RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 ANKFN1Q8N957 763 aa20.49■□□□□ 0.87
NEK3-208ENST00000618534 FAM47BQ8NA70 645 aa20.49■□□□□ 0.87
NEK3-208ENST00000618534 IRGQQ8WZA9 623 aa20.49■□□□□ 0.87
NEK3-208ENST00000618534 LMCD1Q9NZU5 365 aa20.49■□□□□ 0.87
NEK3-208ENST00000618534 MTF2Q9Y483 593 aaPredicted RBP20.49■□□□□ 0.87
NEK3-208ENST00000618534 PTCH2Q9Y6C5 1203 aa20.49■□□□□ 0.87
NEK3-208ENST00000618534 FAM155AB1AL88 458 aaPredicted RBP20.48■□□□□ 0.87
NEK3-208ENST00000618534 ALDOCP09972 364 aaKnown RBP20.48■□□□□ 0.87
NEK3-208ENST00000618534 GALK1P51570 392 aa20.48■□□□□ 0.87
NEK3-208ENST00000618534 AFF1P51825 1210 aaKnown RBP20.48■□□□□ 0.87
NEK3-208ENST00000618534 PRKCQQ04759 706 aa20.48■□□□□ 0.87
NEK3-208ENST00000618534 HACD2Q6Y1H2 254 aa20.48■□□□□ 0.87
NEK3-208ENST00000618534 KIAA0408Q6ZU52 694 aa20.48■□□□□ 0.87
NEK3-208ENST00000618534 LARP4Q71RC2 724 aaKnown RBP eCLIP20.48■□□□□ 0.87
NEK3-208ENST00000618534 DPP9Q86TI2 863 aa20.48■□□□□ 0.87
NEK3-208ENST00000618534 RETREG3Q86VR2 466 aa20.48■□□□□ 0.87
NEK3-208ENST00000618534 C3orf58Q8NDZ4 430 aa20.48■□□□□ 0.87
NEK3-208ENST00000618534 OR2T34Q8NGX1 318 aa20.48■□□□□ 0.87
NEK3-208ENST00000618534 OR2T3Q8NH03 318 aa20.48■□□□□ 0.87
NEK3-208ENST00000618534 LRCH3Q96II8 777 aa20.48■□□□□ 0.87
NEK3-208ENST00000618534 C3orf30Q96M34 536 aa20.48■□□□□ 0.87
NEK3-208ENST00000618534 UPF3AQ9H1J1 476 aaKnown RBP20.48■□□□□ 0.87
NEK3-208ENST00000618534 CIDEBQ9UHD4 219 aa20.48■□□□□ 0.87
NEK3-208ENST00000618534 NYNRINQ9P2P1 1898 aaKnown RBP20.48■□□□□ 0.87
NEK3-208ENST00000618534 SAC3D1A6NKF1 404 aa20.48■□□□□ 0.87
NEK3-208ENST00000618534 RBP1P09455 135 aa20.48■□□□□ 0.87
NEK3-208ENST00000618534 CLCN5P51795 746 aa20.48■□□□□ 0.87
NEK3-208ENST00000618534 PRAMEP78395 509 aa20.48■□□□□ 0.87
NEK3-208ENST00000618534 PPP4R4Q6NUP7 873 aa20.48■□□□□ 0.87
NEK3-208ENST00000618534 MYLPFQ96A32 169 aa20.48■□□□□ 0.87
NEK3-208ENST00000618534 MAML3Q96JK9 1138 aa20.48■□□□□ 0.87
NEK3-208ENST00000618534 PRKD2Q9BZL6 878 aa20.48■□□□□ 0.87
NEK3-208ENST00000618534 ALG9Q9H6U8 611 aa20.48■□□□□ 0.87
NEK3-208ENST00000618534 SQORQ9Y6N5 450 aa20.48■□□□□ 0.87
NEK3-208ENST00000618534 PFDN1O60925 122 aa20.47■□□□□ 0.87
NEK3-208ENST00000618534 CLCNKBP51801 687 aa20.47■□□□□ 0.87
NEK3-208ENST00000618534 NME5P56597 212 aa20.47■□□□□ 0.87
NEK3-208ENST00000618534 LPIN1Q14693 890 aa20.47■□□□□ 0.87
NEK3-208ENST00000618534 MAP7D1Q3KQU3 841 aa20.47■□□□□ 0.87
NEK3-208ENST00000618534 HECTD2Q5U5R9 776 aa20.47■□□□□ 0.87
NEK3-208ENST00000618534 ERMP1Q7Z2K6 904 aa20.47■□□□□ 0.87
NEK3-208ENST00000618534 TMEM86AQ8N2M4 240 aa20.47■□□□□ 0.87
NEK3-208ENST00000618534 UBXN10Q96LJ8 280 aa20.47■□□□□ 0.87
NEK3-208ENST00000618534 CLK4Q9HAZ1 481 aaKnown RBP20.47■□□□□ 0.87
NEK3-208ENST00000618534 IL1RL2Q9HB29 575 aa20.47■□□□□ 0.87
NEK3-208ENST00000618534 SFMBT1Q9UHJ3 866 aa20.47■□□□□ 0.87
NEK3-208ENST00000618534 SUPT7LO94864 414 aa20.47■□□□□ 0.87
NEK3-208ENST00000618534 STAMBPO95630 424 aa20.47■□□□□ 0.87
NEK3-208ENST00000618534 HSPA8P11142 646 aaKnown RBP20.47■□□□□ 0.87
NEK3-208ENST00000618534 BMP2P12643 396 aa20.47■□□□□ 0.87
NEK3-208ENST00000618534 LEPRP48357 1165 aaKnown RBP20.47■□□□□ 0.87
NEK3-208ENST00000618534 KCNC1P48547 511 aa20.47■□□□□ 0.87
NEK3-208ENST00000618534 ADARP55265 1226 aaKnown RBP20.47■□□□□ 0.87
NEK3-208ENST00000618534 WNT3AP56704 352 aa20.47■□□□□ 0.87
NEK3-208ENST00000618534 TUBA4AP68366 448 aa20.47■□□□□ 0.87
NEK3-208ENST00000618534 GALNT1Q10472 559 aaPredicted RBP20.47■□□□□ 0.87
NEK3-208ENST00000618534 ACAP2Q15057 778 aa20.47■□□□□ 0.87
NEK3-208ENST00000618534 HM13Q8TCT9 377 aa20.47■□□□□ 0.87
NEK3-208ENST00000618534 TFAP2CQ92754 450 aa20.47■□□□□ 0.87
NEK3-208ENST00000618534 C19orf60Q96EN9 201 aa20.47■□□□□ 0.87
NEK3-208ENST00000618534 TCF12Q99081 682 aa20.47■□□□□ 0.87
NEK3-208ENST00000618534 ARMC1Q9NVT9 282 aa20.47■□□□□ 0.87
NEK3-208ENST00000618534 RHBDL2Q9NX52 303 aa20.47■□□□□ 0.87
NEK3-208ENST00000618534 CDH9Q9ULB4 789 aa20.47■□□□□ 0.87
NEK3-208ENST00000618534 IMPDH1P20839 514 aa20.46■□□□□ 0.87
NEK3-208ENST00000618534 GPX3P22352 226 aa20.46■□□□□ 0.87
NEK3-208ENST00000618534 STX1BP61266 288 aa20.46■□□□□ 0.87
NEK3-208ENST00000618534 PLOD1Q02809 727 aaPredicted RBP20.46■□□□□ 0.87
NEK3-208ENST00000618534 MFSD10Q14728 455 aa20.46■□□□□ 0.87
NEK3-208ENST00000618534 TMEM207Q6UWW9 146 aa20.46■□□□□ 0.87
NEK3-208ENST00000618534 LDB1Q86U70 411 aaPredicted RBP20.46■□□□□ 0.87
NEK3-208ENST00000618534 SLC22A9Q8IVM8 553 aa20.46■□□□□ 0.87
NEK3-208ENST00000618534 DIS3LQ8TF46 1054 aaKnown RBP20.46■□□□□ 0.87
NEK3-208ENST00000618534 ABHD16BQ9H3Z7 469 aa20.46■□□□□ 0.87
NEK3-208ENST00000618534 NR5A2O00482 541 aa20.46■□□□□ 0.87
NEK3-208ENST00000618534 NME4O00746 187 aa20.46■□□□□ 0.87
NEK3-208ENST00000618534 PAGE1O75459 146 aa20.46■□□□□ 0.87
NEK3-208ENST00000618534 GNAO1P09471 354 aa20.46■□□□□ 0.87
NEK3-208ENST00000618534 UGT1A6P19224 532 aa20.46■□□□□ 0.87
NEK3-208ENST00000618534 BDNFP23560 247 aa20.46■□□□□ 0.87
NEK3-208ENST00000618534 ACADVLP49748 655 aa20.46■□□□□ 0.87
NEK3-208ENST00000618534 ADAM17P78536 824 aa20.46■□□□□ 0.87
NEK3-208ENST00000618534 ZNF678Q5SXM1 525 aa20.46■□□□□ 0.87
NEK3-208ENST00000618534 GPR158Q5T848 1215 aa20.46■□□□□ 0.87
NEK3-208ENST00000618534 SH3RF2Q8TEC5 729 aa20.46■□□□□ 0.87
NEK3-208ENST00000618534 TSPAN17Q96FV3 270 aa20.46■□□□□ 0.87
NEK3-208ENST00000618534 CSNK1G1Q9HCP0 422 aa20.46■□□□□ 0.87
NEK3-208ENST00000618534 GIMAP2Q9UG22 337 aa20.46■□□□□ 0.87
NEK3-208ENST00000618534 SLC8A2Q9UPR5 921 aa20.46■□□□□ 0.87
NEK3-208ENST00000618534 AURKCQ9UQB9 309 aa20.46■□□□□ 0.87
NEK3-208ENST00000618534 CCL22O00626 93 aa20.45■□□□□ 0.86
NEK3-208ENST00000618534 MSI1O43347 362 aaKnown RBP20.45■□□□□ 0.86
NEK3-208ENST00000618534 IGLV3-25P01717 112 aa20.45■□□□□ 0.86
NEK3-208ENST00000618534 CYP2C18P33260 490 aa20.45■□□□□ 0.86
NEK3-208ENST00000618534 ATP4BP51164 291 aa20.45■□□□□ 0.86
NEK3-208ENST00000618534 CDKN2DP55273 166 aa20.45■□□□□ 0.86
NEK3-208ENST00000618534 SLC14A2Q15849 920 aa20.45■□□□□ 0.86
NEK3-208ENST00000618534 KIF19Q2TAC6 998 aa20.45■□□□□ 0.86
NEK3-208ENST00000618534 IQSEC1Q6DN90 963 aa20.45■□□□□ 0.86
NEK3-208ENST00000618534 PIM3Q86V86 326 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms