RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 SEMA4AQ9H3S1 761 aa23.03■■□□□ 1.28
IRF3-227ENST00000600911 PCDH12Q9NPG4 1184 aa23.03■■□□□ 1.28
IRF3-227ENST00000600911 DLGAP2Q9P1A6 1054 aa23.03■■□□□ 1.28
IRF3-227ENST00000600911 B4GALT6Q9UBX8 382 aa23.03■■□□□ 1.28
IRF3-227ENST00000600911 SLC2A6Q9UGQ3 507 aa23.03■■□□□ 1.28
IRF3-227ENST00000600911 PHTF1Q9UMS5 762 aa23.03■■□□□ 1.28
IRF3-227ENST00000600911 A0A1W2PP55 124 aa23.02■■□□□ 1.28
IRF3-227ENST00000600911 NDC80O14777 642 aa23.02■■□□□ 1.28
IRF3-227ENST00000600911 LDB2O43679 373 aa23.02■■□□□ 1.28
IRF3-227ENST00000600911 ALADP13716 330 aa23.02■■□□□ 1.28
IRF3-227ENST00000600911 H2AFXP16104 143 aaPredicted RBP23.02■■□□□ 1.28
IRF3-227ENST00000600911 P2RY2P41231 377 aa23.02■■□□□ 1.28
IRF3-227ENST00000600911 MAGEA4P43358 317 aa23.02■■□□□ 1.28
IRF3-227ENST00000600911 SMAD1Q15797 465 aaKnown RBP23.02■■□□□ 1.28
IRF3-227ENST00000600911 TMEM31Q5JXX7 168 aa23.02■■□□□ 1.28
IRF3-227ENST00000600911 PIP5KL1Q5T9C9 394 aa23.02■■□□□ 1.28
IRF3-227ENST00000600911 ZNF776Q68DI1 518 aaPredicted RBP23.02■■□□□ 1.28
IRF3-227ENST00000600911 FBXO38Q6PIJ6 1188 aa23.02■■□□□ 1.28
IRF3-227ENST00000600911 CENPUQ71F23 418 aa23.02■■□□□ 1.28
IRF3-227ENST00000600911 TTC30BQ8N4P2 665 aa23.02■■□□□ 1.28
IRF3-227ENST00000600911 FCRL3Q96P31 734 aaPredicted RBP23.02■■□□□ 1.28
IRF3-227ENST00000600911 HHIPQ96QV1 700 aa23.02■■□□□ 1.28
IRF3-227ENST00000600911 MCCC1Q96RQ3 725 aaPredicted RBP23.02■■□□□ 1.28
IRF3-227ENST00000600911 NINJ2Q9NZG7 142 aa23.02■■□□□ 1.28
IRF3-227ENST00000600911 SIT1Q9Y3P8 196 aa23.02■■□□□ 1.28
IRF3-227ENST00000600911 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.02■■□□□ 1.28
IRF3-227ENST00000600911 CAPN8A6NHC0 703 aa23.01■■□□□ 1.27
IRF3-227ENST00000600911 UPK3BL1B0FP48 263 aa23.01■■□□□ 1.27
IRF3-227ENST00000600911 UPK3BL2E5RIL1 263 aa23.01■■□□□ 1.27
IRF3-227ENST00000600911 CCL22O00626 93 aa23.01■■□□□ 1.27
IRF3-227ENST00000600911 SLC4A1P02730 911 aa23.01■■□□□ 1.27
IRF3-227ENST00000600911 CA4P22748 312 aa23.01■■□□□ 1.27
IRF3-227ENST00000600911 NMBRP28336 390 aa23.01■■□□□ 1.27
IRF3-227ENST00000600911 NPY2RP49146 381 aa23.01■■□□□ 1.27
IRF3-227ENST00000600911 GPX6P59796 221 aa23.01■■□□□ 1.27
IRF3-227ENST00000600911 RALGDSQ12967 914 aa23.01■■□□□ 1.27
IRF3-227ENST00000600911 MTAPQ13126 283 aa23.01■■□□□ 1.27
IRF3-227ENST00000600911 SEPT6Q14141 434 aa23.01■■□□□ 1.27
IRF3-227ENST00000600911 E2F5Q15329 346 aa23.01■■□□□ 1.27
IRF3-227ENST00000600911 UAP1Q16222 522 aaPredicted RBP23.01■■□□□ 1.27
IRF3-227ENST00000600911 AGBL4Q5VU57 503 aa23.01■■□□□ 1.27
IRF3-227ENST00000600911 BRAT1Q6PJG6 821 aa23.01■■□□□ 1.27
IRF3-227ENST00000600911 CAPN12Q6ZSI9 719 aa23.01■■□□□ 1.27
IRF3-227ENST00000600911 LYSMD3Q7Z3D4 306 aa23.01■■□□□ 1.27
IRF3-227ENST00000600911 UNC5BQ8IZJ1 945 aa23.01■■□□□ 1.27
IRF3-227ENST00000600911 PAF1Q8N7H5 531 aa23.01■■□□□ 1.27
IRF3-227ENST00000600911 OSBPL6Q9BZF3 934 aa23.01■■□□□ 1.27
IRF3-227ENST00000600911 BFARQ9NZS9 450 aa23.01■■□□□ 1.27
IRF3-227ENST00000600911 ZNF711Q9Y462 761 aa23.01■■□□□ 1.27
IRF3-227ENST00000600911 TCAF1Q9Y4C2 921 aa23.01■■□□□ 1.27
IRF3-227ENST00000600911 MAD1L1Q9Y6D9 718 aa23.01■■□□□ 1.27
IRF3-227ENST00000600911 ZNF106Q9H2Y7 1883 aaKnown RBP23.01■■□□□ 1.27
IRF3-227ENST00000600911 EML5Q05BV3 1969 aa23.01■■□□□ 1.27
IRF3-227ENST00000600911 SDR42E2A6NKP2 422 aa23■■□□□ 1.27
IRF3-227ENST00000600911 C1QTNF3-AMACRE9PGA6 284 aa23■■□□□ 1.27
IRF3-227ENST00000600911 TAS2R38P59533 333 aa23■■□□□ 1.27
IRF3-227ENST00000600911 RPL26P61254 145 aaKnown RBP23■■□□□ 1.27
IRF3-227ENST00000600911 KYNUQ16719 465 aa23■■□□□ 1.27
IRF3-227ENST00000600911 CFAP58Q5T655 872 aa23■■□□□ 1.27
IRF3-227ENST00000600911 CRTC1Q6UUV9 634 aa23■■□□□ 1.27
IRF3-227ENST00000600911 RFLNAQ6ZTI6 216 aa23■■□□□ 1.27
IRF3-227ENST00000600911 DSG4Q86SJ6 1040 aa23■■□□□ 1.27
IRF3-227ENST00000600911 TTC7BQ86TV6 843 aa23■■□□□ 1.27
IRF3-227ENST00000600911 MFSD3Q96ES6 412 aa23■■□□□ 1.27
IRF3-227ENST00000600911 SCRN2Q96FV2 425 aa23■■□□□ 1.27
IRF3-227ENST00000600911 EBNA1BP2Q99848 306 aaKnown RBP23■■□□□ 1.27
IRF3-227ENST00000600911 FRMD8Q9BZ67 464 aaPredicted RBP23■■□□□ 1.27
IRF3-227ENST00000600911 FOXP3Q9BZS1 431 aa23■■□□□ 1.27
IRF3-227ENST00000600911 IL1RAPL1Q9NZN1 696 aa23■■□□□ 1.27
IRF3-227ENST00000600911 RPL26L1Q9UNX3 145 aaKnown RBP23■■□□□ 1.27
IRF3-227ENST00000600911 TTC28Q96AY4 2481 aa23■■□□□ 1.27
IRF3-227ENST00000600911 CLDN7O95471 211 aa23■■□□□ 1.27
IRF3-227ENST00000600911 C7P10643 843 aa23■■□□□ 1.27
IRF3-227ENST00000600911 ADRB3P13945 408 aa23■■□□□ 1.27
IRF3-227ENST00000600911 ERN2Q76MJ5 926 aaKnown RBP23■■□□□ 1.27
IRF3-227ENST00000600911 OR13C4Q8NGS5 318 aa23■■□□□ 1.27
IRF3-227ENST00000600911 HMGB4Q8WW32 186 aa23■■□□□ 1.27
IRF3-227ENST00000600911 CFAP36Q96G28 342 aa23■■□□□ 1.27
IRF3-227ENST00000600911 IL22Q9GZX6 179 aa23■■□□□ 1.27
IRF3-227ENST00000600911 PABPC3Q9H361 631 aaKnown RBP23■■□□□ 1.27
IRF3-227ENST00000600911 EBF1Q9UH73 591 aa23■■□□□ 1.27
IRF3-227ENST00000600911 SOX13Q9UN79 622 aa23■■□□□ 1.27
IRF3-227ENST00000600911 GOLGA8CPA6NN73 597 aa22.99■■□□□ 1.27
IRF3-227ENST00000600911 EIF3HO15372 352 aaKnown RBP eCLIP22.99■■□□□ 1.27
IRF3-227ENST00000600911 MCM3P25205 808 aa22.99■■□□□ 1.27
IRF3-227ENST00000600911 SSTR1P30872 391 aa22.99■■□□□ 1.27
IRF3-227ENST00000600911 FAM193AP78312 1265 aa22.99■■□□□ 1.27
IRF3-227ENST00000600911 BRD3Q15059 726 aa22.99■■□□□ 1.27
IRF3-227ENST00000600911 DNAJC21Q5F1R6 531 aaKnown RBP22.99■■□□□ 1.27
IRF3-227ENST00000600911 BEND6Q5SZJ8 279 aaPredicted RBP22.99■■□□□ 1.27
IRF3-227ENST00000600911 ESRP1Q6NXG1 681 aaKnown RBP22.99■■□□□ 1.27
IRF3-227ENST00000600911 CASC4Q6P4E1 433 aa22.99■■□□□ 1.27
IRF3-227ENST00000600911 UNC5AQ6ZN44 842 aa22.99■■□□□ 1.27
IRF3-227ENST00000600911 RELL1Q8IUW5 271 aa22.99■■□□□ 1.27
IRF3-227ENST00000600911 HDDC3Q8N4P3 179 aa22.99■■□□□ 1.27
IRF3-227ENST00000600911 HCAR2Q8TDS4 363 aa22.99■■□□□ 1.27
IRF3-227ENST00000600911 CAVIN3Q969G5 261 aa22.99■■□□□ 1.27
IRF3-227ENST00000600911 STAMBPL1Q96FJ0 436 aa22.99■■□□□ 1.27
IRF3-227ENST00000600911 KIFC1Q9BW19 673 aa22.99■■□□□ 1.27
IRF3-227ENST00000600911 HDAC8Q9BY41 377 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms