RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 TRMOQ9BU70 441 aa14.3□□□□□ -0.12
PCDHB16-201ENST00000609684 HMGXB4Q9UGU5 601 aa14.3□□□□□ -0.12
PCDHB16-201ENST00000609684 ZNF180Q9UJW8 692 aa14.3□□□□□ -0.12
PCDHB16-201ENST00000609684 CCDC159P0C7I6 412 aa14.3□□□□□ -0.12
PCDHB16-201ENST00000609684 PABPC1P11940 636 aaKnown RBP14.3□□□□□ -0.12
PCDHB16-201ENST00000609684 GABRR2P28476 465 aa14.3□□□□□ -0.12
PCDHB16-201ENST00000609684 PPIDQ08752 370 aaKnown RBP14.3□□□□□ -0.12
PCDHB16-201ENST00000609684 PHKG1Q16816 387 aa14.3□□□□□ -0.12
PCDHB16-201ENST00000609684 NXNL1Q96CM4 212 aa14.3□□□□□ -0.12
PCDHB16-201ENST00000609684 C7orf26Q96N11 449 aa14.3□□□□□ -0.12
PCDHB16-201ENST00000609684 COPS8Q99627 209 aa14.3□□□□□ -0.12
PCDHB16-201ENST00000609684 NDEL1Q9GZM8 345 aa14.3□□□□□ -0.12
PCDHB16-201ENST00000609684 PLK2Q9NYY3 685 aa14.3□□□□□ -0.12
PCDHB16-201ENST00000609684 MRPS23Q9Y3D9 190 aaKnown RBP14.3□□□□□ -0.12
PCDHB16-201ENST00000609684 ARL5CA6NH57 179 aa14.3□□□□□ -0.12
PCDHB16-201ENST00000609684 KPNA5O15131 536 aa14.3□□□□□ -0.12
PCDHB16-201ENST00000609684 MAGEC1O60732 1142 aa14.3□□□□□ -0.12
PCDHB16-201ENST00000609684 RHOQP17081 205 aa14.3□□□□□ -0.12
PCDHB16-201ENST00000609684 L1CAMP32004 1257 aa14.3□□□□□ -0.12
PCDHB16-201ENST00000609684 CRATP43155 626 aa14.3□□□□□ -0.12
PCDHB16-201ENST00000609684 SLC7A2P52569 658 aa14.3□□□□□ -0.12
PCDHB16-201ENST00000609684 RABGGTBP53611 331 aa14.3□□□□□ -0.12
PCDHB16-201ENST00000609684 GRM3Q14832 879 aa14.3□□□□□ -0.12
PCDHB16-201ENST00000609684 KCNA10Q16322 511 aa14.3□□□□□ -0.12
PCDHB16-201ENST00000609684 CA9Q16790 459 aa14.3□□□□□ -0.12
PCDHB16-201ENST00000609684 PARP15Q460N3 678 aa14.3□□□□□ -0.12
PCDHB16-201ENST00000609684 SPRYD7Q5W111 196 aa14.3□□□□□ -0.12
PCDHB16-201ENST00000609684 METTL3Q86U44 580 aaKnown RBP14.3□□□□□ -0.12
PCDHB16-201ENST00000609684 RBFAQ8N0V3 343 aa14.3□□□□□ -0.12
PCDHB16-201ENST00000609684 RSPH1Q8WYR4 309 aa14.3□□□□□ -0.12
PCDHB16-201ENST00000609684 MIEF2Q96C03 454 aa14.3□□□□□ -0.12
PCDHB16-201ENST00000609684 NPAS2Q99743 824 aa14.3□□□□□ -0.12
PCDHB16-201ENST00000609684 ACBD6Q9BR61 282 aa14.3□□□□□ -0.12
PCDHB16-201ENST00000609684 RAD18Q9NS91 495 aa14.3□□□□□ -0.12
PCDHB16-201ENST00000609684 PRPF19Q9UMS4 504 aaKnown RBP14.3□□□□□ -0.12
PCDHB16-201ENST00000609684 SNX10Q9Y5X0 201 aa14.3□□□□□ -0.12
PCDHB16-201ENST00000609684 GSC2O15499 205 aa14.3□□□□□ -0.12
PCDHB16-201ENST00000609684 DYRK3O43781 588 aa14.3□□□□□ -0.12
PCDHB16-201ENST00000609684 KLF10Q13118 480 aa14.3□□□□□ -0.12
PCDHB16-201ENST00000609684 NAIF1Q69YI7 327 aaPredicted RBP14.3□□□□□ -0.12
PCDHB16-201ENST00000609684 RAET1GQ6H3X3 334 aa14.3□□□□□ -0.12
PCDHB16-201ENST00000609684 AMIGO2Q86SJ2 522 aa14.3□□□□□ -0.12
PCDHB16-201ENST00000609684 CLEC4CQ8WTT0 213 aa14.3□□□□□ -0.12
PCDHB16-201ENST00000609684 ATXN2Q99700 1313 aaKnown RBP14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 SERPINI2O75830 405 aa14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 CCNCP24863 283 aa14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 MSX2P35548 267 aaPredicted RBP14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 GPD2P43304 727 aa14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 RXRGP48443 463 aa14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 LIMK2P53671 638 aa14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 DAOAP59103 153 aa14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 DSC2Q02487 901 aa14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 BNIP1Q12981 228 aa14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 PDK3Q15120 406 aa14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 NOL9Q5SY16 702 aaKnown RBP14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 DCAF12L1Q5VU92 463 aa14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 DLK2Q6UY11 383 aa14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 ZNF438Q7Z4V0 828 aa14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 TDRPQ86YL5 185 aa14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 PROX1Q92786 737 aa14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 PALMDQ9NP74 551 aa14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 RPP40O75818 363 aaKnown RBP14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 PIGRP01833 764 aa14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 SPATA31D3P0C874 917 aa14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 ZBTB48P10074 688 aaPredicted RBP14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 IDO1P14902 403 aa14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 CTNNB1P35222 781 aa14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 GPR1P46091 355 aa14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 MPP1Q00013 466 aa14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 ZIK1Q3SY52 487 aaPredicted RBP14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 SLC44A4Q53GD3 710 aa14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 LYPLAL1Q5VWZ2 237 aa14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 RFWD3Q6PCD5 774 aa14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 SPATA31D4Q6ZUB0 917 aa14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 C8orf59Q8N0T1 100 aaPredicted RBP14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 FIBCD1Q8N539 461 aa14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 CXorf40AQ8TE69 158 aa14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 MTERF3Q96E29 417 aa14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 LPIN3Q9BQK8 851 aa14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 A8MUI8 341 aa14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 COL6A2P12110 1019 aa14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 SP2Q02086 613 aa14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 CREMQ03060 361 aa14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 SMARCB1Q12824 385 aa14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 TIGD2Q4W5G0 525 aa14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 ARHGAP17Q68EM7 881 aa14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 SERPINA13PQ6UXR4 307 aa14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 LDB1Q86U70 411 aaPredicted RBP14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 CYP4Z2PQ8N1L4 340 aa14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 MYO19Q96H55 970 aa14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 RAD21L1Q9H4I0 556 aa14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 PRKAG3Q9UGI9 489 aa14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 ENOPH1Q9UHY7 261 aa14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 NFKBIEO00221 500 aa14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 IPO13O94829 963 aaKnown RBP14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 C1RP00736 705 aa14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 DLG2Q15700 870 aa14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 ZNF549Q6P9A3 640 aa14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 SPESP1Q6UW49 350 aa14.29□□□□□ -0.12
PCDHB16-201ENST00000609684 MAB21L3Q8N8X9 362 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms