RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 PM20D1Q6GTS8 502 aa16.07■□□□□ 0.16
RTN1-209ENST00000611068 LILRB4Q8NHJ6 448 aa16.07■□□□□ 0.16
RTN1-209ENST00000611068 LRGUKQ96M69 825 aa16.07■□□□□ 0.16
RTN1-209ENST00000611068 CCDC138Q96M89 665 aa16.07■□□□□ 0.16
RTN1-209ENST00000611068 SLC39A3Q9BRY0 314 aa16.07■□□□□ 0.16
RTN1-209ENST00000611068 WWP1Q9H0M0 922 aa16.07■□□□□ 0.16
RTN1-209ENST00000611068 RAB6BQ9NRW1 208 aa16.07■□□□□ 0.16
RTN1-209ENST00000611068 C6orf203Q9P0P8 240 aaPredicted RBP16.07■□□□□ 0.16
RTN1-209ENST00000611068 GMIPQ9P107 970 aa16.07■□□□□ 0.16
RTN1-209ENST00000611068 PCDHB5Q9Y5E4 795 aa16.07■□□□□ 0.16
RTN1-209ENST00000611068 ZMPSTE24O75844 475 aa16.07■□□□□ 0.16
RTN1-209ENST00000611068 TMEM63AO94886 807 aa16.07■□□□□ 0.16
RTN1-209ENST00000611068 CXCL10P02778 98 aa16.07■□□□□ 0.16
RTN1-209ENST00000611068 GPX6P59796 221 aa16.07■□□□□ 0.16
RTN1-209ENST00000611068 CENPUQ71F23 418 aa16.07■□□□□ 0.16
RTN1-209ENST00000611068 SETD3Q86TU7 594 aaPredicted RBP16.07■□□□□ 0.16
RTN1-209ENST00000611068 CHSY1Q86X52 802 aa16.07■□□□□ 0.16
RTN1-209ENST00000611068 MIB1Q86YT6 1006 aa16.07■□□□□ 0.16
RTN1-209ENST00000611068 CHERPQ8IWX8 916 aaKnown RBP16.07■□□□□ 0.16
RTN1-209ENST00000611068 CELF6Q96J87 481 aaKnown RBP16.07■□□□□ 0.16
RTN1-209ENST00000611068 TRIM56Q9BRZ2 755 aaKnown RBP16.07■□□□□ 0.16
RTN1-209ENST00000611068 VN1R3Q9BXE9 311 aa16.07■□□□□ 0.16
RTN1-209ENST00000611068 AASDHPPTQ9NRN7 309 aa16.07■□□□□ 0.16
RTN1-209ENST00000611068 OR12D3Q9UGF7 316 aa16.07■□□□□ 0.16
RTN1-209ENST00000611068 SLC24A2Q9UI40 661 aa16.07■□□□□ 0.16
RTN1-209ENST00000611068 FBXW11Q9UKB1 542 aa16.07■□□□□ 0.16
RTN1-209ENST00000611068 PCDHGA8Q9Y5G5 932 aa16.07■□□□□ 0.16
RTN1-209ENST00000611068 USP3Q9Y6I4 520 aa16.07■□□□□ 0.16
RTN1-209ENST00000611068 TTC34A8MYJ7 566 aa16.06■□□□□ 0.16
RTN1-209ENST00000611068 CFAP99D6REC4 459 aa16.06■□□□□ 0.16
RTN1-209ENST00000611068 H6PDO95479 791 aa16.06■□□□□ 0.16
RTN1-209ENST00000611068 KRT75O95678 551 aa16.06■□□□□ 0.16
RTN1-209ENST00000611068 ESRRBO95718 433 aa16.06■□□□□ 0.16
RTN1-209ENST00000611068 SELENBP1Q13228 472 aa16.06■□□□□ 0.16
RTN1-209ENST00000611068 KIAA1841Q6NSI8 718 aa16.06■□□□□ 0.16
RTN1-209ENST00000611068 LYSMD3Q7Z3D4 306 aa16.06■□□□□ 0.16
RTN1-209ENST00000611068 GPR141Q7Z602 305 aa16.06■□□□□ 0.16
RTN1-209ENST00000611068 MMAAQ8IVH4 418 aaKnown RBP16.06■□□□□ 0.16
RTN1-209ENST00000611068 CAPSLQ8WWF8 208 aa16.06■□□□□ 0.16
RTN1-209ENST00000611068 TTPALQ9BTX7 342 aa16.06■□□□□ 0.16
RTN1-209ENST00000611068 RPF2Q9H7B2 306 aaKnown RBP16.06■□□□□ 0.16
RTN1-209ENST00000611068 EPS15L1Q9UBC2 864 aa16.06■□□□□ 0.16
RTN1-209ENST00000611068 RIMS3Q9UJD0 308 aa16.06■□□□□ 0.16
RTN1-209ENST00000611068 C5orf42Q9H799 3197 aa16.06■□□□□ 0.16
RTN1-209ENST00000611068 TMEM189-UBE2V1I3L0A0 370 aa16.06■□□□□ 0.16
RTN1-209ENST00000611068 RSL1D1O76021 490 aaKnown RBP16.06■□□□□ 0.16
RTN1-209ENST00000611068 VNN2O95498 520 aa16.06■□□□□ 0.16
RTN1-209ENST00000611068 COL6A1P12109 1028 aa16.06■□□□□ 0.16
RTN1-209ENST00000611068 FGFR3P22607 806 aa16.06■□□□□ 0.16
RTN1-209ENST00000611068 SSTR1P30872 391 aa16.06■□□□□ 0.16
RTN1-209ENST00000611068 OR1D2P34982 312 aa16.06■□□□□ 0.16
RTN1-209ENST00000611068 MRPS22P82650 360 aaKnown RBP16.06■□□□□ 0.16
RTN1-209ENST00000611068 BST1Q10588 318 aa16.06■□□□□ 0.16
RTN1-209ENST00000611068 ADGRE1Q14246 886 aa16.06■□□□□ 0.16
RTN1-209ENST00000611068 SMAD1Q15797 465 aaKnown RBP16.06■□□□□ 0.16
RTN1-209ENST00000611068 FXNQ16595 210 aa16.06■□□□□ 0.16
RTN1-209ENST00000611068 AARS2Q5JTZ9 985 aaKnown RBP16.06■□□□□ 0.16
RTN1-209ENST00000611068 GOLM1Q8NBJ4 401 aa16.06■□□□□ 0.16
RTN1-209ENST00000611068 TTC16Q8NEE8 873 aa16.06■□□□□ 0.16
RTN1-209ENST00000611068 PPP1R14CQ8TAE6 165 aa16.06■□□□□ 0.16
RTN1-209ENST00000611068 FAF2Q96CS3 445 aa16.06■□□□□ 0.16
RTN1-209ENST00000611068 PAFAH2Q99487 392 aa16.06■□□□□ 0.16
RTN1-209ENST00000611068 RNF38Q9H0F5 515 aa16.06■□□□□ 0.16
RTN1-209ENST00000611068 C11orf49Q9H6J7 331 aa16.06■□□□□ 0.16
RTN1-209ENST00000611068 PALMDQ9NP74 551 aa16.06■□□□□ 0.16
RTN1-209ENST00000611068 IFT52Q9Y366 437 aa16.06■□□□□ 0.16
RTN1-209ENST00000611068 MYO18AQ92614 2054 aaKnown RBP16.05■□□□□ 0.16
RTN1-209ENST00000611068 ARHGEF37A1IGU5 675 aa16.05■□□□□ 0.16
RTN1-209ENST00000611068 H3BMQ9 156 aa16.05■□□□□ 0.16
RTN1-209ENST00000611068 KCNK1O00180 336 aa16.05■□□□□ 0.16
RTN1-209ENST00000611068 SYN3O14994 580 aa16.05■□□□□ 0.16
RTN1-209ENST00000611068 ERCC2P18074 760 aa16.05■□□□□ 0.16
RTN1-209ENST00000611068 AOC1P19801 751 aa16.05■□□□□ 0.16
RTN1-209ENST00000611068 TPI1P60174 286 aa16.05■□□□□ 0.16
RTN1-209ENST00000611068 NRF1Q16656 503 aa16.05■□□□□ 0.16
RTN1-209ENST00000611068 BBS9Q3SYG4 887 aa16.05■□□□□ 0.16
RTN1-209ENST00000611068 GRAMD2AQ8IUY3 354 aa16.05■□□□□ 0.16
RTN1-209ENST00000611068 SPERTQ8NA61 448 aa16.05■□□□□ 0.16
RTN1-209ENST00000611068 SERAC1Q96JX3 654 aa16.05■□□□□ 0.16
RTN1-209ENST00000611068 COG8Q96MW5 612 aa16.05■□□□□ 0.16
RTN1-209ENST00000611068 C20orf27Q9GZN8 174 aa16.05■□□□□ 0.16
RTN1-209ENST00000611068 NAA50Q9GZZ1 169 aaKnown RBP16.05■□□□□ 0.16
RTN1-209ENST00000611068 MKS1Q9NXB0 559 aa16.05■□□□□ 0.16
RTN1-209ENST00000611068 DAPK2Q9UIK4 370 aa16.05■□□□□ 0.16
RTN1-209ENST00000611068 PCDHGA11Q9Y5H2 935 aa16.05■□□□□ 0.16
RTN1-209ENST00000611068 NUP205Q92621 2012 aa16.05■□□□□ 0.16
RTN1-209ENST00000611068 PDE4DIPQ5VU43 2346 aa16.05■□□□□ 0.16
RTN1-209ENST00000611068 MTMR11A4FU01 709 aa16.05■□□□□ 0.16
RTN1-209ENST00000611068 H3BNH8 94 aa16.05■□□□□ 0.16
RTN1-209ENST00000611068 MYO1DO94832 1006 aa16.05■□□□□ 0.16
RTN1-209ENST00000611068 APRTP07741 180 aa16.05■□□□□ 0.16
RTN1-209ENST00000611068 SERPINA6P08185 405 aa16.05■□□□□ 0.16
RTN1-209ENST00000611068 TGM2P21980 687 aa16.05■□□□□ 0.16
RTN1-209ENST00000611068 PRKACBP22694 351 aa16.05■□□□□ 0.16
RTN1-209ENST00000611068 ADSLP30566 484 aaPredicted RBP16.05■□□□□ 0.16
RTN1-209ENST00000611068 EFEMP1Q12805 493 aa16.05■□□□□ 0.16
RTN1-209ENST00000611068 FBXO46Q6PJ61 603 aaPredicted RBP16.05■□□□□ 0.16
RTN1-209ENST00000611068 BNIPLQ7Z465 357 aa16.05■□□□□ 0.16
RTN1-209ENST00000611068 IGFN1Q86VF2 1251 aa16.05■□□□□ 0.16
RTN1-209ENST00000611068 ELMOD1Q8N336 334 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms