RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 MAXP61244 160 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 BTG3Q14201 252 aaPredicted RBP13.13□□□□□ -0.31
USP6NL-205ENST00000609104 RGL4Q8IZJ4 473 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 NOL11Q9H8H0 719 aaKnown RBP13.13□□□□□ -0.31
USP6NL-205ENST00000609104 PRDM8Q9NQV8 689 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 DNMT3LQ9UJW3 386 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 ADAM28Q9UKQ2 775 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 DMTF1Q9Y222 760 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 PCDHGC5Q9Y5F6 944 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 GOT1P17174 413 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 DRD4P21917 467 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 C12orf56Q8IXR9 622 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 BAP1Q92560 729 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 RAP2CQ9Y3L5 183 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 LRIG2O94898 1065 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 ATP13A4Q4VNC1 1196 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 PDCD2LQ9BRP1 358 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 RASSF1Q9NS23 344 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 COMMD3-BMI1R4GMX3 469 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 NOS1APO75052 506 aaPredicted RBP13.12□□□□□ -0.31
USP6NL-205ENST00000609104 UGT1A5P35504 534 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 BNIP2Q12982 314 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 C5orf22Q49AR2 442 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 PHF12Q96QT6 1004 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 PPP2R3BQ9Y5P8 575 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 AXLP30530 894 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 RPL5P46777 297 aaKnown RBP13.12□□□□□ -0.31
USP6NL-205ENST00000609104 TUFMP49411 452 aaKnown RBP13.12□□□□□ -0.31
USP6NL-205ENST00000609104 PPP2R2BQ00005 443 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 POU5F1Q01860 360 aaKnown RBP13.12□□□□□ -0.31
USP6NL-205ENST00000609104 CPSF6Q16630 551 aaKnown RBP eCLIP13.12□□□□□ -0.31
USP6NL-205ENST00000609104 CCSAPQ6IQ19 270 aaPredicted RBP13.12□□□□□ -0.31
USP6NL-205ENST00000609104 FAM98AQ8NCA5 519 aaKnown RBP13.12□□□□□ -0.31
USP6NL-205ENST00000609104 LINGO1Q96FE5 620 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 RAB27AP51159 221 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 CEBPGP53567 150 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 RIPK1Q13546 671 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 CBFBQ13951 182 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 MEA1Q16626 185 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 NEK6Q9HC98 313 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 DHRS7Q9Y394 339 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 MCIDASD6RGH6 385 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 AVILO75366 819 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 RLN1P04808 185 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 ITGA2BP08514 1039 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 CTPS1P17812 591 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 MANFP55145 182 aaKnown RBP13.12□□□□□ -0.31
USP6NL-205ENST00000609104 FSCN1Q16658 493 aaKnown RBP13.12□□□□□ -0.31
USP6NL-205ENST00000609104 WSCD1Q658N2 575 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 ZPBP2Q6X784 338 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 TP53INP1Q96A56 240 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 ZNF607Q96SK3 696 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 PNPOQ9NVS9 261 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 ARCQ7LC44 396 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.12□□□□□ -0.31
USP6NL-205ENST00000609104 ATP13A3Q9H7F0 1226 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 TMEM39AQ9NV64 488 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.12□□□□□ -0.31
USP6NL-205ENST00000609104 GRIN3BO60391 1043 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 RPL9P32969 192 aaKnown RBP13.12□□□□□ -0.31
USP6NL-205ENST00000609104 RAB2AP61019 212 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 MBTD1Q05BQ5 628 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 INTS5Q6P9B9 1019 aaKnown RBP13.12□□□□□ -0.31
USP6NL-205ENST00000609104 TRIM40Q6P9F5 258 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 SKA1Q96BD8 255 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 C1GALT1C1Q96EU7 318 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 PPP1R16AQ96I34 528 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 ZNF446Q9NWS9 450 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 GIT1Q9Y2X7 761 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 ADGRB3O60242 1522 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 MAGEB3O15480 346 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 RBMXL2O75526 392 aaKnown RBP13.12□□□□□ -0.31
USP6NL-205ENST00000609104 ADORA2AP29274 412 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 MCFD2Q8NI22 146 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 KBTBD7Q8WVZ9 684 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 RNF157Q96PX1 679 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 TCF12Q99081 682 aa13.12□□□□□ -0.31
USP6NL-205ENST00000609104 ACE2Q9BYF1 805 aaPredicted RBP13.12□□□□□ -0.31
USP6NL-205ENST00000609104 PPP3CAQ08209 521 aa13.11□□□□□ -0.31
USP6NL-205ENST00000609104 OAFQ86UD1 273 aa13.11□□□□□ -0.31
USP6NL-205ENST00000609104 ZNF410Q86VK4 478 aa13.11□□□□□ -0.31
USP6NL-205ENST00000609104 SNRNP25Q9BV90 132 aaKnown RBP13.11□□□□□ -0.31
USP6NL-205ENST00000609104 ZYG11BQ9C0D3 744 aa13.11□□□□□ -0.31
USP6NL-205ENST00000609104 CITO14578 2027 aa13.11□□□□□ -0.31
USP6NL-205ENST00000609104 MAGEC1O60732 1142 aa13.11□□□□□ -0.31
USP6NL-205ENST00000609104 ADGRG2Q8IZP9 1017 aa13.11□□□□□ -0.31
USP6NL-205ENST00000609104 A0A0X1KG70 313 aa13.11□□□□□ -0.31
USP6NL-205ENST00000609104 FTH1P02794 183 aa13.11□□□□□ -0.31
USP6NL-205ENST00000609104 ACADLP28330 430 aa13.11□□□□□ -0.31
USP6NL-205ENST00000609104 RPL3P39023 403 aaKnown RBP13.11□□□□□ -0.31
USP6NL-205ENST00000609104 C6orf52Q5T4I8 152 aa13.11□□□□□ -0.31
USP6NL-205ENST00000609104 RAPGEFL1Q9UHV5 662 aa13.11□□□□□ -0.31
USP6NL-205ENST00000609104 CNOT6Q9ULM6 557 aaKnown RBP13.11□□□□□ -0.31
USP6NL-205ENST00000609104 NFASCO94856 1347 aa13.11□□□□□ -0.31
USP6NL-205ENST00000609104 PTPRNQ16849 979 aa13.11□□□□□ -0.31
USP6NL-205ENST00000609104 PDHXO00330 501 aa13.11□□□□□ -0.31
USP6NL-205ENST00000609104 LSM1O15116 133 aaKnown RBP13.11□□□□□ -0.31
USP6NL-205ENST00000609104 CBFA2T3O75081 653 aa13.11□□□□□ -0.31
USP6NL-205ENST00000609104 MTTPP55157 894 aa13.11□□□□□ -0.31
USP6NL-205ENST00000609104 CRELD2Q6UXH1 353 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms