P47895 512 aa13.11□□□□□ -0.31
AGAP3-226ENST00000622464 CSRP3P50461 194 aa13.11□□□□□ -0.31
AGAP3-226ENST00000622464 BTG3Q14201 252 aaPredicted RBP13.11□□□□□ -0.31
AGAP3-226ENST00000622464 RIPOR1Q6ZS17 1223 aa13.11□□□□□ -0.31
AGAP3-226ENST00000622464 TPGS1Q6ZTW0 290 aa13.11□□□□□ -0.31
AGAP3-226ENST00000622464 MDGA1Q8NFP4 955 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms