RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 PGK1P00558 417 aa10.92□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 ACVR1Q04771 509 aa10.92□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 RALGDSQ12967 914 aa10.92□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 RARS2Q5T160 578 aaKnown RBP10.92□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 OGFOD2Q6N063 350 aa10.92□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 KLC3Q6P597 504 aa10.92□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 C16orf87Q6PH81 154 aa10.92□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 DNAAF3Q8N9W5 541 aa10.92□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 RIN3Q8TB24 985 aa10.92□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 MRGPRX2Q96LB1 330 aa10.92□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 AGAP2Q99490 1192 aa10.92□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 RHOBTB2Q9BYZ6 727 aa10.92□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 NOL6Q9H6R4 1146 aaKnown RBP10.92□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 CACNG4Q9UBN1 327 aa10.92□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 FAM149AA5PLN7 773 aa10.92□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 ZDHHC11BP0C7U3 371 aa10.92□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 HDCP19113 662 aa10.92□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 ARNTP27540 789 aa10.92□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 NMBRP28336 390 aa10.92□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 THOP1P52888 689 aa10.92□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 LIPMQ5VYY2 423 aa10.92□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 PPHLN1Q8NEY8 458 aaKnown RBP10.92□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 RCN3Q96D15 328 aa10.92□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 THAP11Q96EK4 314 aa10.92□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 ZNF419Q96HQ0 510 aaPredicted RBP10.92□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 TMEM209Q96SK2 561 aa10.92□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 NPAS2Q99743 824 aa10.92□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 CIB1Q99828 191 aa10.92□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 TMEM79Q9BSE2 394 aa10.92□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 Q9H521 79 aa10.92□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 AURKCQ9UQB9 309 aa10.92□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 SSX2IPQ9Y2D8 614 aa10.92□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 RAP2CQ9Y3L5 183 aa10.92□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 VWA8A3KMH1 1905 aa10.92□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 TRIM43BA6NCK2 446 aa10.92□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 EFEMP2O95967 443 aa10.92□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 POMCP01189 267 aa10.92□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 MT-ND1P03886 318 aa10.92□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 PAMP19021 973 aa10.92□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 ITGAXP20702 1163 aa10.92□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 FLT3LGP49771 235 aa10.92□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 POU4F1Q01851 419 aa10.92□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 ITGA7Q13683 1181 aa10.92□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 HERC3Q15034 1050 aa10.92□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 KDELC2Q7Z4H8 507 aa10.92□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 PLD6Q8N2A8 252 aaKnown RBP10.92□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 PQLC1Q8N2U9 271 aa10.92□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 SHROOM3Q8TF72 1996 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 COL4A6Q14031 1691 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 MROH6A6NGR9 719 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 MATN2O00339 956 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 FAM58BPP0C7Q3 252 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 SLC35E2BP0CK96 405 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 CKMT2P17540 419 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 GABRB3P28472 473 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 LEPRP48357 1165 aaKnown RBP10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 RXRGP48443 463 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 PLOD1Q02809 727 aaPredicted RBP10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 SLC9B1Q4ZJI4 515 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 CRIPAKQ8N1N5 446 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 SCAMP5Q8TAC9 235 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 ACTRT2Q8TDY3 377 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 ATP6V1E2Q96A05 226 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 CMTM5Q96DZ9 223 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 OR52B2Q96RD2 323 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 CENPFP49454 3210 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 TMEM88BA6NKF7 163 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 ZBBXA8MT70 800 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 EPOP01588 193 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 AHSGP02765 367 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 CTSHP09668 335 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 CKBP12277 381 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 YAP1P46937 504 aaKnown RBP10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 RENBPP51606 427 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 CD300CQ08708 224 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 TRIP4Q15650 581 aaPredicted RBP10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 FSCBQ5H9T9 825 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 MTX3Q5HYI7 312 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 NOMO2Q5JPE7 1267 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 CLLU1OSQ5K130 101 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 IFNEQ86WN2 208 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 CALML6Q8TD86 181 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 MAELQ96JY0 434 aaKnown RBP10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 RPL10LQ96L21 214 aaKnown RBP10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 ZNF599Q96NL3 588 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 PKP2Q99959 881 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 EPS8L2Q9H6S3 715 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 LOC285095A0A1B0GVY8 99 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 ZBTB14O43829 449 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 COX4I1P13073 169 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 HOXB8P17481 243 aaPredicted RBP10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 PSMC3P17980 439 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 EEF1B2P24534 225 aaKnown RBP10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 KPNA2P52292 529 aaKnown RBP10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 MYBPC1Q00872 1141 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 NEDD8Q15843 81 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 C6orf183Q5T699 404 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 UGT2A3Q6UWM9 527 aa10.91□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 GLB1LQ6UWU2 654 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms