RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 UBTFL6P0CB48 400 aaPredicted RBP5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 SELPP16109 830 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 DRD4P21917 467 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 TCEA1P23193 301 aaKnown RBP5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 MCM7P33993 719 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 CCR4P51679 360 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 IST1P53990 364 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 SSTP61278 116 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 AMPD2Q01433 879 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 TNP2Q05952 138 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 GFPT1Q06210 699 aaPredicted RBP5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 TSTA3Q13630 321 aaPredicted RBP5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 NOMO1Q15155 1222 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 ZMYND11Q15326 602 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 TGFBIQ15582 683 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 PARP6Q2NL67 630 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 PPP6R3Q5H9R7 873 aaPredicted RBP5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 ASRGL1Q7L266 308 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 ADAT2Q7Z6V5 191 aaKnown RBP5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 COMTD1Q86VU5 262 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 SFR1Q86XK3 245 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 DENND6AQ8IWF6 608 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 MRPL43Q8N983 215 aaKnown RBP5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 GLIS1Q8NBF1 620 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 ZNF248Q8NDW4 579 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 NUDT8Q8WV74 236 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 GRAMD1AQ96CP6 724 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 KLHL29Q96CT2 875 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 MRM3Q9HC36 420 aaKnown RBP5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 SYTL2Q9HCH5 934 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 TREM1Q9NP99 234 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 LTB4R2Q9NPC1 389 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 TAS2R7Q9NYW3 318 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 USP36Q9P275 1121 aaKnown RBP5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 NCDNQ9UBB6 729 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 STK17AQ9UEE5 414 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 SLC12A6Q9UHW9 1150 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 AJAP1Q9UKB5 411 aaPredicted RBP5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 APPL1Q9UKG1 709 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 ROBO2Q9HCK4 1378 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 OVOS2A0A0G2JMS6 1433 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 KIAA0232Q92628 1395 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 FAM237AA0A1B0GTK4 181 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 CCDC154A6NI56 674 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 F8W810 466 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 DYNC1LI2O43237 492 aaPredicted RBP5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 ECE2O60344 883 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 PPM1BO75688 479 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 VNN2O95498 520 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 TGFAP01135 160 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 PRLP01236 227 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 HMBSP08397 361 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 UMPSP11172 480 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 PIM1P11309 404 aaPredicted RBP5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 LAMP2P13473 410 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 ATF6P18850 670 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 PTPN3P26045 913 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 CAPZA2P47755 286 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 MAP2K6P52564 334 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 NOMO3P69849 1222 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 RAB30Q15771 203 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 GALNTL6Q49A17 601 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 NOMO2Q5JPE7 1267 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 GRTP1Q5TC63 336 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 FOXR2Q6PJQ5 311 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 DHRS4L2Q6PKH6 230 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 MFSD7Q6UXD7 560 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 TRIM72Q6ZMU5 477 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 TAF8Q7Z7C8 310 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 KBTBD6Q86V97 674 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 VSTM4Q8IW00 320 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 NECAB1Q8N987 351 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 IL31RAQ8NI17 732 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 GIPC3Q8TF64 312 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 ART5Q96L15 291 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 VPS35Q96QK1 796 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 XPO6Q96QU8 1125 aaKnown RBP5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 TBCDQ9BTW9 1192 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 TMEM117Q9H0C3 514 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 CRISPLD1Q9H336 500 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 ERVK-5Q9HDB9 667 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 TMOD3Q9NYL9 352 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 MRPL15Q9P015 296 aaKnown RBP5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 NKX1-2Q9UD57 310 aaPredicted RBP5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 SOX13Q9UN79 622 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 RUVBL1Q9Y265 456 aaKnown RBP5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 SLC22A14Q9Y267 594 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 OVOS2A0A0J9YW53 1432 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 OVOS2Q6IE36 1432 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 MIF4GDA9UHW6 222 aaKnown RBP5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 ZBTB42B2RXF5 422 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 CLDN3O15551 220 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 SLCO2B1O94956 709 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 GDF11O95390 407 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 SCGB1D1O95968 90 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 PNPP00491 289 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 CLEC3BP05452 202 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 GSTM1P09488 218 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 MYZAPP0CAP1 466 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 SLC5A2P31639 672 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms