RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 EIF3CQ99613 913 aaKnown RBP18.1■□□□□ 0.49
CHMP2A-208ENST00000601220 SNRNP25Q9BV90 132 aaKnown RBP18.1■□□□□ 0.49
CHMP2A-208ENST00000601220 TRIM7Q9C029 511 aa18.1■□□□□ 0.49
CHMP2A-208ENST00000601220 DHX35Q9H5Z1 703 aaKnown RBP18.1■□□□□ 0.49
CHMP2A-208ENST00000601220 DONSONQ9NYP3 566 aa18.1■□□□□ 0.49
CHMP2A-208ENST00000601220 KLQ9UEF7 1012 aa18.1■□□□□ 0.49
CHMP2A-208ENST00000601220 TMEM202A6NGA9 273 aa18.09■□□□□ 0.49
CHMP2A-208ENST00000601220 ARHGAP42A6NI28 874 aa18.09■□□□□ 0.49
CHMP2A-208ENST00000601220 K7ENP7 123 aa18.09■□□□□ 0.49
CHMP2A-208ENST00000601220 TEX33O43247 280 aa18.09■□□□□ 0.49
CHMP2A-208ENST00000601220 PALMO75781 387 aa18.09■□□□□ 0.49
CHMP2A-208ENST00000601220 RECQL5O94762 991 aaPredicted RBP18.09■□□□□ 0.49
CHMP2A-208ENST00000601220 PCCBP05166 539 aa18.09■□□□□ 0.49
CHMP2A-208ENST00000601220 ITGA2BP08514 1039 aa18.09■□□□□ 0.49
CHMP2A-208ENST00000601220 HOXC4P09017 264 aaPredicted RBP18.09■□□□□ 0.49
CHMP2A-208ENST00000601220 CTSEP14091 401 aa18.09■□□□□ 0.49
CHMP2A-208ENST00000601220 ERCC2P18074 760 aa18.09■□□□□ 0.49
CHMP2A-208ENST00000601220 CDK11BP21127 795 aaKnown RBP18.09■□□□□ 0.49
CHMP2A-208ENST00000601220 PSMA2P25787 234 aa18.09■□□□□ 0.49
CHMP2A-208ENST00000601220 TRIM23P36406 574 aa18.09■□□□□ 0.49
CHMP2A-208ENST00000601220 INO80CQ6PI98 192 aaPredicted RBP18.09■□□□□ 0.49
CHMP2A-208ENST00000601220 FOXR1Q6PIV2 292 aa18.09■□□□□ 0.49
CHMP2A-208ENST00000601220 SASS6Q6UVJ0 657 aa18.09■□□□□ 0.49
CHMP2A-208ENST00000601220 LIPIQ6XZB0 460 aa18.09■□□□□ 0.49
CHMP2A-208ENST00000601220 GKN2Q86XP6 184 aa18.09■□□□□ 0.49
CHMP2A-208ENST00000601220 SFTPA2Q8IWL1 248 aa18.09■□□□□ 0.49
CHMP2A-208ENST00000601220 TP53INP2Q8IXH6 220 aa18.09■□□□□ 0.49
CHMP2A-208ENST00000601220 PELI3Q8N2H9 469 aa18.09■□□□□ 0.49
CHMP2A-208ENST00000601220 ARL14Q8N4G2 192 aa18.09■□□□□ 0.49
CHMP2A-208ENST00000601220 OR1E3Q8WZA6 343 aa18.09■□□□□ 0.49
CHMP2A-208ENST00000601220 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.09■□□□□ 0.49
CHMP2A-208ENST00000601220 SEMA4CQ9C0C4 833 aa18.09■□□□□ 0.49
CHMP2A-208ENST00000601220 ATP13A3Q9H7F0 1226 aa18.09■□□□□ 0.49
CHMP2A-208ENST00000601220 PARVAQ9NVD7 372 aa18.09■□□□□ 0.49
CHMP2A-208ENST00000601220 PCSK1NQ9UHG2 260 aa18.09■□□□□ 0.49
CHMP2A-208ENST00000601220 MYO6Q9UM54 1294 aa18.09■□□□□ 0.49
CHMP2A-208ENST00000601220 DOLKQ9UPQ8 538 aa18.09■□□□□ 0.49
CHMP2A-208ENST00000601220 TMCO5BA8MYB1 307 aa18.08■□□□□ 0.48
CHMP2A-208ENST00000601220 D6RAR5 112 aa18.08■□□□□ 0.48
CHMP2A-208ENST00000601220 EFSO43281 561 aa18.08■□□□□ 0.48
CHMP2A-208ENST00000601220 ATMINO43313 823 aaPredicted RBP18.08■□□□□ 0.48
CHMP2A-208ENST00000601220 TNFP01375 233 aa18.08■□□□□ 0.48
CHMP2A-208ENST00000601220 CCDC172P0C7W6 258 aa18.08■□□□□ 0.48
CHMP2A-208ENST00000601220 TNFAIP3P21580 790 aa18.08■□□□□ 0.48
CHMP2A-208ENST00000601220 SERPINA4P29622 427 aa18.08■□□□□ 0.48
CHMP2A-208ENST00000601220 HCAR3P49019 387 aa18.08■□□□□ 0.48
CHMP2A-208ENST00000601220 KIAA1024LP59773 190 aa18.08■□□□□ 0.48
CHMP2A-208ENST00000601220 STX1AQ16623 288 aa18.08■□□□□ 0.48
CHMP2A-208ENST00000601220 TAF1BQ53T94 588 aaPredicted RBP18.08■□□□□ 0.48
CHMP2A-208ENST00000601220 ZNF605Q86T29 641 aa18.08■□□□□ 0.48
CHMP2A-208ENST00000601220 SPOCK2Q92563 424 aa18.08■□□□□ 0.48
CHMP2A-208ENST00000601220 CCDC97Q96F63 343 aaPredicted RBP18.08■□□□□ 0.48
CHMP2A-208ENST00000601220 LRRN3Q9H3W5 708 aa18.08■□□□□ 0.48
CHMP2A-208ENST00000601220 FGF22Q9HCT0 170 aa18.08■□□□□ 0.48
CHMP2A-208ENST00000601220 MRPL40Q9NQ50 206 aaKnown RBP18.08■□□□□ 0.48
CHMP2A-208ENST00000601220 APPL1Q9UKG1 709 aa18.08■□□□□ 0.48
CHMP2A-208ENST00000601220 PCDHGA7Q9Y5G6 932 aa18.08■□□□□ 0.48
CHMP2A-208ENST00000601220 TNFRSF10CO14798 259 aa18.07■□□□□ 0.48
CHMP2A-208ENST00000601220 PLD2O14939 933 aa18.07■□□□□ 0.48
CHMP2A-208ENST00000601220 NOBOXO60393 691 aa18.07■□□□□ 0.48
CHMP2A-208ENST00000601220 RPLP0P05388 317 aaKnown RBP18.07■□□□□ 0.48
CHMP2A-208ENST00000601220 MIPP30301 263 aa18.07■□□□□ 0.48
CHMP2A-208ENST00000601220 UGT1A5P35504 534 aa18.07■□□□□ 0.48
CHMP2A-208ENST00000601220 IL10RBQ08334 325 aa18.07■□□□□ 0.48
CHMP2A-208ENST00000601220 DPYSQ14117 519 aa18.07■□□□□ 0.48
CHMP2A-208ENST00000601220 RFTN1Q14699 578 aaPredicted RBP18.07■□□□□ 0.48
CHMP2A-208ENST00000601220 E4F1Q66K89 784 aaPredicted RBP18.07■□□□□ 0.48
CHMP2A-208ENST00000601220 DPPA4Q7L190 304 aa18.07■□□□□ 0.48
CHMP2A-208ENST00000601220 CBARPQ8N350 705 aaPredicted RBP18.07■□□□□ 0.48
CHMP2A-208ENST00000601220 OR6C4Q8NGE1 309 aa18.07■□□□□ 0.48
CHMP2A-208ENST00000601220 OR56A4Q8NGH8 313 aa18.07■□□□□ 0.48
CHMP2A-208ENST00000601220 ATL2Q8NHH9 583 aa18.07■□□□□ 0.48
CHMP2A-208ENST00000601220 FNIP1Q8TF40 1166 aa18.07■□□□□ 0.48
CHMP2A-208ENST00000601220 PSKH2Q96QS6 385 aa18.07■□□□□ 0.48
CHMP2A-208ENST00000601220 GFM1Q96RP9 751 aaKnown RBP18.07■□□□□ 0.48
CHMP2A-208ENST00000601220 LGR4Q9BXB1 951 aa18.07■□□□□ 0.48
CHMP2A-208ENST00000601220 FOXP3Q9BZS1 431 aa18.07■□□□□ 0.48
CHMP2A-208ENST00000601220 CWC15Q9P013 229 aaKnown RBP18.07■□□□□ 0.48
CHMP2A-208ENST00000601220 PEX11BO96011 259 aa18.06■□□□□ 0.48
CHMP2A-208ENST00000601220 SLC5A2P31639 672 aa18.06■□□□□ 0.48
CHMP2A-208ENST00000601220 CCKBRP32239 447 aa18.06■□□□□ 0.48
CHMP2A-208ENST00000601220 ZFP36L1Q07352 338 aaKnown RBP18.06■□□□□ 0.48
CHMP2A-208ENST00000601220 BCL2L1Q07817 233 aa18.06■□□□□ 0.48
CHMP2A-208ENST00000601220 EIF3IQ13347 325 aaKnown RBP18.06■□□□□ 0.48
CHMP2A-208ENST00000601220 CFAP58Q5T655 872 aa18.06■□□□□ 0.48
CHMP2A-208ENST00000601220 PPP1R2P3Q6NXS1 205 aa18.06■□□□□ 0.48
CHMP2A-208ENST00000601220 RAB11FIP2Q7L804 512 aa18.06■□□□□ 0.48
CHMP2A-208ENST00000601220 ZNF571Q7Z3V5 609 aaPredicted RBP18.06■□□□□ 0.48
CHMP2A-208ENST00000601220 PSTKQ8IV42 348 aaKnown RBP18.06■□□□□ 0.48
CHMP2A-208ENST00000601220 FBXO39Q8N4B4 442 aa18.06■□□□□ 0.48
CHMP2A-208ENST00000601220 COQ10AQ96MF6 247 aa18.06■□□□□ 0.48
CHMP2A-208ENST00000601220 CINPQ9BW66 212 aaPredicted RBP18.06■□□□□ 0.48
CHMP2A-208ENST00000601220 TMEM168Q9H0V1 697 aa18.06■□□□□ 0.48
CHMP2A-208ENST00000601220 SYNDIG1Q9H7V2 258 aa18.06■□□□□ 0.48
CHMP2A-208ENST00000601220 RTN4Q9NQC3 1192 aaKnown RBP18.06■□□□□ 0.48
CHMP2A-208ENST00000601220 ACSL6Q9UKU0 697 aa18.06■□□□□ 0.48
CHMP2A-208ENST00000601220 LRRK1Q38SD2 2015 aa18.06■□□□□ 0.48
CHMP2A-208ENST00000601220 LRP4O75096 1905 aa18.06■□□□□ 0.48
CHMP2A-208ENST00000601220 TTC24A2A3L6 582 aaPredicted RBP18.05■□□□□ 0.48
CHMP2A-208ENST00000601220 CAPN8A6NHC0 703 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms