RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 LIPIQ6XZB0 460 aa17.09■□□□□ 0.33
SCAF1-204ENST00000601038 ARHGAP36Q6ZRI8 547 aa17.09■□□□□ 0.33
SCAF1-204ENST00000601038 RD3Q7Z3Z2 195 aa17.09■□□□□ 0.33
SCAF1-204ENST00000601038 LZTR1Q8N653 840 aa17.09■□□□□ 0.33
SCAF1-204ENST00000601038 NPWQ8N729 165 aa17.09■□□□□ 0.33
SCAF1-204ENST00000601038 PCDH19Q8TAB3 1148 aa17.09■□□□□ 0.33
SCAF1-204ENST00000601038 PRR11Q96HE9 360 aaPredicted RBP17.09■□□□□ 0.33
SCAF1-204ENST00000601038 WDR92Q96MX6 357 aa17.09■□□□□ 0.33
SCAF1-204ENST00000601038 TRIM7Q9C029 511 aa17.09■□□□□ 0.33
SCAF1-204ENST00000601038 CWC15Q9P013 229 aaKnown RBP17.09■□□□□ 0.33
SCAF1-204ENST00000601038 KLQ9UEF7 1012 aa17.09■□□□□ 0.33
SCAF1-204ENST00000601038 CNOT8Q9UFF9 292 aaKnown RBP17.09■□□□□ 0.33
SCAF1-204ENST00000601038 DGKBQ9Y6T7 804 aa17.09■□□□□ 0.33
SCAF1-204ENST00000601038 A0A1W2PQC6 194 aa17.08■□□□□ 0.32
SCAF1-204ENST00000601038 DDX3XO00571 662 aaKnown RBP eCLIP17.08■□□□□ 0.326e-7■■□□□ 12.6
SCAF1-204ENST00000601038 TRAFD1O14545 582 aaPredicted RBP17.08■□□□□ 0.32
SCAF1-204ENST00000601038 LRCH4O75427 683 aa17.08■□□□□ 0.32
SCAF1-204ENST00000601038 RECQL5O94762 991 aaPredicted RBP17.08■□□□□ 0.32
SCAF1-204ENST00000601038 TNFP01375 233 aa17.08■□□□□ 0.32
SCAF1-204ENST00000601038 PCCBP05166 539 aa17.08■□□□□ 0.32
SCAF1-204ENST00000601038 MLLT3P42568 568 aaPredicted RBP17.08■□□□□ 0.32
SCAF1-204ENST00000601038 SCNN1BP51168 640 aa17.08■□□□□ 0.32
SCAF1-204ENST00000601038 RENBPP51606 427 aa17.08■□□□□ 0.32
SCAF1-204ENST00000601038 TMPRSS3P57727 454 aa17.08■□□□□ 0.32
SCAF1-204ENST00000601038 KLHL30Q0D2K2 578 aa17.08■□□□□ 0.32
SCAF1-204ENST00000601038 C19orf57Q0VDD7 668 aa17.08■□□□□ 0.32
SCAF1-204ENST00000601038 DPYSQ14117 519 aa17.08■□□□□ 0.32
SCAF1-204ENST00000601038 KYQ8NBH2 561 aa17.08■□□□□ 0.32
SCAF1-204ENST00000601038 PLA2G15Q8NCC3 412 aa17.08■□□□□ 0.32
SCAF1-204ENST00000601038 WDR36Q8NI36 951 aaKnown RBP17.08■□□□□ 0.32
SCAF1-204ENST00000601038 PSKH2Q96QS6 385 aa17.08■□□□□ 0.32
SCAF1-204ENST00000601038 RBM15Q96T37 977 aaKnown RBP eCLIP17.08■□□□□ 0.32
SCAF1-204ENST00000601038 ZWILCHQ9H900 591 aa17.08■□□□□ 0.32
SCAF1-204ENST00000601038 MRPL47Q9HD33 250 aaKnown RBP17.08■□□□□ 0.32
SCAF1-204ENST00000601038 TMEM63CQ9P1W3 806 aa17.08■□□□□ 0.32
SCAF1-204ENST00000601038 SIRPGQ9P1W8 387 aa17.08■□□□□ 0.32
SCAF1-204ENST00000601038 SEPT3Q9UH03 358 aa17.08■□□□□ 0.32
SCAF1-204ENST00000601038 GPR34Q9UPC5 381 aa17.08■□□□□ 0.32
SCAF1-204ENST00000601038 SCINQ9Y6U3 715 aa17.08■□□□□ 0.32
SCAF1-204ENST00000601038 CDRT15L2A8MXV6 281 aa17.07■□□□□ 0.32
SCAF1-204ENST00000601038 CASC3O15234 703 aaKnown RBP17.07■□□□□ 0.32
SCAF1-204ENST00000601038 KLK10O43240 276 aa17.07■□□□□ 0.32
SCAF1-204ENST00000601038 PRB1P04280 392 aa17.07■□□□□ 0.32
SCAF1-204ENST00000601038 HOXC4P09017 264 aaPredicted RBP17.07■□□□□ 0.32
SCAF1-204ENST00000601038 ELFN1P0C7U0 828 aa17.07■□□□□ 0.32
SCAF1-204ENST00000601038 MYBL1P10243 752 aa17.07■□□□□ 0.32
SCAF1-204ENST00000601038 PCK1P35558 622 aa17.07■□□□□ 0.32
SCAF1-204ENST00000601038 PDX1P52945 283 aa17.07■□□□□ 0.32
SCAF1-204ENST00000601038 KIAA1024LP59773 190 aa17.07■□□□□ 0.32
SCAF1-204ENST00000601038 AP1S1P61966 158 aa17.07■□□□□ 0.32
SCAF1-204ENST00000601038 SKOR1P84550 965 aa17.07■□□□□ 0.32
SCAF1-204ENST00000601038 E4F1Q66K89 784 aaPredicted RBP17.07■□□□□ 0.32
SCAF1-204ENST00000601038 NYAP1Q6ZVC0 841 aa17.07■□□□□ 0.32
SCAF1-204ENST00000601038 DPPA4Q7L190 304 aa17.07■□□□□ 0.32
SCAF1-204ENST00000601038 ARL14Q8N4G2 192 aa17.07■□□□□ 0.32
SCAF1-204ENST00000601038 PAF1Q8N7H5 531 aa17.07■□□□□ 0.32
SCAF1-204ENST00000601038 OR6C4Q8NGE1 309 aa17.07■□□□□ 0.32
SCAF1-204ENST00000601038 OR56A4Q8NGH8 313 aa17.07■□□□□ 0.32
SCAF1-204ENST00000601038 SPOCK2Q92563 424 aa17.07■□□□□ 0.32
SCAF1-204ENST00000601038 ZNF653Q96CK0 615 aa17.07■□□□□ 0.32
SCAF1-204ENST00000601038 TRIM11Q96F44 468 aa17.07■□□□□ 0.32
SCAF1-204ENST00000601038 CCDC97Q96F63 343 aaPredicted RBP17.07■□□□□ 0.32
SCAF1-204ENST00000601038 ZNF599Q96NL3 588 aa17.07■□□□□ 0.32
SCAF1-204ENST00000601038 SSUH2Q9Y2M2 353 aa17.07■□□□□ 0.32
SCAF1-204ENST00000601038 KIF26BQ2KJY2 2108 aa17.06■□□□□ 0.32
SCAF1-204ENST00000601038 ANKRD36A6QL64 1941 aa17.06■□□□□ 0.32
SCAF1-204ENST00000601038 CCDC187A0A096LP49 1063 aa17.06■□□□□ 0.32
SCAF1-204ENST00000601038 A0A1B0GTH6 734 aa17.06■□□□□ 0.32
SCAF1-204ENST00000601038 CACNB4O00305 520 aaPredicted RBP17.06■□□□□ 0.32
SCAF1-204ENST00000601038 TNFRSF10CO14798 259 aa17.06■□□□□ 0.32
SCAF1-204ENST00000601038 KELP23276 732 aa17.06■□□□□ 0.32
SCAF1-204ENST00000601038 TRIM23P36406 574 aa17.06■□□□□ 0.32
SCAF1-204ENST00000601038 SLC10A7Q0GE19 358 aa17.06■□□□□ 0.32
SCAF1-204ENST00000601038 LBRQ14739 615 aaKnown RBP17.06■□□□□ 0.32
SCAF1-204ENST00000601038 TCEA2Q15560 299 aa17.06■□□□□ 0.32
SCAF1-204ENST00000601038 BOLA3Q53S33 107 aa17.06■□□□□ 0.32
SCAF1-204ENST00000601038 TMCO4Q5TGY1 634 aa17.06■□□□□ 0.32
SCAF1-204ENST00000601038 KCTD16Q68DU8 428 aa17.06■□□□□ 0.32
SCAF1-204ENST00000601038 TP53INP2Q8IXH6 220 aa17.06■□□□□ 0.32
SCAF1-204ENST00000601038 FUBP1Q96AE4 644 aaKnown RBP17.06■□□□□ 0.32
SCAF1-204ENST00000601038 CCDC74AQ96AQ1 378 aa17.06■□□□□ 0.32
SCAF1-204ENST00000601038 PDXPQ96GD0 296 aa17.06■□□□□ 0.32
SCAF1-204ENST00000601038 LIN37Q96GY3 246 aaPredicted RBP17.06■□□□□ 0.32
SCAF1-204ENST00000601038 NSMCE3Q96MG7 304 aa17.06■□□□□ 0.32
SCAF1-204ENST00000601038 NAP1L5Q96NT1 182 aaPredicted RBP17.06■□□□□ 0.32
SCAF1-204ENST00000601038 ISCUQ9H1K1 167 aa17.06■□□□□ 0.32
SCAF1-204ENST00000601038 SYNDIG1Q9H7V2 258 aa17.06■□□□□ 0.32
SCAF1-204ENST00000601038 CPNE5Q9HCH3 593 aa17.06■□□□□ 0.32
SCAF1-204ENST00000601038 RABGEF1Q9UJ41 708 aa17.06■□□□□ 0.32
SCAF1-204ENST00000601038 LRP4O75096 1905 aa17.06■□□□□ 0.32
SCAF1-204ENST00000601038 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.05■□□□□ 0.32
SCAF1-204ENST00000601038 A0A1W2PQ67 120 aa17.05■□□□□ 0.32
SCAF1-204ENST00000601038 TMEM202A6NGA9 273 aa17.05■□□□□ 0.32
SCAF1-204ENST00000601038 H3BRJ5 948 aa17.05■□□□□ 0.32
SCAF1-204ENST00000601038 TMX2-CTNND1H3BSU7 103 aa17.05■□□□□ 0.32
SCAF1-204ENST00000601038 ERVH48-1M5A8F1 160 aa17.05■□□□□ 0.32
SCAF1-204ENST00000601038 C1QL1O75973 258 aa17.05■□□□□ 0.32
SCAF1-204ENST00000601038 TNFSF15O95150 251 aa17.05■□□□□ 0.32
SCAF1-204ENST00000601038 SKILP12757 684 aa17.05■□□□□ 0.32
SCAF1-204ENST00000601038 GM2AP17900 193 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms