RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 TRIM59Q8IWR1 403 aa11.84□□□□□ -0.51
PDLIM1P1-201ENST00000604187 NRSN1Q8IZ57 195 aa11.84□□□□□ -0.51
PDLIM1P1-201ENST00000604187 FUBP1Q96AE4 644 aaKnown RBP11.84□□□□□ -0.51
PDLIM1P1-201ENST00000604187 HMCESQ96FZ2 354 aa11.84□□□□□ -0.51
PDLIM1P1-201ENST00000604187 GSDMAQ96QA5 445 aa11.84□□□□□ -0.51
PDLIM1P1-201ENST00000604187 HAPLN3Q96S86 360 aa11.84□□□□□ -0.51
PDLIM1P1-201ENST00000604187 TTYH3Q9C0H2 523 aa11.84□□□□□ -0.51
PDLIM1P1-201ENST00000604187 CYP4F12Q9HCS2 524 aa11.84□□□□□ -0.51
PDLIM1P1-201ENST00000604187 PCDH12Q9NPG4 1184 aa11.84□□□□□ -0.51
PDLIM1P1-201ENST00000604187 PLCB1Q9NQ66 1216 aa11.84□□□□□ -0.51
PDLIM1P1-201ENST00000604187 DNAI1Q9UI46 699 aa11.84□□□□□ -0.51
PDLIM1P1-201ENST00000604187 PILRAQ9UKJ1 303 aa11.84□□□□□ -0.51
PDLIM1P1-201ENST00000604187 HPCAL4Q9UM19 191 aa11.84□□□□□ -0.51
PDLIM1P1-201ENST00000604187 PCDHGC3Q9UN70 934 aa11.84□□□□□ -0.51
PDLIM1P1-201ENST00000604187 FBN2P35556 2912 aa11.84□□□□□ -0.51
PDLIM1P1-201ENST00000604187 CSMD1Q96PZ7 3565 aa11.84□□□□□ -0.51
PDLIM1P1-201ENST00000604187 CELSR2Q9HCU4 2923 aa11.83□□□□□ -0.52
PDLIM1P1-201ENST00000604187 A1L4Q6 167 aa11.83□□□□□ -0.52
PDLIM1P1-201ENST00000604187 EFCAB7A8K855 629 aa11.83□□□□□ -0.52
PDLIM1P1-201ENST00000604187 INSIG1O15503 277 aa11.83□□□□□ -0.52
PDLIM1P1-201ENST00000604187 ZW10O43264 779 aa11.83□□□□□ -0.52
PDLIM1P1-201ENST00000604187 BUB1O43683 1085 aa11.83□□□□□ -0.52
PDLIM1P1-201ENST00000604187 RAMP2O60895 175 aa11.83□□□□□ -0.52
PDLIM1P1-201ENST00000604187 VPS4BO75351 444 aa11.83□□□□□ -0.52
PDLIM1P1-201ENST00000604187 SMC2O95347 1197 aa11.83□□□□□ -0.52
PDLIM1P1-201ENST00000604187 PIGNO95427 931 aa11.83□□□□□ -0.52
PDLIM1P1-201ENST00000604187 PRKCGP05129 697 aa11.83□□□□□ -0.52
PDLIM1P1-201ENST00000604187 RNF224P0DH78 156 aa11.83□□□□□ -0.52
PDLIM1P1-201ENST00000604187 KELP23276 732 aa11.83□□□□□ -0.52
PDLIM1P1-201ENST00000604187 CSF2RBP32927 897 aa11.83□□□□□ -0.52
PDLIM1P1-201ENST00000604187 FLT3P36888 993 aa11.83□□□□□ -0.52
PDLIM1P1-201ENST00000604187 MMP12P39900 470 aa11.83□□□□□ -0.52
PDLIM1P1-201ENST00000604187 MAPKAPK2P49137 400 aa11.83□□□□□ -0.52
PDLIM1P1-201ENST00000604187 SUOXP51687 545 aa11.83□□□□□ -0.52
PDLIM1P1-201ENST00000604187 RHOAP61586 193 aa11.83□□□□□ -0.52
PDLIM1P1-201ENST00000604187 APBA1Q02410 837 aa11.83□□□□□ -0.52
PDLIM1P1-201ENST00000604187 BIRC2Q13490 618 aa11.83□□□□□ -0.52
PDLIM1P1-201ENST00000604187 STIM1Q13586 685 aa11.83□□□□□ -0.52
PDLIM1P1-201ENST00000604187 TRA2AQ13595 282 aaKnown RBP eCLIP11.83□□□□□ -0.52
PDLIM1P1-201ENST00000604187 DCAF12Q5T6F0 453 aa11.83□□□□□ -0.52
PDLIM1P1-201ENST00000604187 FAM102AQ5T9C2 384 aaPredicted RBP11.83□□□□□ -0.52
PDLIM1P1-201ENST00000604187 FHL5Q5TD97 284 aa11.83□□□□□ -0.52
PDLIM1P1-201ENST00000604187 ERAP2Q6P179 960 aa11.83□□□□□ -0.52
PDLIM1P1-201ENST00000604187 ZNF354CQ86Y25 554 aa11.83□□□□□ -0.52
PDLIM1P1-201ENST00000604187 NLGN4XQ8N0W4 816 aa11.83□□□□□ -0.52
PDLIM1P1-201ENST00000604187 EFCAB3Q8N7B9 438 aa11.83□□□□□ -0.52
PDLIM1P1-201ENST00000604187 TEX19Q8NA77 164 aa11.83□□□□□ -0.52
PDLIM1P1-201ENST00000604187 NLGN4YQ8NFZ3 816 aaPredicted RBP11.83□□□□□ -0.52
PDLIM1P1-201ENST00000604187 SSC4DQ8WTU2 575 aa11.83□□□□□ -0.52
PDLIM1P1-201ENST00000604187 ZDHHC1Q8WTX9 485 aa11.83□□□□□ -0.52
PDLIM1P1-201ENST00000604187 STARD8Q92502 1023 aa11.83□□□□□ -0.52
PDLIM1P1-201ENST00000604187 NCAPGQ9BPX3 1015 aa11.83□□□□□ -0.52
PDLIM1P1-201ENST00000604187 CRACR2AQ9BSW2 395 aa11.83□□□□□ -0.52
PDLIM1P1-201ENST00000604187 ZMYND15Q9H091 742 aa11.83□□□□□ -0.52
PDLIM1P1-201ENST00000604187 SUDS3Q9H7L9 328 aaPredicted RBP11.83□□□□□ -0.52
PDLIM1P1-201ENST00000604187 SPATS2LQ9NUQ6 558 aaKnown RBP11.83□□□□□ -0.52
PDLIM1P1-201ENST00000604187 OCIAD1Q9NX40 245 aa11.83□□□□□ -0.52
PDLIM1P1-201ENST00000604187 TMEM9Q9P0T7 183 aa11.83□□□□□ -0.52
PDLIM1P1-201ENST00000604187 MOSPD1Q9UJG1 213 aa11.83□□□□□ -0.52
PDLIM1P1-201ENST00000604187 VPS4AQ9UN37 437 aa11.83□□□□□ -0.52
PDLIM1P1-201ENST00000604187 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.83□□□□□ -0.52
PDLIM1P1-201ENST00000604187 ZFC3H1O60293 1989 aaKnown RBP11.83□□□□□ -0.52
PDLIM1P1-201ENST00000604187 LOC101059948A0A1B0GTJ6 334 aa11.82□□□□□ -0.52
PDLIM1P1-201ENST00000604187 B4E171 279 aa11.82□□□□□ -0.52
PDLIM1P1-201ENST00000604187 K7EM74 188 aa11.82□□□□□ -0.52
PDLIM1P1-201ENST00000604187 THRAP10827 490 aa11.82□□□□□ -0.52
PDLIM1P1-201ENST00000604187 RHOQP17081 205 aa11.82□□□□□ -0.52
PDLIM1P1-201ENST00000604187 KRT9P35527 623 aa11.82□□□□□ -0.52
PDLIM1P1-201ENST00000604187 TSPAN7P41732 249 aa11.82□□□□□ -0.52
PDLIM1P1-201ENST00000604187 RAB15P59190 212 aa11.82□□□□□ -0.52
PDLIM1P1-201ENST00000604187 NR1D2Q14995 579 aa11.82□□□□□ -0.52
PDLIM1P1-201ENST00000604187 UGP2Q16851 508 aa11.82□□□□□ -0.52
PDLIM1P1-201ENST00000604187 CAPRIN2Q6IMN6 1127 aaKnown RBP11.82□□□□□ -0.52
PDLIM1P1-201ENST00000604187 KLHL10Q6JEL2 608 aa11.82□□□□□ -0.52
PDLIM1P1-201ENST00000604187 TRNP1Q6NT89 227 aa11.82□□□□□ -0.52
PDLIM1P1-201ENST00000604187 TTI2Q6NXR4 508 aa11.82□□□□□ -0.52
PDLIM1P1-201ENST00000604187 C16orf46Q6P387 395 aa11.82□□□□□ -0.52
PDLIM1P1-201ENST00000604187 TRIM65Q6PJ69 517 aa11.82□□□□□ -0.52
PDLIM1P1-201ENST00000604187 NLRP14Q86W24 1093 aa11.82□□□□□ -0.52
PDLIM1P1-201ENST00000604187 C17orf82Q86X59 251 aaPredicted RBP11.82□□□□□ -0.52
PDLIM1P1-201ENST00000604187 OR4D9Q8NGE8 314 aa11.82□□□□□ -0.52
PDLIM1P1-201ENST00000604187 DHTKD1Q96HY7 919 aaPredicted RBP11.82□□□□□ -0.52
PDLIM1P1-201ENST00000604187 EXOC2Q96KP1 924 aa11.82□□□□□ -0.52
PDLIM1P1-201ENST00000604187 CFAP57Q96MR6 1250 aa11.82□□□□□ -0.52
PDLIM1P1-201ENST00000604187 CTRCQ99895 268 aa11.82□□□□□ -0.52
PDLIM1P1-201ENST00000604187 EFHD1Q9BUP0 239 aa11.82□□□□□ -0.52
PDLIM1P1-201ENST00000604187 MAGEH1Q9H213 219 aa11.82□□□□□ -0.52
PDLIM1P1-201ENST00000604187 WDR26Q9H7D7 661 aa11.82□□□□□ -0.52
PDLIM1P1-201ENST00000604187 PRDM8Q9NQV8 689 aa11.82□□□□□ -0.52
PDLIM1P1-201ENST00000604187 TMEM51Q9NW97 253 aa11.82□□□□□ -0.52
PDLIM1P1-201ENST00000604187 MFHAS1Q9Y4C4 1052 aa11.82□□□□□ -0.52
PDLIM1P1-201ENST00000604187 PRRC2CQ9Y520 2896 aaKnown RBP11.82□□□□□ -0.52
PDLIM1P1-201ENST00000604187 TSPAN11A1L157 253 aa11.81□□□□□ -0.52
PDLIM1P1-201ENST00000604187 PRSS38A1L453 326 aa11.81□□□□□ -0.52
PDLIM1P1-201ENST00000604187 ZSCAN5CA6NGD5 496 aaPredicted RBP11.81□□□□□ -0.52
PDLIM1P1-201ENST00000604187 TNFRSF10CO14798 259 aa11.81□□□□□ -0.52
PDLIM1P1-201ENST00000604187 KDELR3O43731 214 aa11.81□□□□□ -0.52
PDLIM1P1-201ENST00000604187 RECQL5O94762 991 aaPredicted RBP11.81□□□□□ -0.52
PDLIM1P1-201ENST00000604187 ECEL1O95672 775 aa11.81□□□□□ -0.52
PDLIM1P1-201ENST00000604187 FGF1P05230 155 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms