RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 AP1S1P61966 158 aa22.34■■□□□ 1.17
NEDD4L-237ENST00000617539 NR0B2Q15466 257 aa22.34■■□□□ 1.17
NEDD4L-237ENST00000617539 TMCO3Q6UWJ1 677 aa22.34■■□□□ 1.17
NEDD4L-237ENST00000617539 LIPIQ6XZB0 460 aa22.34■■□□□ 1.17
NEDD4L-237ENST00000617539 CPNE8Q86YQ8 564 aa22.34■■□□□ 1.17
NEDD4L-237ENST00000617539 SNIP1Q8TAD8 396 aaKnown RBP22.34■■□□□ 1.17
NEDD4L-237ENST00000617539 TEKT4Q8WW24 435 aa22.34■■□□□ 1.17
NEDD4L-237ENST00000617539 DEPDC7Q96QD5 511 aa22.34■■□□□ 1.17
NEDD4L-237ENST00000617539 EVA1BQ9NVM1 165 aa22.34■■□□□ 1.17
NEDD4L-237ENST00000617539 CFAP69A5D8W1 941 aa22.33■■□□□ 1.17
NEDD4L-237ENST00000617539 RECQL5O94762 991 aaPredicted RBP22.33■■□□□ 1.17
NEDD4L-237ENST00000617539 IL4RP24394 825 aa22.33■■□□□ 1.17
NEDD4L-237ENST00000617539 TPM4P67936 248 aa22.33■■□□□ 1.17
NEDD4L-237ENST00000617539 TCEA2Q15560 299 aa22.33■■□□□ 1.17
NEDD4L-237ENST00000617539 CRTC1Q6UUV9 634 aa22.33■■□□□ 1.17
NEDD4L-237ENST00000617539 DPPA4Q7L190 304 aa22.33■■□□□ 1.17
NEDD4L-237ENST00000617539 HID1Q8IV36 788 aa22.33■■□□□ 1.17
NEDD4L-237ENST00000617539 PELI3Q8N2H9 469 aa22.33■■□□□ 1.17
NEDD4L-237ENST00000617539 SPOCK2Q92563 424 aa22.33■■□□□ 1.17
NEDD4L-237ENST00000617539 ABCG4Q9H172 646 aa22.33■■□□□ 1.17
NEDD4L-237ENST00000617539 IFNKQ9P0W0 207 aa22.33■■□□□ 1.17
NEDD4L-237ENST00000617539 A0A1W2PNU3 283 aaPredicted RBP22.32■■□□□ 1.16
NEDD4L-237ENST00000617539 TMEM110-MUSTN1A8MSY1 372 aa22.32■■□□□ 1.16
NEDD4L-237ENST00000617539 A8MX80 341 aa22.32■■□□□ 1.16
NEDD4L-237ENST00000617539 HTRA2O43464 458 aaPredicted RBP22.32■■□□□ 1.16
NEDD4L-237ENST00000617539 MPOP05164 745 aa22.32■■□□□ 1.16
NEDD4L-237ENST00000617539 ANXA6P08133 673 aa22.32■■□□□ 1.16
NEDD4L-237ENST00000617539 CD48P09326 243 aa22.32■■□□□ 1.16
NEDD4L-237ENST00000617539 RENBPP51606 427 aa22.32■■□□□ 1.16
NEDD4L-237ENST00000617539 MTM1Q13496 603 aa22.32■■□□□ 1.16
NEDD4L-237ENST00000617539 TBC1D25Q3MII6 688 aa22.32■■□□□ 1.16
NEDD4L-237ENST00000617539 ENPP7Q6UWV6 458 aa22.32■■□□□ 1.16
NEDD4L-237ENST00000617539 FUBP1Q96AE4 644 aaKnown RBP22.32■■□□□ 1.16
NEDD4L-237ENST00000617539 PDXPQ96GD0 296 aa22.32■■□□□ 1.16
NEDD4L-237ENST00000617539 MGME1Q9BQP7 344 aa22.32■■□□□ 1.16
NEDD4L-237ENST00000617539 NOD2Q9HC29 1040 aa22.32■■□□□ 1.16
NEDD4L-237ENST00000617539 IP6K2Q9UHH9 426 aa22.32■■□□□ 1.16
NEDD4L-237ENST00000617539 PCDHGC4Q9Y5F7 938 aa22.32■■□□□ 1.16
NEDD4L-237ENST00000617539 USP12O75317 370 aa22.31■■□□□ 1.16
NEDD4L-237ENST00000617539 ELFN1P0C7U0 828 aa22.31■■□□□ 1.16
NEDD4L-237ENST00000617539 ABCG1P45844 678 aa22.31■■□□□ 1.16
NEDD4L-237ENST00000617539 SRP54P61011 504 aaKnown RBP22.31■■□□□ 1.16
NEDD4L-237ENST00000617539 MMRN1Q13201 1228 aa22.31■■□□□ 1.16
NEDD4L-237ENST00000617539 ZNF235Q14590 738 aa22.31■■□□□ 1.16
NEDD4L-237ENST00000617539 ISXQ2M1V0 245 aa22.31■■□□□ 1.16
NEDD4L-237ENST00000617539 SOWAHCQ53LP3 525 aaPredicted RBP22.31■■□□□ 1.16
NEDD4L-237ENST00000617539 ALKBH5Q6P6C2 394 aaKnown RBP22.31■■□□□ 1.16
NEDD4L-237ENST00000617539 FSTL5Q8N475 847 aaPredicted RBP22.31■■□□□ 1.16
NEDD4L-237ENST00000617539 PCDH19Q8TAB3 1148 aa22.31■■□□□ 1.16
NEDD4L-237ENST00000617539 FAM71BQ8TC56 605 aa22.31■■□□□ 1.16
NEDD4L-237ENST00000617539 FGF11Q92914 225 aa22.31■■□□□ 1.16
NEDD4L-237ENST00000617539 NUDCD1Q96RS6 583 aa22.31■■□□□ 1.16
NEDD4L-237ENST00000617539 B4GALT6Q9UBX8 382 aa22.31■■□□□ 1.16
NEDD4L-237ENST00000617539 LUC7L2Q9Y383 392 aaKnown RBP22.31■■□□□ 1.16
NEDD4L-237ENST00000617539 KIF26BQ2KJY2 2108 aa22.31■■□□□ 1.16
NEDD4L-237ENST00000617539 ATRXP46100 2492 aa22.31■■□□□ 1.16
NEDD4L-237ENST00000617539 MGAQ8IWI9 3026 aa22.31■■□□□ 1.16
NEDD4L-237ENST00000617539 PTPRQQ9UMZ3 2332 aa22.3■■□□□ 1.16
NEDD4L-237ENST00000617539 TMEM202A6NGA9 273 aa22.3■■□□□ 1.16
NEDD4L-237ENST00000617539 GOLGA6L19H0YKK7 550 aa22.3■■□□□ 1.16
NEDD4L-237ENST00000617539 RASGRP1O95267 797 aa22.3■■□□□ 1.16
NEDD4L-237ENST00000617539 HTR1BP28222 390 aa22.3■■□□□ 1.16
NEDD4L-237ENST00000617539 BLKP51451 505 aa22.3■■□□□ 1.16
NEDD4L-237ENST00000617539 ARSEP51690 589 aa22.3■■□□□ 1.16
NEDD4L-237ENST00000617539 MAXP61244 160 aa22.3■■□□□ 1.16
NEDD4L-237ENST00000617539 POLR2LP62875 67 aaKnown RBP22.3■■□□□ 1.16
NEDD4L-237ENST00000617539 TRAF2Q12933 501 aa22.3■■□□□ 1.16
NEDD4L-237ENST00000617539 NFKBIBQ15653 356 aa22.3■■□□□ 1.16
NEDD4L-237ENST00000617539 ZSCAN23Q3MJ62 389 aa22.3■■□□□ 1.16
NEDD4L-237ENST00000617539 CCDC122Q5T0U0 273 aa22.3■■□□□ 1.16
NEDD4L-237ENST00000617539 RD3Q7Z3Z2 195 aa22.3■■□□□ 1.16
NEDD4L-237ENST00000617539 ATPAF2Q8N5M1 289 aa22.3■■□□□ 1.16
NEDD4L-237ENST00000617539 KYQ8NBH2 561 aa22.3■■□□□ 1.16
NEDD4L-237ENST00000617539 OR1E3Q8WZA6 343 aa22.3■■□□□ 1.16
NEDD4L-237ENST00000617539 IQCDQ96DY2 449 aa22.3■■□□□ 1.16
NEDD4L-237ENST00000617539 WDR92Q96MX6 357 aa22.3■■□□□ 1.16
NEDD4L-237ENST00000617539 BBC3Q96PG8 261 aaPredicted RBP22.3■■□□□ 1.16
NEDD4L-237ENST00000617539 FGF22Q9HCT0 170 aa22.3■■□□□ 1.16
NEDD4L-237ENST00000617539 KLQ9UEF7 1012 aa22.3■■□□□ 1.16
NEDD4L-237ENST00000617539 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.29■■□□□ 1.16
NEDD4L-237ENST00000617539 SOCS5O75159 536 aa22.29■■□□□ 1.16
NEDD4L-237ENST00000617539 CASP14P31944 242 aa22.29■■□□□ 1.16
NEDD4L-237ENST00000617539 HSPA9P38646 679 aaKnown RBP22.29■■□□□ 1.16
NEDD4L-237ENST00000617539 PDX1P52945 283 aa22.29■■□□□ 1.16
NEDD4L-237ENST00000617539 CDH6P55285 790 aa22.29■■□□□ 1.16
NEDD4L-237ENST00000617539 KIAA1024LP59773 190 aa22.29■■□□□ 1.16
NEDD4L-237ENST00000617539 GABREP78334 506 aa22.29■■□□□ 1.16
NEDD4L-237ENST00000617539 PTPRRQ15256 657 aa22.29■■□□□ 1.16
NEDD4L-237ENST00000617539 ELOCQ15369 112 aa22.29■■□□□ 1.16
NEDD4L-237ENST00000617539 ATP13A4Q4VNC1 1196 aa22.29■■□□□ 1.16
NEDD4L-237ENST00000617539 PAF1Q8N7H5 531 aa22.29■■□□□ 1.16
NEDD4L-237ENST00000617539 COQ10AQ96MF6 247 aa22.29■■□□□ 1.16
NEDD4L-237ENST00000617539 RBM15Q96T37 977 aaKnown RBP eCLIP22.29■■□□□ 1.161e-8■■□□□ 11.4
NEDD4L-237ENST00000617539 LGR4Q9BXB1 951 aa22.29■■□□□ 1.16
NEDD4L-237ENST00000617539 XPO4Q9C0E2 1151 aaKnown RBP22.29■■□□□ 1.16
NEDD4L-237ENST00000617539 SIRPGQ9P1W8 387 aa22.29■■□□□ 1.16
NEDD4L-237ENST00000617539 RABGEF1Q9UJ41 708 aa22.29■■□□□ 1.16
NEDD4L-237ENST00000617539 PADI4Q9UM07 663 aa22.29■■□□□ 1.16
NEDD4L-237ENST00000617539 MFSD11O43934 449 aa22.28■■□□□ 1.16
NEDD4L-237ENST00000617539 DXOO77932 396 aaKnown RBP22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms