RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 MZF1P28698 734 aaPredicted RBP19.22■□□□□ 0.67
MMP28-204ENST00000615136 VHLP40337 213 aa19.22■□□□□ 0.67
MMP28-204ENST00000615136 ARF5P84085 180 aa19.22■□□□□ 0.67
MMP28-204ENST00000615136 NAPRTQ6XQN6 538 aa19.22■□□□□ 0.67
MMP28-204ENST00000615136 CHST9Q7L1S5 443 aa19.22■□□□□ 0.67
MMP28-204ENST00000615136 NECAB2Q7Z6G3 386 aa19.22■□□□□ 0.67
MMP28-204ENST00000615136 CENPLQ8N0S6 344 aaPredicted RBP19.22■□□□□ 0.67
MMP28-204ENST00000615136 RDH11Q8TC12 318 aa19.22■□□□□ 0.67
MMP28-204ENST00000615136 BLOC1S5Q8TDH9 187 aa19.22■□□□□ 0.67
MMP28-204ENST00000615136 SREK1Q8WXA9 508 aaKnown RBP19.22■□□□□ 0.67
MMP28-204ENST00000615136 HDAC10Q969S8 669 aa19.22■□□□□ 0.67
MMP28-204ENST00000615136 IFT43Q96FT9 208 aa19.22■□□□□ 0.67
MMP28-204ENST00000615136 FEM1CQ96JP0 617 aa19.22■□□□□ 0.67
MMP28-204ENST00000615136 PSKH2Q96QS6 385 aa19.22■□□□□ 0.67
MMP28-204ENST00000615136 NDNQ99608 321 aa19.22■□□□□ 0.67
MMP28-204ENST00000615136 CDH19Q9H159 772 aa19.22■□□□□ 0.67
MMP28-204ENST00000615136 IL23AQ9NPF7 189 aa19.22■□□□□ 0.67
MMP28-204ENST00000615136 MARCH4Q9P2E8 410 aaPredicted RBP19.22■□□□□ 0.67
MMP28-204ENST00000615136 STOML2Q9UJZ1 356 aa19.22■□□□□ 0.67
MMP28-204ENST00000615136 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.22■□□□□ 0.67
MMP28-204ENST00000615136 TK2O00142 265 aa19.22■□□□□ 0.67
MMP28-204ENST00000615136 TRIM13O60858 407 aa19.22■□□□□ 0.67
MMP28-204ENST00000615136 TBL1XO60907 577 aa19.22■□□□□ 0.67
MMP28-204ENST00000615136 OLFM2O95897 454 aa19.22■□□□□ 0.67
MMP28-204ENST00000615136 CTSAP10619 480 aa19.22■□□□□ 0.67
MMP28-204ENST00000615136 ACADSP16219 412 aa19.22■□□□□ 0.67
MMP28-204ENST00000615136 HDCP19113 662 aa19.22■□□□□ 0.67
MMP28-204ENST00000615136 GABRR2P28476 465 aa19.22■□□□□ 0.67
MMP28-204ENST00000615136 GLRBP48167 497 aa19.22■□□□□ 0.67
MMP28-204ENST00000615136 SCNN1BP51168 640 aa19.22■□□□□ 0.67
MMP28-204ENST00000615136 TAS2R39P59534 338 aa19.22■□□□□ 0.67
MMP28-204ENST00000615136 SLC34A1Q06495 639 aa19.22■□□□□ 0.67
MMP28-204ENST00000615136 DLG1Q12959 904 aa19.22■□□□□ 0.67
MMP28-204ENST00000615136 CCDC6Q16204 474 aa19.22■□□□□ 0.67
MMP28-204ENST00000615136 GPATCH11Q8N954 259 aa19.22■□□□□ 0.67
MMP28-204ENST00000615136 CINPQ9BW66 212 aaPredicted RBP19.22■□□□□ 0.67
MMP28-204ENST00000615136 MUC3BQ9H195 1237 aa19.22■□□□□ 0.67
MMP28-204ENST00000615136 SEPT3Q9UH03 358 aa19.22■□□□□ 0.67
MMP28-204ENST00000615136 EFCAB14O75071 495 aa19.21■□□□□ 0.67
MMP28-204ENST00000615136 TBX10O75333 385 aa19.21■□□□□ 0.67
MMP28-204ENST00000615136 BAIAP3O94812 1187 aa19.21■□□□□ 0.67
MMP28-204ENST00000615136 C1RP00736 705 aa19.21■□□□□ 0.67
MMP28-204ENST00000615136 SERPINF2P08697 491 aa19.21■□□□□ 0.67
MMP28-204ENST00000615136 CR2P20023 1033 aa19.21■□□□□ 0.67
MMP28-204ENST00000615136 DNAJB1P25685 340 aa19.21■□□□□ 0.67
MMP28-204ENST00000615136 PPM1AP35813 382 aa19.21■□□□□ 0.67
MMP28-204ENST00000615136 PPP3CCP48454 512 aa19.21■□□□□ 0.67
MMP28-204ENST00000615136 TSNAXIP1Q2TAA8 658 aa19.21■□□□□ 0.67
MMP28-204ENST00000615136 SETD3Q86TU7 594 aaPredicted RBP19.21■□□□□ 0.67
MMP28-204ENST00000615136 CARNMT1Q8N4J0 409 aa19.21■□□□□ 0.67
MMP28-204ENST00000615136 ZNF781Q8N8C0 355 aa19.21■□□□□ 0.67
MMP28-204ENST00000615136 ELMO2Q96JJ3 720 aa19.21■□□□□ 0.67
MMP28-204ENST00000615136 FAM167BQ9BTA0 163 aa19.21■□□□□ 0.67
MMP28-204ENST00000615136 LRRC3Q9BY71 257 aa19.21■□□□□ 0.67
MMP28-204ENST00000615136 OXSMQ9NWU1 459 aa19.21■□□□□ 0.67
MMP28-204ENST00000615136 NMRK1Q9NWW6 199 aa19.21■□□□□ 0.67
MMP28-204ENST00000615136 SLC7A8Q9UHI5 535 aa19.21■□□□□ 0.67
MMP28-204ENST00000615136 MTF2Q9Y483 593 aaPredicted RBP19.21■□□□□ 0.67
MMP28-204ENST00000615136 DENND4CQ5VZ89 1909 aa19.2■□□□□ 0.66
MMP28-204ENST00000615136 LIN7AO14910 233 aaPredicted RBP19.2■□□□□ 0.66
MMP28-204ENST00000615136 CIB2O75838 187 aa19.2■□□□□ 0.66
MMP28-204ENST00000615136 HSPA4LO95757 839 aa19.2■□□□□ 0.66
MMP28-204ENST00000615136 CD151P48509 253 aa19.2■□□□□ 0.66
MMP28-204ENST00000615136 NAA25Q14CX7 972 aa19.2■□□□□ 0.66
MMP28-204ENST00000615136 UGP2Q16851 508 aa19.2■□□□□ 0.66
MMP28-204ENST00000615136 EPGNQ6UW88 154 aa19.2■□□□□ 0.66
MMP28-204ENST00000615136 ZYG11AQ6WRX3 759 aa19.2■□□□□ 0.66
MMP28-204ENST00000615136 Q6ZNB5 142 aa19.2■□□□□ 0.66
MMP28-204ENST00000615136 TMC8Q8IU68 726 aa19.2■□□□□ 0.66
MMP28-204ENST00000615136 OR13C4Q8NGS5 318 aa19.2■□□□□ 0.66
MMP28-204ENST00000615136 SH3RF2Q8TEC5 729 aa19.2■□□□□ 0.66
MMP28-204ENST00000615136 DNAJC9Q8WXX5 260 aa19.2■□□□□ 0.66
MMP28-204ENST00000615136 DNAJC1Q96KC8 554 aaKnown RBP19.2■□□□□ 0.66
MMP28-204ENST00000615136 TBATAQ96M53 351 aa19.2■□□□□ 0.66
MMP28-204ENST00000615136 OMDQ99983 421 aa19.2■□□□□ 0.66
MMP28-204ENST00000615136 THTPAQ9BU02 230 aa19.2■□□□□ 0.66
MMP28-204ENST00000615136 TASP1Q9H6P5 420 aa19.2■□□□□ 0.66
MMP28-204ENST00000615136 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.2■□□□□ 0.66
MMP28-204ENST00000615136 SPO11Q9Y5K1 396 aa19.2■□□□□ 0.66
MMP28-204ENST00000615136 LCHNA4D1U4 455 aa19.2■□□□□ 0.66
MMP28-204ENST00000615136 GFRA2O00451 464 aa19.2■□□□□ 0.66
MMP28-204ENST00000615136 PAPSS2O95340 614 aaPredicted RBP19.2■□□□□ 0.66
MMP28-204ENST00000615136 PDHA1P08559 390 aa19.2■□□□□ 0.66
MMP28-204ENST00000615136 COPAP53621 1224 aa19.2■□□□□ 0.66
MMP28-204ENST00000615136 RAB10P61026 200 aa19.2■□□□□ 0.66
MMP28-204ENST00000615136 ACTR3P61158 418 aa19.2■□□□□ 0.66
MMP28-204ENST00000615136 HTRA4P83105 476 aaPredicted RBP19.2■□□□□ 0.66
MMP28-204ENST00000615136 MXRA7P84157 204 aa19.2■□□□□ 0.66
MMP28-204ENST00000615136 PTPRRQ15256 657 aa19.2■□□□□ 0.66
MMP28-204ENST00000615136 VWA5B1Q5TIE3 1220 aa19.2■□□□□ 0.66
MMP28-204ENST00000615136 LILRA6Q6PI73 481 aa19.2■□□□□ 0.66
MMP28-204ENST00000615136 RIPOR1Q6ZS17 1223 aa19.2■□□□□ 0.66
MMP28-204ENST00000615136 HERC6Q8IVU3 1022 aa19.2■□□□□ 0.66
MMP28-204ENST00000615136 FIBCD1Q8N539 461 aa19.2■□□□□ 0.66
MMP28-204ENST00000615136 OR6P1Q8NGX9 317 aa19.2■□□□□ 0.66
MMP28-204ENST00000615136 NRG4Q8WWG1 115 aa19.2■□□□□ 0.66
MMP28-204ENST00000615136 CLPTM1LQ96KA5 538 aa19.2■□□□□ 0.66
MMP28-204ENST00000615136 PANX3Q96QZ0 392 aa19.2■□□□□ 0.66
MMP28-204ENST00000615136 OLFM1Q99784 485 aa19.2■□□□□ 0.66
MMP28-204ENST00000615136 RETREG1Q9H6L5 497 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms