RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 HECTD3Q5T447 861 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 RBM20Q5T481 1227 aaKnown RBP5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 CNSTQ6PJW8 725 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 PAQR9Q6ZVX9 377 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 ZNF534Q76KX8 674 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 SERINC5Q86VE9 423 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 CFAP52Q8N1V2 620 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 DNAJB14Q8TBM8 379 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 LPGAT1Q92604 370 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 NRBF2Q96F24 287 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 TSGA13Q96PP4 275 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 NPAS2Q99743 824 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 KIFC1Q9BW19 673 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 ADGRE3Q9BY15 652 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 CASS4Q9NQ75 786 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 SF3B1O75533 1304 aaKnown RBP eCLIP5.66□□□□□ -1.56e-6■■■■■ 53.2
SYNCRIP-204ENST00000616122 C15orf38-AP3S2A0A0A6YYH1 394 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 A0A1W2PQH9 124 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 UNCXA6NJT0 531 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 TMEM233B4DJY2 109 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 E9PAM4 449 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 TRIM38O00635 465 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 HOXA2O43364 376 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 PKMP14618 531 aaKnown RBP5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 FMO4P31512 558 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 SLC1A2P43004 574 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 MTTPP55157 894 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 ATP6V0D1P61421 351 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 PURAQ00577 322 aaKnown RBP5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 ROR2Q01974 943 aaKnown RBP5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 ZNF33AQ06730 810 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 ARHGEF7Q14155 803 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 PDK3Q15120 406 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 VARS2Q5ST30 1063 aaKnown RBP5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 RNF219Q5W0B1 726 aaPredicted RBP5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 RINLQ6ZS11 566 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 ARPINQ7Z6K5 226 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 CAMK1DQ8IU85 385 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 PGAM4Q8N0Y7 254 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 FNDC5Q8NAU1 212 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 ADCY4Q8NFM4 1077 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 OR9I1Q8NGQ6 314 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 RMND5BQ96G75 393 aaPredicted RBP5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 CNBD2Q96M20 576 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 ASB2Q96Q27 587 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 HAPLN3Q96S86 360 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 RTKNQ9BST9 563 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 C2orf49Q9BVC5 232 aaPredicted RBP5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.66□□□□□ -1.52e-6■■■■■ 36
SYNCRIP-204ENST00000616122 SPAG4Q9NPE6 437 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 WWOXQ9NZC7 414 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 GMIPQ9P107 970 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 DNAJB4Q9UDY4 337 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 SLC2A6Q9UGQ3 507 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 C9IYK1 514 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 GABRDO14764 452 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 RTN3O95197 1032 aaPredicted RBP5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 TNFAIP8O95379 198 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 IL1BP01584 269 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 LPOP22079 712 aaPredicted RBP5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 GJA5P36382 358 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 GJA9P57773 515 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 PLOD1Q02809 727 aaPredicted RBP5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 BFSP2Q13515 415 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 UBXN11Q5T124 520 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 GPRIN1Q7Z2K8 1008 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 STK32CQ86UX6 486 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 MZB1Q8WU39 189 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 CIB1Q99828 191 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 FAM192AQ9GZU8 254 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 SEMA6AQ9H2E6 1030 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 COL16A1Q07092 1604 aaPredicted RBP5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 LTBP4Q8N2S1 1624 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 OR51F1A6NGY5 319 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 ZBTB14O43829 449 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 CNTN5O94779 1100 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 LDLRP01130 860 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 ALBP02768 609 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 HSPA1AP0DMV8 641 aaKnown RBP5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 HSPA1BP0DMV9 641 aaKnown RBP5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 HAPLN1P10915 354 aaPredicted RBP5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 UQCRBP14927 111 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 IRF9Q00978 393 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 HECTD2Q5U5R9 776 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 KDM1BQ8NB78 822 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 SMG8Q8ND04 991 aaKnown RBP5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 SLC2A13Q96QE2 648 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 UNC93B1Q9H1C4 597 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 NMUR1Q9HB89 426 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 PARVBQ9HBI1 364 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 MIOSQ9NXC5 875 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 C6orf203Q9P0P8 240 aaPredicted RBP5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 EGFL7Q9UHF1 273 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 POLG2Q9UHN1 485 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 hCG_2014768A0A024R1R8 64 aa5.65□□□□□ -1.5
SYNCRIP-204ENST00000616122 RBM47A0AV96 593 aaKnown RBP5.65□□□□□ -1.5
SYNCRIP-204ENST00000616122 IRF1P10914 325 aa5.65□□□□□ -1.5
SYNCRIP-204ENST00000616122 ETS2P15036 469 aa5.65□□□□□ -1.5
SYNCRIP-204ENST00000616122 GSTT1P30711 240 aa5.65□□□□□ -1.5
SYNCRIP-204ENST00000616122 HTR7P34969 479 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms