RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 SMARCAL1Q9NZC9 954 aa4.43□□□□□ -1.7
BRCA1-229ENST00000621897 IL1RAPL1Q9NZN1 696 aa4.43□□□□□ -1.7
BRCA1-229ENST00000621897 IGHV4OR15-8A0A075B7B6 117 aa4.42□□□□□ -1.7
BRCA1-229ENST00000621897 TEX22C9J3V5 150 aa4.42□□□□□ -1.7
BRCA1-229ENST00000621897 EIF3FO00303 357 aaPredicted RBP4.42□□□□□ -1.7
BRCA1-229ENST00000621897 CHATP28329 748 aa4.42□□□□□ -1.7
BRCA1-229ENST00000621897 NLRP5P59047 1200 aa4.42□□□□□ -1.7
BRCA1-229ENST00000621897 ZBTB17Q13105 803 aa4.42□□□□□ -1.7
BRCA1-229ENST00000621897 AMZ1Q400G9 498 aa4.42□□□□□ -1.7
BRCA1-229ENST00000621897 ANKRD54Q6NXT1 300 aa4.42□□□□□ -1.7
BRCA1-229ENST00000621897 UNQ6126/PRO20091Q6UXV3 157 aa4.42□□□□□ -1.7
BRCA1-229ENST00000621897 C9orf139Q6ZV77 190 aa4.42□□□□□ -1.7
BRCA1-229ENST00000621897 TUBA1AQ71U36 451 aa4.42□□□□□ -1.7
BRCA1-229ENST00000621897 TADA2BQ86TJ2 420 aa4.42□□□□□ -1.7
BRCA1-229ENST00000621897 SATL1Q86VE3 508 aa4.42□□□□□ -1.7
BRCA1-229ENST00000621897 TMPRSS12Q86WS5 348 aa4.42□□□□□ -1.7
BRCA1-229ENST00000621897 RND1Q92730 232 aa4.42□□□□□ -1.7
BRCA1-229ENST00000621897 OTULINQ96BN8 352 aa4.42□□□□□ -1.7
BRCA1-229ENST00000621897 TUBA1CQ9BQE3 449 aa4.42□□□□□ -1.7
BRCA1-229ENST00000621897 SPRY4Q9C004 299 aa4.42□□□□□ -1.7
BRCA1-229ENST00000621897 EBF2Q9HAK2 575 aa4.42□□□□□ -1.7
BRCA1-229ENST00000621897 ZNF224Q9NZL3 707 aa4.42□□□□□ -1.7
BRCA1-229ENST00000621897 HSPB7Q9UBY9 170 aa4.42□□□□□ -1.7
BRCA1-229ENST00000621897 SIX4Q9UIU6 781 aa4.42□□□□□ -1.7
BRCA1-229ENST00000621897 KCNS2Q9ULS6 477 aa4.42□□□□□ -1.7
BRCA1-229ENST00000621897 CARD8Q9Y2G2 431 aa4.42□□□□□ -1.7
BRCA1-229ENST00000621897 PSAT1Q9Y617 370 aa4.42□□□□□ -1.7
BRCA1-229ENST00000621897 GOLGA6L10A0A0M3HER8 536 aa4.41□□□□□ -1.7
BRCA1-229ENST00000621897 CYSRT1A8MQ03 144 aa4.41□□□□□ -1.7
BRCA1-229ENST00000621897 ZNF587BE7ETH6 402 aa4.41□□□□□ -1.7
BRCA1-229ENST00000621897 IFRD1O00458 451 aaPredicted RBP4.41□□□□□ -1.7
BRCA1-229ENST00000621897 MID1O15344 667 aa4.41□□□□□ -1.7
BRCA1-229ENST00000621897 PLRG1O43660 514 aaKnown RBP4.41□□□□□ -1.7
BRCA1-229ENST00000621897 TACC1O75410 805 aa4.41□□□□□ -1.7
BRCA1-229ENST00000621897 EIF3JO75822 258 aaKnown RBP4.41□□□□□ -1.7
BRCA1-229ENST00000621897 GAS8-AS1O95177 125 aa4.41□□□□□ -1.7
BRCA1-229ENST00000621897 CENPBP07199 599 aaPredicted RBP4.41□□□□□ -1.7
BRCA1-229ENST00000621897 ETFAP13804 333 aa4.41□□□□□ -1.7
BRCA1-229ENST00000621897 AMD1P17707 334 aa4.41□□□□□ -1.7
BRCA1-229ENST00000621897 ACSM2AQ08AH3 577 aa4.41□□□□□ -1.7
BRCA1-229ENST00000621897 TNFAIP1Q13829 316 aa4.41□□□□□ -1.7
BRCA1-229ENST00000621897 TAF11Q15544 211 aa4.41□□□□□ -1.7
BRCA1-229ENST00000621897 NFIL3Q16649 462 aa4.41□□□□□ -1.7
BRCA1-229ENST00000621897 ATP13A5Q4VNC0 1218 aa4.41□□□□□ -1.7
BRCA1-229ENST00000621897 SGO1Q5FBB7 561 aa4.41□□□□□ -1.7
BRCA1-229ENST00000621897 ZNF766Q5HY98 468 aa4.41□□□□□ -1.7
BRCA1-229ENST00000621897 WDR73Q6P4I2 378 aa4.41□□□□□ -1.7
BRCA1-229ENST00000621897 SLC22A25Q6T423 547 aa4.41□□□□□ -1.7
BRCA1-229ENST00000621897 MTSS1LQ765P7 747 aa4.41□□□□□ -1.7
BRCA1-229ENST00000621897 LRRTM4Q86VH4 590 aa4.41□□□□□ -1.7
BRCA1-229ENST00000621897 FOXRED2Q8IWF2 684 aa4.41□□□□□ -1.7
BRCA1-229ENST00000621897 ANKRD42Q8N9B4 389 aa4.41□□□□□ -1.7
BRCA1-229ENST00000621897 TNIP2Q8NFZ5 429 aa4.41□□□□□ -1.7
BRCA1-229ENST00000621897 TANKQ92844 425 aa4.41□□□□□ -1.7
BRCA1-229ENST00000621897 SIN3AQ96ST3 1273 aa4.41□□□□□ -1.7
BRCA1-229ENST00000621897 HAUS8Q9BT25 410 aa4.41□□□□□ -1.7
BRCA1-229ENST00000621897 EVA1AQ9H8M9 152 aa4.41□□□□□ -1.7
BRCA1-229ENST00000621897 UBTD1Q9HAC8 227 aa4.41□□□□□ -1.7
BRCA1-229ENST00000621897 TMEM160Q9NX00 188 aa4.41□□□□□ -1.7
BRCA1-229ENST00000621897 C1RLQ9NZP8 487 aa4.41□□□□□ -1.7
BRCA1-229ENST00000621897 TINAGQ9UJW2 476 aa4.41□□□□□ -1.7
BRCA1-229ENST00000621897 PCDHAC2Q9Y5I4 1007 aa4.41□□□□□ -1.7
BRCA1-229ENST00000621897 A0A0G2JPF8 293 aa4.4□□□□□ -1.71
BRCA1-229ENST00000621897 HNRNPCL3B7ZW38 293 aa4.4□□□□□ -1.71
BRCA1-229ENST00000621897 BCAT2O15382 392 aaPredicted RBP4.4□□□□□ -1.71
BRCA1-229ENST00000621897 HNRNPCL1O60812 293 aaKnown RBP4.4□□□□□ -1.71
BRCA1-229ENST00000621897 HEXAP06865 529 aa4.4□□□□□ -1.71
BRCA1-229ENST00000621897 GALTP07902 379 aa4.4□□□□□ -1.71
BRCA1-229ENST00000621897 HNRNPCL4P0DMR1 293 aa4.4□□□□□ -1.71
BRCA1-229ENST00000621897 TCEA1P23193 301 aaKnown RBP4.4□□□□□ -1.71
BRCA1-229ENST00000621897 DGKAP23743 735 aa4.4□□□□□ -1.71
BRCA1-229ENST00000621897 PGM1P36871 562 aa4.4□□□□□ -1.71
BRCA1-229ENST00000621897 EIF2S3P41091 472 aaKnown RBP4.4□□□□□ -1.71
BRCA1-229ENST00000621897 GPD2P43304 727 aa4.4□□□□□ -1.71
BRCA1-229ENST00000621897 ZNF132P52740 706 aa4.4□□□□□ -1.71
BRCA1-229ENST00000621897 ITGADQ13349 1161 aa4.4□□□□□ -1.71
BRCA1-229ENST00000621897 VEPH1Q14D04 833 aa4.4□□□□□ -1.71
BRCA1-229ENST00000621897 PPP6R3Q5H9R7 873 aaPredicted RBP4.4□□□□□ -1.71
BRCA1-229ENST00000621897 HIST2H2BCQ6DN03 193 aa4.4□□□□□ -1.71
BRCA1-229ENST00000621897 HIST2H2BDQ6DRA6 164 aa4.4□□□□□ -1.71
BRCA1-229ENST00000621897 TMEM81Q6P7N7 255 aa4.4□□□□□ -1.71
BRCA1-229ENST00000621897 FBXO46Q6PJ61 603 aaPredicted RBP4.4□□□□□ -1.71
BRCA1-229ENST00000621897 EXOC3L1Q86VI1 746 aa4.4□□□□□ -1.71
BRCA1-229ENST00000621897 TMTC1Q8IUR5 882 aa4.4□□□□□ -1.71
BRCA1-229ENST00000621897 DHX40Q8IX18 779 aaKnown RBP4.4□□□□□ -1.71
BRCA1-229ENST00000621897 SLC35F3Q8IY50 421 aa4.4□□□□□ -1.71
BRCA1-229ENST00000621897 KBTBD3Q8NAB2 608 aa4.4□□□□□ -1.71
BRCA1-229ENST00000621897 FIG4Q92562 907 aa4.4□□□□□ -1.71
BRCA1-229ENST00000621897 CD101Q93033 1021 aa4.4□□□□□ -1.71
BRCA1-229ENST00000621897 BBS4Q96RK4 519 aa4.4□□□□□ -1.71
BRCA1-229ENST00000621897 INTS2Q9H0H0 1204 aaKnown RBP4.4□□□□□ -1.71
BRCA1-229ENST00000621897 ESRP2Q9H6T0 727 aaKnown RBP4.4□□□□□ -1.71
BRCA1-229ENST00000621897 C20orf141Q9NUB4 165 aa4.4□□□□□ -1.71
BRCA1-229ENST00000621897 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.4□□□□□ -1.71
BRCA1-229ENST00000621897 GREB1LQ9C091 1923 aaPredicted RBP4.39□□□□□ -1.71
BRCA1-229ENST00000621897 LMX1BO60663 402 aa4.39□□□□□ -1.71
BRCA1-229ENST00000621897 MTA2O94776 668 aa4.39□□□□□ -1.71
BRCA1-229ENST00000621897 CYC1P08574 325 aa4.39□□□□□ -1.71
BRCA1-229ENST00000621897 AGAP20933 346 aa4.39□□□□□ -1.71
BRCA1-229ENST00000621897 GPTP24298 496 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms