RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 CLEC11AQ9Y240 323 aa15.84■□□□□ 0.13
NPHP4-211ENST00000622020 AAR2Q9Y312 384 aaKnown RBP15.84■□□□□ 0.13
NPHP4-211ENST00000622020 TCAF1Q9Y4C2 921 aa15.84■□□□□ 0.13
NPHP4-211ENST00000622020 A0A0J9YYE9 177 aa15.83■□□□□ 0.12
NPHP4-211ENST00000622020 NME4O00746 187 aa15.83■□□□□ 0.12
NPHP4-211ENST00000622020 GIPC1O14908 333 aa15.83■□□□□ 0.12
NPHP4-211ENST00000622020 SLC22A2O15244 555 aa15.83■□□□□ 0.12
NPHP4-211ENST00000622020 HSPA1AP0DMV8 641 aaKnown RBP15.83■□□□□ 0.12
NPHP4-211ENST00000622020 HSPA1BP0DMV9 641 aaKnown RBP15.83■□□□□ 0.12
NPHP4-211ENST00000622020 DARSP14868 501 aaKnown RBP15.83■□□□□ 0.12
NPHP4-211ENST00000622020 PGFP49763 221 aa15.83■□□□□ 0.12
NPHP4-211ENST00000622020 STX1BP61266 288 aa15.83■□□□□ 0.12
NPHP4-211ENST00000622020 GRB7Q14451 532 aa15.83■□□□□ 0.12
NPHP4-211ENST00000622020 TECRLQ5HYJ1 363 aa15.83■□□□□ 0.12
NPHP4-211ENST00000622020 TFAP2DQ7Z6R9 452 aa15.83■□□□□ 0.12
NPHP4-211ENST00000622020 NAT16Q8N8M0 369 aa15.83■□□□□ 0.12
NPHP4-211ENST00000622020 EMID1Q96A84 441 aaPredicted RBP15.83■□□□□ 0.12
NPHP4-211ENST00000622020 NSUN5Q96P11 429 aaKnown RBP15.83■□□□□ 0.12
NPHP4-211ENST00000622020 AKTIPQ9H8T0 292 aa15.83■□□□□ 0.12
NPHP4-211ENST00000622020 GLOD4Q9HC38 313 aa15.83■□□□□ 0.12
NPHP4-211ENST00000622020 NSMCE4AQ9NXX6 385 aa15.83■□□□□ 0.12
NPHP4-211ENST00000622020 UTP6Q9NYH9 597 aaKnown RBP15.83■□□□□ 0.12
NPHP4-211ENST00000622020 CASTOR2A6NHX0 329 aa15.83■□□□□ 0.12
NPHP4-211ENST00000622020 MTSS1O43312 755 aa15.83■□□□□ 0.12
NPHP4-211ENST00000622020 USP41Q3LFD5 358 aa15.83■□□□□ 0.12
NPHP4-211ENST00000622020 SAMD4BQ5PRF9 694 aaKnown RBP15.83■□□□□ 0.12
NPHP4-211ENST00000622020 TMEM207Q6UWW9 146 aa15.83■□□□□ 0.12
NPHP4-211ENST00000622020 FASTKD5Q7L8L6 764 aaKnown RBP15.83■□□□□ 0.12
NPHP4-211ENST00000622020 ISOC1Q96CN7 298 aa15.83■□□□□ 0.12
NPHP4-211ENST00000622020 SEPHS2Q99611 448 aa15.83■□□□□ 0.12
NPHP4-211ENST00000622020 SLC25A23Q9BV35 468 aa15.83■□□□□ 0.12
NPHP4-211ENST00000622020 PAIP1Q9H074 479 aaKnown RBP15.83■□□□□ 0.12
NPHP4-211ENST00000622020 FAM124BQ9H5Z6 455 aaPredicted RBP15.83■□□□□ 0.12
NPHP4-211ENST00000622020 CD300AQ9UGN4 299 aa15.83■□□□□ 0.12
NPHP4-211ENST00000622020 USP22Q9UPT9 525 aa15.83■□□□□ 0.12
NPHP4-211ENST00000622020 TCRBV3S1A0A5B6 114 aa15.82■□□□□ 0.12
NPHP4-211ENST00000622020 H3BMM5 538 aa15.82■□□□□ 0.12
NPHP4-211ENST00000622020 INPP4BO15327 924 aa15.82■□□□□ 0.12
NPHP4-211ENST00000622020 B4GAT1O43505 415 aa15.82■□□□□ 0.12
NPHP4-211ENST00000622020 MMP3P08254 477 aa15.82■□□□□ 0.12
NPHP4-211ENST00000622020 LINC00032P0C843 101 aa15.82■□□□□ 0.12
NPHP4-211ENST00000622020 PIRTP0C851 137 aa15.82■□□□□ 0.12
NPHP4-211ENST00000622020 ESRRGP62508 458 aa15.82■□□□□ 0.12
NPHP4-211ENST00000622020 PLIN5Q00G26 463 aa15.82■□□□□ 0.12
NPHP4-211ENST00000622020 AGAP9Q5VTM2 703 aa15.82■□□□□ 0.12
NPHP4-211ENST00000622020 DPP9Q86TI2 863 aa15.82■□□□□ 0.12
NPHP4-211ENST00000622020 EPHX4Q8IUS5 362 aa15.82■□□□□ 0.12
NPHP4-211ENST00000622020 DCBLD1Q8N8Z6 715 aa15.82■□□□□ 0.12
NPHP4-211ENST00000622020 OR2T34Q8NGX1 318 aa15.82■□□□□ 0.12
NPHP4-211ENST00000622020 OR2T3Q8NH03 318 aa15.82■□□□□ 0.12
NPHP4-211ENST00000622020 VPS33AQ96AX1 596 aa15.82■□□□□ 0.12
NPHP4-211ENST00000622020 A0A1W2PPW3 197 aa15.82■□□□□ 0.12
NPHP4-211ENST00000622020 TREHO43280 583 aa15.82■□□□□ 0.12
NPHP4-211ENST00000622020 GJB3O75712 270 aa15.82■□□□□ 0.12
NPHP4-211ENST00000622020 ATE1O95260 518 aa15.82■□□□□ 0.12
NPHP4-211ENST00000622020 COL6A2P12110 1019 aa15.82■□□□□ 0.12
NPHP4-211ENST00000622020 CLCNKBP51801 687 aa15.82■□□□□ 0.12
NPHP4-211ENST00000622020 PRKAA2P54646 552 aa15.82■□□□□ 0.12
NPHP4-211ENST00000622020 CDKN2DP55273 166 aa15.82■□□□□ 0.12
NPHP4-211ENST00000622020 RPS6KA2Q15349 733 aa15.82■□□□□ 0.12
NPHP4-211ENST00000622020 RABL3Q5HYI8 236 aa15.82■□□□□ 0.12
NPHP4-211ENST00000622020 MAGEE2Q8TD90 523 aaPredicted RBP15.82■□□□□ 0.12
NPHP4-211ENST00000622020 NTAN1Q96AB6 310 aa15.82■□□□□ 0.12
NPHP4-211ENST00000622020 RANBP9Q96S59 729 aa15.82■□□□□ 0.12
NPHP4-211ENST00000622020 MEAF6Q9HAF1 191 aa15.82■□□□□ 0.12
NPHP4-211ENST00000622020 EML4Q9HC35 981 aaKnown RBP15.82■□□□□ 0.12
NPHP4-211ENST00000622020 TMEM181Q9P2C4 612 aa15.82■□□□□ 0.12
NPHP4-211ENST00000622020 MAP10Q9P2G4 905 aa15.82■□□□□ 0.12
NPHP4-211ENST00000622020 A0A1B0GTL3 188 aa15.81■□□□□ 0.12
NPHP4-211ENST00000622020 PTGESO14684 152 aa15.81■□□□□ 0.12
NPHP4-211ENST00000622020 SNAI1O95863 264 aaPredicted RBP15.81■□□□□ 0.12
NPHP4-211ENST00000622020 LTA4HP09960 611 aaKnown RBP15.81■□□□□ 0.12
NPHP4-211ENST00000622020 ALDH3B2P48448 385 aa15.81■□□□□ 0.12
NPHP4-211ENST00000622020 CCR3P51677 355 aa15.81■□□□□ 0.12
NPHP4-211ENST00000622020 NAA20P61599 178 aa15.81■□□□□ 0.12
NPHP4-211ENST00000622020 SH3BP2P78314 561 aa15.81■□□□□ 0.12
NPHP4-211ENST00000622020 MAPRE2Q15555 327 aa15.81■□□□□ 0.12
NPHP4-211ENST00000622020 ZIK1Q3SY52 487 aaPredicted RBP15.81■□□□□ 0.12
NPHP4-211ENST00000622020 ZNF513Q8N8E2 541 aaPredicted RBP15.81■□□□□ 0.12
NPHP4-211ENST00000622020 C2CD4AQ8NCU7 369 aaPredicted RBP15.81■□□□□ 0.12
NPHP4-211ENST00000622020 TFAP2CQ92754 450 aa15.81■□□□□ 0.12
NPHP4-211ENST00000622020 DCPSQ96C86 337 aaKnown RBP15.81■□□□□ 0.12
NPHP4-211ENST00000622020 PABPC5Q96DU9 382 aaKnown RBP15.81■□□□□ 0.12
NPHP4-211ENST00000622020 THAP11Q96EK4 314 aa15.81■□□□□ 0.12
NPHP4-211ENST00000622020 C19orf60Q96EN9 201 aa15.81■□□□□ 0.12
NPHP4-211ENST00000622020 TCF12Q99081 682 aa15.81■□□□□ 0.12
NPHP4-211ENST00000622020 VAT1Q99536 393 aa15.81■□□□□ 0.12
NPHP4-211ENST00000622020 ADI1Q9BV57 179 aa15.81■□□□□ 0.12
NPHP4-211ENST00000622020 MAF1Q9H063 256 aa15.81■□□□□ 0.12
NPHP4-211ENST00000622020 MID1IP1Q9NPA3 183 aa15.81■□□□□ 0.12
NPHP4-211ENST00000622020 ZNF510Q9Y2H8 683 aa15.81■□□□□ 0.12
NPHP4-211ENST00000622020 DHRS12A0PJE2 317 aa15.81■□□□□ 0.12
NPHP4-211ENST00000622020 SMIM10L2AP0DMW4 78 aa15.81■□□□□ 0.12
NPHP4-211ENST00000622020 SMIM10L2BP0DMW5 78 aa15.81■□□□□ 0.12
NPHP4-211ENST00000622020 HSPA8P11142 646 aaKnown RBP15.81■□□□□ 0.12
NPHP4-211ENST00000622020 CAPN3P20807 821 aa15.81■□□□□ 0.12
NPHP4-211ENST00000622020 CD247P20963 164 aa15.81■□□□□ 0.12
NPHP4-211ENST00000622020 PNPLA4P41247 253 aa15.81■□□□□ 0.12
NPHP4-211ENST00000622020 IREB2P48200 963 aaKnown RBP15.81■□□□□ 0.12
NPHP4-211ENST00000622020 PMS2P3Q13401 168 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms