RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 ARL8BQ9NVJ2 186 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 GDAP2Q9NXN4 497 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 TNFRSF10DQ9UBN6 386 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 SLC22A14Q9Y267 594 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 NUP188Q5SRE5 1749 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 LAMB4A4D0S4 1761 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 MEGF6O75095 1541 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 TEX51A0A1B0GUA7 166 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 LGALS16A8MUM7 142 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 H0YIN7 160 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 RBAK-RBAKDNI3L0D1 243 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 LINC01387J3KSC0 135 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 PSMD12O00232 456 aaPredicted RBP4.76□□□□□ -1.65
LINC01109-201ENST00000603837 ACKR2O00590 384 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 SH2B2O14492 632 aaPredicted RBP4.76□□□□□ -1.65
LINC01109-201ENST00000603837 FPGTO14772 594 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 DCLK1O15075 740 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 MSI1O43347 362 aaKnown RBP4.76□□□□□ -1.65
LINC01109-201ENST00000603837 DENRO43583 198 aaKnown RBP4.76□□□□□ -1.65
LINC01109-201ENST00000603837 NDUFA2O43678 99 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 VEGFDO43915 354 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 CIDEAO60543 219 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 XYLBO75191 536 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 SEMA3DO95025 777 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 GGPS1O95749 300 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 INHBBP09529 407 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 FAM58BPP0C7Q3 252 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 JMJD7P0C870 316 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 KRT3P12035 628 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 MYCLP12524 364 aaPredicted RBP4.76□□□□□ -1.65
LINC01109-201ENST00000603837 ZNF23P17027 643 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 NPR3P17342 541 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 PLCG1P19174 1290 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 CSTF2P33240 577 aaKnown RBP eCLIP4.76□□□□□ -1.65
LINC01109-201ENST00000603837 CASP6P55212 293 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 NLRP11P59045 1033 aaKnown RBP4.76□□□□□ -1.65
LINC01109-201ENST00000603837 MYBPC1Q00872 1141 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 IL9RQ01113 521 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 PRKCZQ05513 592 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 RAPSNQ13702 412 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 POU6F1Q14863 301 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 TRIP10Q15642 601 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 FAM189A2Q15884 450 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 DGKDQ16760 1214 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 TNFAIP8L3Q5GJ75 292 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 ATAT1Q5SQI0 421 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 ATAD3BQ5T9A4 648 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 C1orf146Q5VVC0 180 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 ANKRD40Q6AI12 368 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 LYPD4Q6UWN0 246 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 NECAB2Q7Z6G3 386 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 TTC7BQ86TV6 843 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 NKAIN4Q8IVV8 208 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 SMYD4Q8IYR2 804 aaPredicted RBP4.76□□□□□ -1.65
LINC01109-201ENST00000603837 FBXL6Q8N531 539 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 FANK1Q8TC84 345 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 SCFD2Q8WU76 684 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 SEPT8Q92599 483 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 LPPQ93052 612 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 PTCD3Q96EY7 689 aaKnown RBP4.76□□□□□ -1.65
LINC01109-201ENST00000603837 TOE1Q96GM8 510 aaKnown RBP4.76□□□□□ -1.65
LINC01109-201ENST00000603837 HEXIM2Q96MH2 286 aaKnown RBP4.76□□□□□ -1.65
LINC01109-201ENST00000603837 TMEM68Q96MH6 324 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 CSRNP1Q96S65 589 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 CDC6Q99741 560 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 WACQ9BTA9 647 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 NOC4LQ9BVI4 516 aaKnown RBP4.76□□□□□ -1.65
LINC01109-201ENST00000603837 PINK1Q9BXM7 581 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 OR2B2Q9GZK3 357 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 FBRSL1Q9HCM7 1045 aaKnown RBP4.76□□□□□ -1.65
LINC01109-201ENST00000603837 AGPAT5Q9NUQ2 364 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 ADPRHL2Q9NX46 363 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 OR6C2Q9NZP2 312 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 KIF17Q9P2E2 1029 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 KCND3Q9UK17 655 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 PCDHB10Q9UN67 800 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 POLIQ9UNA4 740 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 AKT3Q9Y243 479 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 CPQQ9Y646 472 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 LTBP3Q9NS15 1303 aa4.75□□□□□ -1.65
LINC01109-201ENST00000603837 SERTM2A0A1B0GWG4 89 aa4.75□□□□□ -1.65
LINC01109-201ENST00000603837 A0A1W2PQ72 361 aa4.75□□□□□ -1.65
LINC01109-201ENST00000603837 CCDC188H7C350 402 aa4.75□□□□□ -1.65
LINC01109-201ENST00000603837 CLDN3O15551 220 aa4.75□□□□□ -1.65
LINC01109-201ENST00000603837 MAGEC1O60732 1142 aa4.75□□□□□ -1.65
LINC01109-201ENST00000603837 CELA2BP08218 269 aaPredicted RBP4.75□□□□□ -1.65
LINC01109-201ENST00000603837 SRGAP2CP0DJJ0 459 aa4.75□□□□□ -1.65
LINC01109-201ENST00000603837 SRGAP2BP0DMP2 458 aa4.75□□□□□ -1.65
LINC01109-201ENST00000603837 FDPSP14324 419 aaKnown RBP4.75□□□□□ -1.65
LINC01109-201ENST00000603837 BRAFP15056 766 aa4.75□□□□□ -1.65
LINC01109-201ENST00000603837 CREB1P16220 341 aa4.75□□□□□ -1.65
LINC01109-201ENST00000603837 AHCYP23526 432 aa4.75□□□□□ -1.65
LINC01109-201ENST00000603837 FOXN2P32314 431 aa4.75□□□□□ -1.65
LINC01109-201ENST00000603837 NUP62P37198 522 aaPredicted RBP4.75□□□□□ -1.65
LINC01109-201ENST00000603837 ALDH1A3P47895 512 aa4.75□□□□□ -1.65
LINC01109-201ENST00000603837 MAPKAPK2P49137 400 aa4.75□□□□□ -1.65
LINC01109-201ENST00000603837 GATMP50440 423 aa4.75□□□□□ -1.65
LINC01109-201ENST00000603837 BMXP51813 675 aa4.75□□□□□ -1.65
LINC01109-201ENST00000603837 ARHGDIAP52565 204 aa4.75□□□□□ -1.65
LINC01109-201ENST00000603837 GPX6P59796 221 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms