RNA–Protein interactions for RNA: ENST00000620843.1

LPCAT3-213, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 5

Gene LPCAT3, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-213ENST00000620843 KCNE2Q9Y6J6 123 aa6.67□□□□□ -1.34
LPCAT3-213ENST00000620843 HFM1A2PYH4 1435 aa6.67□□□□□ -1.34
LPCAT3-213ENST00000620843 ATRNO75882 1429 aa6.67□□□□□ -1.34
LPCAT3-213ENST00000620843 GLI3P10071 1580 aa6.66□□□□□ -1.34
LPCAT3-213ENST00000620843 ZNF814B7Z6K7 855 aa6.66□□□□□ -1.34
LPCAT3-213ENST00000620843 EBAG9O00559 213 aa6.66□□□□□ -1.34
LPCAT3-213ENST00000620843 MLYCDO95822 493 aa6.66□□□□□ -1.34
LPCAT3-213ENST00000620843 IRF1P10914 325 aa6.66□□□□□ -1.34
LPCAT3-213ENST00000620843 NFKBIAP25963 317 aa6.66□□□□□ -1.34
LPCAT3-213ENST00000620843 TTKP33981 857 aa6.66□□□□□ -1.34
LPCAT3-213ENST00000620843 PTGER1P34995 402 aa6.66□□□□□ -1.34
LPCAT3-213ENST00000620843 MLH1P40692 756 aa6.66□□□□□ -1.34
LPCAT3-213ENST00000620843 GPR12P47775 334 aa6.66□□□□□ -1.34
LPCAT3-213ENST00000620843 GNAQP50148 359 aa6.66□□□□□ -1.34
LPCAT3-213ENST00000620843 CLNS1AP54105 237 aaKnown RBP6.66□□□□□ -1.34
LPCAT3-213ENST00000620843 OLR1P78380 273 aa6.66□□□□□ -1.34
LPCAT3-213ENST00000620843 MTX1Q13505 466 aa6.66□□□□□ -1.34
LPCAT3-213ENST00000620843 PDE1CQ14123 709 aaPredicted RBP6.66□□□□□ -1.34
LPCAT3-213ENST00000620843 MED22Q15528 200 aa6.66□□□□□ -1.34
LPCAT3-213ENST00000620843 SRSF7Q16629 238 aaKnown RBP eCLIP6.66□□□□□ -1.34
LPCAT3-213ENST00000620843 SPATA1Q5VX52 437 aa6.66□□□□□ -1.34
LPCAT3-213ENST00000620843 KLHL24Q6TFL4 600 aa6.66□□□□□ -1.34
LPCAT3-213ENST00000620843 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.66□□□□□ -1.34
LPCAT3-213ENST00000620843 ZDHHC23Q8IYP9 409 aa6.66□□□□□ -1.34
LPCAT3-213ENST00000620843 NTN5Q8WTR8 489 aaPredicted RBP6.66□□□□□ -1.34
LPCAT3-213ENST00000620843 USP6NLQ92738 828 aa6.66□□□□□ -1.34
LPCAT3-213ENST00000620843 BBS4Q96RK4 519 aa6.66□□□□□ -1.34
LPCAT3-213ENST00000620843 H2AFJQ9BTM1 129 aa6.66□□□□□ -1.34
LPCAT3-213ENST00000620843 LHPPQ9H008 270 aa6.66□□□□□ -1.34
LPCAT3-213ENST00000620843 MUC13Q9H3R2 512 aa6.66□□□□□ -1.34
LPCAT3-213ENST00000620843 NCKIPSDQ9NZQ3 722 aa6.66□□□□□ -1.34
LPCAT3-213ENST00000620843 INTS6Q9UL03 887 aaKnown RBP6.66□□□□□ -1.34
LPCAT3-213ENST00000620843 COG5Q9UP83 839 aa6.66□□□□□ -1.34
LPCAT3-213ENST00000620843 AFF2P51816 1311 aa6.66□□□□□ -1.34
LPCAT3-213ENST00000620843 ZMYM2Q9UBW7 1377 aa6.66□□□□□ -1.34
LPCAT3-213ENST00000620843 TRPM3Q9HCF6 1732 aaPredicted RBP6.65□□□□□ -1.34
LPCAT3-213ENST00000620843 RGPD8O14715 1765 aaPredicted RBP6.65□□□□□ -1.34
LPCAT3-213ENST00000620843 TYW5A2RUC4 315 aaKnown RBP6.65□□□□□ -1.34
LPCAT3-213ENST00000620843 TTC36A6NLP5 189 aa6.65□□□□□ -1.34
LPCAT3-213ENST00000620843 LRRC53A6NM62 1247 aa6.65□□□□□ -1.34
LPCAT3-213ENST00000620843 CLDN7O95471 211 aa6.65□□□□□ -1.34
LPCAT3-213ENST00000620843 ZNF8P17098 575 aaPredicted RBP6.65□□□□□ -1.34
LPCAT3-213ENST00000620843 CD38P28907 300 aa6.65□□□□□ -1.34
LPCAT3-213ENST00000620843 RYKP34925 604 aa6.65□□□□□ -1.34
LPCAT3-213ENST00000620843 CLCN5P51795 746 aa6.65□□□□□ -1.34
LPCAT3-213ENST00000620843 FOXD4Q12950 439 aaPredicted RBP6.65□□□□□ -1.34
LPCAT3-213ENST00000620843 PRKG2Q13237 762 aa6.65□□□□□ -1.34
LPCAT3-213ENST00000620843 INPP5JQ15735 1006 aaPredicted RBP6.65□□□□□ -1.34
LPCAT3-213ENST00000620843 CCNG2Q16589 344 aa6.65□□□□□ -1.34
LPCAT3-213ENST00000620843 MEA1Q16626 185 aa6.65□□□□□ -1.34
LPCAT3-213ENST00000620843 SMN1Q16637 294 aaKnown RBP6.65□□□□□ -1.34
LPCAT3-213ENST00000620843 C10orf25Q5T742 122 aa6.65□□□□□ -1.34
LPCAT3-213ENST00000620843 ZNF626Q68DY1 528 aa6.65□□□□□ -1.34
LPCAT3-213ENST00000620843 LRRC8EQ6NSJ5 796 aa6.65□□□□□ -1.34
LPCAT3-213ENST00000620843 TMEM71Q6P5X7 295 aa6.65□□□□□ -1.34
LPCAT3-213ENST00000620843 IKBIPQ70UQ0 350 aa6.65□□□□□ -1.34
LPCAT3-213ENST00000620843 TDRPQ86YL5 185 aa6.65□□□□□ -1.34
LPCAT3-213ENST00000620843 DHX40Q8IX18 779 aaKnown RBP6.65□□□□□ -1.34
LPCAT3-213ENST00000620843 DNAJC10Q8IXB1 793 aa6.65□□□□□ -1.34
LPCAT3-213ENST00000620843 PDILTQ8N807 584 aa6.65□□□□□ -1.34
LPCAT3-213ENST00000620843 CEP76Q8TAP6 659 aa6.65□□□□□ -1.34
LPCAT3-213ENST00000620843 SMARCE1Q969G3 411 aa6.65□□□□□ -1.34
LPCAT3-213ENST00000620843 RNF183Q96D59 192 aa6.65□□□□□ -1.34
LPCAT3-213ENST00000620843 CRAMP1Q96RY5 1269 aa6.65□□□□□ -1.34
LPCAT3-213ENST00000620843 YME1L1Q96TA2 773 aa6.65□□□□□ -1.34
LPCAT3-213ENST00000620843 PRKRIP1Q9H875 184 aaPredicted RBP6.65□□□□□ -1.34
LPCAT3-213ENST00000620843 MAP6D1Q9H9H5 199 aa6.65□□□□□ -1.34
LPCAT3-213ENST00000620843 SCPEP1Q9HB40 452 aa6.65□□□□□ -1.34
LPCAT3-213ENST00000620843 SPATS2LQ9NUQ6 558 aaKnown RBP6.65□□□□□ -1.34
LPCAT3-213ENST00000620843 SEPT11Q9NVA2 429 aaKnown RBP6.65□□□□□ -1.34
LPCAT3-213ENST00000620843 CARD8Q9Y2G2 431 aa6.65□□□□□ -1.34
LPCAT3-213ENST00000620843 DYTNA2CJ06 578 aa6.64□□□□□ -1.35
LPCAT3-213ENST00000620843 A6NCN8 305 aa6.64□□□□□ -1.35
LPCAT3-213ENST00000620843 HSPB2A8KAH6 182 aa6.64□□□□□ -1.35
LPCAT3-213ENST00000620843 AP3D1O14617 1153 aa6.64□□□□□ -1.35
LPCAT3-213ENST00000620843 LIASO43766 372 aa6.64□□□□□ -1.35
LPCAT3-213ENST00000620843 ATG13O75143 517 aa6.64□□□□□ -1.35
LPCAT3-213ENST00000620843 HDAC4P56524 1084 aa6.64□□□□□ -1.35
LPCAT3-213ENST00000620843 TRIP6Q15654 476 aaKnown RBP6.64□□□□□ -1.35
LPCAT3-213ENST00000620843 EZH2Q15910 746 aaKnown RBP6.64□□□□□ -1.35
LPCAT3-213ENST00000620843 HSPB2Q16082 182 aa6.64□□□□□ -1.35
LPCAT3-213ENST00000620843 HIST2H2ACQ16777 129 aaPredicted RBP6.64□□□□□ -1.35
LPCAT3-213ENST00000620843 MTX3Q5HYI7 312 aa6.64□□□□□ -1.35
LPCAT3-213ENST00000620843 CES5AQ6NT32 575 aa6.64□□□□□ -1.35
LPCAT3-213ENST00000620843 CYP20A1Q6UW02 462 aa6.64□□□□□ -1.35
LPCAT3-213ENST00000620843 FRMD1Q8N878 549 aa6.64□□□□□ -1.35
LPCAT3-213ENST00000620843 TMEM116Q8NCL8 245 aa6.64□□□□□ -1.35
LPCAT3-213ENST00000620843 TMEM174Q8WUU8 243 aa6.64□□□□□ -1.35
LPCAT3-213ENST00000620843 GTF3C6Q969F1 213 aa6.64□□□□□ -1.35
LPCAT3-213ENST00000620843 COQ8BQ96D53 544 aa6.64□□□□□ -1.35
LPCAT3-213ENST00000620843 PABPC5Q96DU9 382 aaKnown RBP6.64□□□□□ -1.35
LPCAT3-213ENST00000620843 ZNF333Q96JL9 665 aa6.64□□□□□ -1.35
LPCAT3-213ENST00000620843 GHITMQ9H3K2 345 aa6.64□□□□□ -1.35
LPCAT3-213ENST00000620843 MVB12BQ9H7P6 319 aa6.64□□□□□ -1.35
LPCAT3-213ENST00000620843 TRNAU1APQ9NX07 287 aaKnown RBP6.64□□□□□ -1.35
LPCAT3-213ENST00000620843 ZNF70Q9UC06 446 aaPredicted RBP6.64□□□□□ -1.35
LPCAT3-213ENST00000620843 CORO1CQ9ULV4 474 aaPredicted RBP6.64□□□□□ -1.35
LPCAT3-213ENST00000620843 GPR34Q9UPC5 381 aa6.64□□□□□ -1.35
LPCAT3-213ENST00000620843 FRMD4BQ9Y2L6 1034 aa6.64□□□□□ -1.35
LPCAT3-213ENST00000620843 FAM96BQ9Y3D0 163 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms