RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 SLC7A4O43246 635 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 MAFKO60675 156 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 LEFTY1O75610 366 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 CTSLP07711 333 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 CHN1P15882 459 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 CCNCP24863 283 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 ATP5DP30049 168 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 PLA2G5P39877 138 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 GARSP41250 739 aaKnown RBP8.91□□□□□ -0.98
SMAD4-217ENST00000611848 SLCO1A2P46721 670 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 NR2C2P49116 596 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 CORO7P57737 925 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 RPL6Q02878 288 aaKnown RBP8.91□□□□□ -0.98
SMAD4-217ENST00000611848 NSUN2Q08J23 767 aaKnown RBP eCLIP8.91□□□□□ -0.98
SMAD4-217ENST00000611848 CBLBQ13191 982 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 GRM3Q14832 879 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 SKIDA1Q1XH10 827 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 MYLK3Q32MK0 819 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 TIGD7Q6NT04 549 aaPredicted RBP8.91□□□□□ -0.98
SMAD4-217ENST00000611848 RYBPQ8N488 228 aaPredicted RBP8.91□□□□□ -0.98
SMAD4-217ENST00000611848 HDDC3Q8N4P3 179 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 FAM160A2Q8N612 972 aaPredicted RBP8.91□□□□□ -0.98
SMAD4-217ENST00000611848 PLD5Q8N7P1 536 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 FRMD1Q8N878 549 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 CHST14Q8NCH0 376 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 CADM4Q8NFZ8 388 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 GANCQ8TET4 914 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 FOXJ1Q92949 421 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 PPP1R16AQ96I34 528 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 TSGA13Q96PP4 275 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 CCDC77Q9BR77 488 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 CINPQ9BW66 212 aaPredicted RBP8.91□□□□□ -0.98
SMAD4-217ENST00000611848 OSBPL1AQ9BXW6 950 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 CPEB1Q9BZB8 566 aaKnown RBP8.91□□□□□ -0.98
SMAD4-217ENST00000611848 PCED1AQ9H1Q7 454 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 PPANQ9NQ55 473 aaKnown RBP8.91□□□□□ -0.98
SMAD4-217ENST00000611848 DYRK4Q9NR20 520 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 DTLQ9NZJ0 730 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 SAE1Q9UBE0 346 aaPredicted RBP8.91□□□□□ -0.98
SMAD4-217ENST00000611848 SEPT3Q9UH03 358 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 GMEB2Q9UKD1 530 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 SARDHQ9UL12 918 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 WASF2Q9Y6W5 498 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 ANKRD36A6QL64 1941 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 TRPM6Q9BX84 2022 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 CACNA1EQ15878 2313 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 GVINP1Q7Z2Y8 2422 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 A0A087WUV0 522 aaPredicted RBP8.91□□□□□ -0.98
SMAD4-217ENST00000611848 KPNA3O00505 521 aaPredicted RBP8.91□□□□□ -0.98
SMAD4-217ENST00000611848 CDH16O75309 829 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 RNASEH2AO75792 299 aaKnown RBP8.91□□□□□ -0.98
SMAD4-217ENST00000611848 RETP07949 1114 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 TGM2P21980 687 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 RPL22P35268 128 aaKnown RBP8.91□□□□□ -0.98
SMAD4-217ENST00000611848 DRD3P35462 400 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 DPP6P42658 865 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 MAPK8P45983 427 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 CSNK1DP48730 415 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 DYNLT1P63172 113 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 GBE1Q04446 702 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 ZNF33AQ06730 810 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 SLC10A2Q12908 348 aaPredicted RBP8.91□□□□□ -0.98
SMAD4-217ENST00000611848 HNRNPDQ14103 355 aaKnown RBP8.91□□□□□ -0.98
SMAD4-217ENST00000611848 ZNF235Q14590 738 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 LBRQ14739 615 aaKnown RBP8.91□□□□□ -0.98
SMAD4-217ENST00000611848 NOMO1Q15155 1222 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 LPAL2Q16609 132 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 ARSIQ5FYB1 569 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 MARC1Q5VT66 337 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 TDRPQ86YL5 185 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 RIBC1Q8N443 379 aaPredicted RBP8.91□□□□□ -0.98
SMAD4-217ENST00000611848 AADATQ8N5Z0 425 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 FATE1Q969F0 183 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 FAM131CQ96AQ9 280 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 HDAC11Q96DB2 347 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 ZNF419Q96HQ0 510 aaPredicted RBP8.91□□□□□ -0.98
SMAD4-217ENST00000611848 ZNF317Q96PQ6 595 aaPredicted RBP8.91□□□□□ -0.98
SMAD4-217ENST00000611848 PSKH2Q96QS6 385 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 GPR174Q9BXC1 333 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 BRD8Q9H0E9 1235 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 ZDHHC6Q9H6R6 413 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 LHX3Q9UBR4 397 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 PCDHGA5Q9Y5G8 931 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 ACTL7BQ9Y614 415 aa8.91□□□□□ -0.98
SMAD4-217ENST00000611848 DOCK9Q9BZ29 2069 aa8.9□□□□□ -0.98
SMAD4-217ENST00000611848 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.9□□□□□ -0.99
SMAD4-217ENST00000611848 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.9□□□□□ -0.99
SMAD4-217ENST00000611848 LRRC72A6NJI9 287 aa8.9□□□□□ -0.99
SMAD4-217ENST00000611848 MYO1CO00159 1063 aa8.9□□□□□ -0.99
SMAD4-217ENST00000611848 PPP1R12AO14974 1030 aaPredicted RBP8.9□□□□□ -0.99
SMAD4-217ENST00000611848 MATN3O15232 486 aa8.9□□□□□ -0.99
SMAD4-217ENST00000611848 LRP3O75074 770 aa8.9□□□□□ -0.99
SMAD4-217ENST00000611848 EPN2O95208 641 aa8.9□□□□□ -0.99
SMAD4-217ENST00000611848 SEMA4FO95754 770 aa8.9□□□□□ -0.99
SMAD4-217ENST00000611848 PEX11BO96011 259 aa8.9□□□□□ -0.99
SMAD4-217ENST00000611848 DRD4P21917 467 aa8.9□□□□□ -0.99
SMAD4-217ENST00000611848 ITGB7P26010 798 aa8.9□□□□□ -0.99
SMAD4-217ENST00000611848 STIP1P31948 543 aaKnown RBP8.9□□□□□ -0.99
SMAD4-217ENST00000611848 ACSL1P33121 698 aa8.9□□□□□ -0.99
SMAD4-217ENST00000611848 DHPSP49366 369 aaPredicted RBP8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms