RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 ITGB7P26010 798 aa10.16□□□□□ -0.78
UPF1-213ENST00000601981 CD6P30203 668 aa10.16□□□□□ -0.78
UPF1-213ENST00000601981 P2RY2P41231 377 aa10.16□□□□□ -0.78
UPF1-213ENST00000601981 TPMTP51580 245 aa10.16□□□□□ -0.78
UPF1-213ENST00000601981 BCL2L1Q07817 233 aa10.16□□□□□ -0.78
UPF1-213ENST00000601981 WASHC5Q12768 1159 aa10.16□□□□□ -0.78
UPF1-213ENST00000601981 PDIA2Q13087 525 aaKnown RBP10.16□□□□□ -0.78
UPF1-213ENST00000601981 STAT4Q14765 748 aa10.16□□□□□ -0.78
UPF1-213ENST00000601981 PARP6Q2NL67 630 aa10.16□□□□□ -0.78
UPF1-213ENST00000601981 ZNF805Q5CZA5 627 aa10.16□□□□□ -0.78
UPF1-213ENST00000601981 DNAJC21Q5F1R6 531 aaKnown RBP10.16□□□□□ -0.78
UPF1-213ENST00000601981 ARSIQ5FYB1 569 aa10.16□□□□□ -0.78
UPF1-213ENST00000601981 FNBP1LQ5T0N5 605 aa10.16□□□□□ -0.78
UPF1-213ENST00000601981 UBAP2Q5T6F2 1119 aaKnown RBP10.16□□□□□ -0.78
UPF1-213ENST00000601981 ITPRIPL1Q6GPH6 555 aa10.16□□□□□ -0.78
UPF1-213ENST00000601981 FBXL19Q6PCT2 694 aa10.16□□□□□ -0.78
UPF1-213ENST00000601981 GDPD4Q6W3E5 623 aa10.16□□□□□ -0.78
UPF1-213ENST00000601981 ZBED8Q8IZ13 594 aa10.16□□□□□ -0.78
UPF1-213ENST00000601981 NDUFAF2Q8N183 169 aa10.16□□□□□ -0.78
UPF1-213ENST00000601981 CHST14Q8NCH0 376 aa10.16□□□□□ -0.78
UPF1-213ENST00000601981 OR6K2Q8NGY2 324 aa10.16□□□□□ -0.78
UPF1-213ENST00000601981 GAB3Q8WWW8 586 aa10.16□□□□□ -0.78
UPF1-213ENST00000601981 NELL1Q92832 810 aa10.16□□□□□ -0.78
UPF1-213ENST00000601981 ZBTB9Q96C00 473 aa10.16□□□□□ -0.78
UPF1-213ENST00000601981 C9orf72Q96LT7 481 aa10.16□□□□□ -0.78
UPF1-213ENST00000601981 ZNF641Q96N77 438 aaPredicted RBP10.16□□□□□ -0.78
UPF1-213ENST00000601981 SERPINB12Q96P63 405 aa10.16□□□□□ -0.78
UPF1-213ENST00000601981 IL12RB2Q99665 862 aa10.16□□□□□ -0.78
UPF1-213ENST00000601981 CCDC77Q9BR77 488 aa10.16□□□□□ -0.78
UPF1-213ENST00000601981 BTBD1Q9H0C5 482 aa10.16□□□□□ -0.78
UPF1-213ENST00000601981 STMN4Q9H169 189 aaPredicted RBP10.16□□□□□ -0.78
UPF1-213ENST00000601981 PPCSQ9HAB8 311 aa10.16□□□□□ -0.78
UPF1-213ENST00000601981 ETNK1Q9HBU6 452 aa10.16□□□□□ -0.78
UPF1-213ENST00000601981 SGK2Q9HBY8 427 aa10.16□□□□□ -0.78
UPF1-213ENST00000601981 XAB2Q9HCS7 855 aaKnown RBP10.16□□□□□ -0.78
UPF1-213ENST00000601981 ITM2CQ9NQX7 267 aa10.16□□□□□ -0.78
UPF1-213ENST00000601981 FBXL12Q9NXK8 326 aa10.16□□□□□ -0.78
UPF1-213ENST00000601981 USP36Q9P275 1121 aaKnown RBP10.16□□□□□ -0.78
UPF1-213ENST00000601981 KLHL8Q9P2G9 620 aaPredicted RBP10.16□□□□□ -0.78
UPF1-213ENST00000601981 EVLQ9UI08 416 aaPredicted RBP10.16□□□□□ -0.78
UPF1-213ENST00000601981 TRHDEQ9UKU6 1024 aa10.16□□□□□ -0.78
UPF1-213ENST00000601981 CYP8B1Q9UNU6 501 aa10.16□□□□□ -0.78
UPF1-213ENST00000601981 TRPM6Q9BX84 2022 aa10.16□□□□□ -0.78
UPF1-213ENST00000601981 NUMA1Q14980 2115 aa10.15□□□□□ -0.78
UPF1-213ENST00000601981 ABCA7Q8IZY2 2146 aa10.15□□□□□ -0.78
UPF1-213ENST00000601981 A0A1W2PP55 124 aa10.15□□□□□ -0.78
UPF1-213ENST00000601981 LRRC72A6NJI9 287 aa10.15□□□□□ -0.78
UPF1-213ENST00000601981 RASGRF2O14827 1237 aa10.15□□□□□ -0.78
UPF1-213ENST00000601981 INSIG1O15503 277 aa10.15□□□□□ -0.78
UPF1-213ENST00000601981 SOCS5O75159 536 aa10.15□□□□□ -0.78
UPF1-213ENST00000601981 SPAG6O75602 509 aa10.15□□□□□ -0.78
UPF1-213ENST00000601981 RHOBTB1O94844 696 aa10.15□□□□□ -0.78
UPF1-213ENST00000601981 METTL18O95568 372 aa10.15□□□□□ -0.78
UPF1-213ENST00000601981 AGTP01019 485 aa10.15□□□□□ -0.78
UPF1-213ENST00000601981 IGLV3-19P01714 112 aa10.15□□□□□ -0.78
UPF1-213ENST00000601981 HLA-DQB2P05538 268 aa10.15□□□□□ -0.78
UPF1-213ENST00000601981 APRTP07741 180 aa10.15□□□□□ -0.78
UPF1-213ENST00000601981 MLNP12872 115 aa10.15□□□□□ -0.78
UPF1-213ENST00000601981 PTPN3P26045 913 aa10.15□□□□□ -0.78
UPF1-213ENST00000601981 PHBP35232 272 aa10.15□□□□□ -0.78
UPF1-213ENST00000601981 MAGEA3P43357 314 aa10.15□□□□□ -0.78
UPF1-213ENST00000601981 SUOXP51687 545 aa10.15□□□□□ -0.78
UPF1-213ENST00000601981 NEK3P51956 506 aa10.15□□□□□ -0.78
UPF1-213ENST00000601981 POLR2LP62875 67 aaKnown RBP10.15□□□□□ -0.78
UPF1-213ENST00000601981 SARNPP82979 210 aaKnown RBP10.15□□□□□ -0.78
UPF1-213ENST00000601981 FASTKD3Q14CZ7 662 aaKnown RBP10.15□□□□□ -0.78
UPF1-213ENST00000601981 BBS9Q3SYG4 887 aa10.15□□□□□ -0.78
UPF1-213ENST00000601981 CCDC38Q502W7 563 aa10.15□□□□□ -0.78
UPF1-213ENST00000601981 TEX44Q53QW1 395 aa10.15□□□□□ -0.78
UPF1-213ENST00000601981 FAXCQ5TGI0 409 aa10.15□□□□□ -0.78
UPF1-213ENST00000601981 BRAT1Q6PJG6 821 aa10.15□□□□□ -0.78
UPF1-213ENST00000601981 ERN2Q76MJ5 926 aaKnown RBP10.15□□□□□ -0.78
UPF1-213ENST00000601981 ZNF567Q8N184 647 aa10.15□□□□□ -0.78
UPF1-213ENST00000601981 RIBC1Q8N443 379 aaPredicted RBP10.15□□□□□ -0.78
UPF1-213ENST00000601981 HDDC3Q8N4P3 179 aa10.15□□□□□ -0.78
UPF1-213ENST00000601981 TAB3Q8N5C8 712 aaPredicted RBP10.15□□□□□ -0.78
UPF1-213ENST00000601981 ZBTB44Q8NCP5 570 aa10.15□□□□□ -0.78
UPF1-213ENST00000601981 PRSS33Q8NF86 280 aa10.15□□□□□ -0.78
UPF1-213ENST00000601981 HCAR2Q8TDS4 363 aa10.15□□□□□ -0.78
UPF1-213ENST00000601981 PYROXD1Q8WU10 500 aa10.15□□□□□ -0.78
UPF1-213ENST00000601981 LRRN4Q8WUT4 740 aa10.15□□□□□ -0.78
UPF1-213ENST00000601981 ATOH1Q92858 354 aaPredicted RBP10.15□□□□□ -0.78
UPF1-213ENST00000601981 RAB7BQ96AH8 199 aa10.15□□□□□ -0.78
UPF1-213ENST00000601981 TLCD1Q96CP7 247 aa10.15□□□□□ -0.78
UPF1-213ENST00000601981 LRRC39Q96DD0 335 aa10.15□□□□□ -0.78
UPF1-213ENST00000601981 SEMA3CQ99985 751 aa10.15□□□□□ -0.78
UPF1-213ENST00000601981 HDAC8Q9BY41 377 aa10.15□□□□□ -0.78
UPF1-213ENST00000601981 PCED1AQ9H1Q7 454 aa10.15□□□□□ -0.78
UPF1-213ENST00000601981 SLC6A17Q9H1V8 727 aa10.15□□□□□ -0.78
UPF1-213ENST00000601981 GBA3Q9H227 469 aa10.15□□□□□ -0.78
UPF1-213ENST00000601981 SUV39H2Q9H5I1 410 aa10.15□□□□□ -0.78
UPF1-213ENST00000601981 DKK3Q9UBP4 350 aa10.15□□□□□ -0.78
UPF1-213ENST00000601981 WASF2Q9Y6W5 498 aa10.15□□□□□ -0.78
UPF1-213ENST00000601981 CFAP54Q96N23 3096 aa10.14□□□□□ -0.79
UPF1-213ENST00000601981 IGHV1OR15-9A0A0B4J2B8 117 aa10.14□□□□□ -0.79
UPF1-213ENST00000601981 E7EVH7 732 aa10.14□□□□□ -0.79
UPF1-213ENST00000601981 RGS16O15492 202 aaPredicted RBP10.14□□□□□ -0.79
UPF1-213ENST00000601981 CTSLP07711 333 aa10.14□□□□□ -0.79
UPF1-213ENST00000601981 CR2P20023 1033 aa10.14□□□□□ -0.79
UPF1-213ENST00000601981 NR1D1P20393 614 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms