RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 CD86P42081 329 aa11.73□□□□□ -0.53
CHMP2A-207ENST00000600804 WASP42768 502 aa11.73□□□□□ -0.53
CHMP2A-207ENST00000600804 IRX4P78413 519 aa11.73□□□□□ -0.53
CHMP2A-207ENST00000600804 CCDC15Q0P6D6 951 aa11.73□□□□□ -0.53
CHMP2A-207ENST00000600804 GPS1Q13098 491 aa11.73□□□□□ -0.53
CHMP2A-207ENST00000600804 NUMA1Q14980 2115 aa11.73□□□□□ -0.53
CHMP2A-207ENST00000600804 TPSAB1Q15661 275 aa11.73□□□□□ -0.53
CHMP2A-207ENST00000600804 ELF2Q15723 593 aa11.73□□□□□ -0.53
CHMP2A-207ENST00000600804 ARMC3Q5W041 872 aa11.73□□□□□ -0.53
CHMP2A-207ENST00000600804 DUPD1Q68J44 220 aa11.73□□□□□ -0.53
CHMP2A-207ENST00000600804 C8orf74Q6P047 294 aa11.73□□□□□ -0.53
CHMP2A-207ENST00000600804 RANBP10Q6VN20 620 aa11.73□□□□□ -0.53
CHMP2A-207ENST00000600804 GDPD4Q6W3E5 623 aa11.73□□□□□ -0.53
CHMP2A-207ENST00000600804 PCGF5Q86SE9 256 aa11.73□□□□□ -0.53
CHMP2A-207ENST00000600804 HOOK3Q86VS8 718 aa11.73□□□□□ -0.53
CHMP2A-207ENST00000600804 BBOF1Q8ND07 529 aa11.73□□□□□ -0.53
CHMP2A-207ENST00000600804 DEFB124Q8NES8 71 aa11.73□□□□□ -0.53
CHMP2A-207ENST00000600804 PIP4K2CQ8TBX8 421 aa11.73□□□□□ -0.53
CHMP2A-207ENST00000600804 PPP1R16AQ96I34 528 aa11.73□□□□□ -0.53
CHMP2A-207ENST00000600804 FEM1CQ96JP0 617 aa11.73□□□□□ -0.53
CHMP2A-207ENST00000600804 MRGPRX2Q96LB1 330 aa11.73□□□□□ -0.53
CHMP2A-207ENST00000600804 TRIB3Q96RU7 358 aa11.73□□□□□ -0.53
CHMP2A-207ENST00000600804 RBM15Q96T37 977 aaKnown RBP eCLIP11.73□□□□□ -0.534e-6■□□□□ 8.6
CHMP2A-207ENST00000600804 MLPHQ9BV36 600 aaPredicted RBP11.73□□□□□ -0.53
CHMP2A-207ENST00000600804 SCNM1Q9BWG6 230 aa11.73□□□□□ -0.53
CHMP2A-207ENST00000600804 TDRD1Q9BXT4 1180 aaKnown RBP11.73□□□□□ -0.53
CHMP2A-207ENST00000600804 HDAC8Q9BY41 377 aa11.73□□□□□ -0.53
CHMP2A-207ENST00000600804 FAM129AQ9BZQ8 928 aa11.73□□□□□ -0.53
CHMP2A-207ENST00000600804 MKRN2Q9H000 416 aaKnown RBP11.73□□□□□ -0.53
CHMP2A-207ENST00000600804 MTG2Q9H4K7 406 aa11.73□□□□□ -0.53
CHMP2A-207ENST00000600804 ZDHHC6Q9H6R6 413 aa11.73□□□□□ -0.53
CHMP2A-207ENST00000600804 LRRC40Q9H9A6 602 aa11.73□□□□□ -0.53
CHMP2A-207ENST00000600804 ETNK1Q9HBU6 452 aa11.73□□□□□ -0.53
CHMP2A-207ENST00000600804 ARNT2Q9HBZ2 717 aa11.73□□□□□ -0.53
CHMP2A-207ENST00000600804 ZDHHC4Q9NPG8 344 aa11.73□□□□□ -0.53
CHMP2A-207ENST00000600804 RAB6BQ9NRW1 208 aa11.73□□□□□ -0.53
CHMP2A-207ENST00000600804 TMEM74BQ9NUR3 256 aa11.73□□□□□ -0.53
CHMP2A-207ENST00000600804 PPIL1Q9Y3C6 166 aa11.73□□□□□ -0.53
CHMP2A-207ENST00000600804 TTLL3Q9Y4R7 772 aa11.73□□□□□ -0.53
CHMP2A-207ENST00000600804 RAI2Q9Y5P3 530 aa11.73□□□□□ -0.53
CHMP2A-207ENST00000600804 TRPM6Q9BX84 2022 aa11.72□□□□□ -0.53
CHMP2A-207ENST00000600804 EFCAB8A8MWE9 144 aa11.72□□□□□ -0.53
CHMP2A-207ENST00000600804 AP3B1O00203 1094 aa11.72□□□□□ -0.53
CHMP2A-207ENST00000600804 SLC7A4O43246 635 aa11.72□□□□□ -0.53
CHMP2A-207ENST00000600804 GJB3O75712 270 aa11.72□□□□□ -0.53
CHMP2A-207ENST00000600804 PGLSO95336 258 aa11.72□□□□□ -0.53
CHMP2A-207ENST00000600804 MT-CYBP00156 380 aaPredicted RBP11.72□□□□□ -0.53
CHMP2A-207ENST00000600804 PRLP01236 227 aa11.72□□□□□ -0.53
CHMP2A-207ENST00000600804 IGLV3-19P01714 112 aa11.72□□□□□ -0.53
CHMP2A-207ENST00000600804 HLA-DPA1P20036 260 aa11.72□□□□□ -0.53
CHMP2A-207ENST00000600804 WNT3AP56704 352 aa11.72□□□□□ -0.53
CHMP2A-207ENST00000600804 RPS14P62263 151 aaKnown RBP11.72□□□□□ -0.53
CHMP2A-207ENST00000600804 POLR2LP62875 67 aaKnown RBP11.72□□□□□ -0.53
CHMP2A-207ENST00000600804 CDK18Q07002 472 aa11.72□□□□□ -0.53
CHMP2A-207ENST00000600804 TRAF2Q12933 501 aa11.72□□□□□ -0.53
CHMP2A-207ENST00000600804 CBLBQ13191 982 aa11.72□□□□□ -0.53
CHMP2A-207ENST00000600804 KCNJ11Q14654 390 aa11.72□□□□□ -0.53
CHMP2A-207ENST00000600804 MORF4L2Q15014 288 aa11.72□□□□□ -0.53
CHMP2A-207ENST00000600804 CST6Q15828 149 aa11.72□□□□□ -0.53
CHMP2A-207ENST00000600804 ARSIQ5FYB1 569 aa11.72□□□□□ -0.53
CHMP2A-207ENST00000600804 NAPEPLDQ6IQ20 393 aa11.72□□□□□ -0.53
CHMP2A-207ENST00000600804 ANO7Q6IWH7 933 aa11.72□□□□□ -0.53
CHMP2A-207ENST00000600804 CCDC70Q6NSX1 233 aa11.72□□□□□ -0.53
CHMP2A-207ENST00000600804 USP30Q70CQ3 517 aa11.72□□□□□ -0.53
CHMP2A-207ENST00000600804 PRUNE1Q86TP1 453 aa11.72□□□□□ -0.53
CHMP2A-207ENST00000600804 LINC00523Q86TU6 105 aa11.72□□□□□ -0.53
CHMP2A-207ENST00000600804 TMPRSS6Q8IU80 811 aa11.72□□□□□ -0.53
CHMP2A-207ENST00000600804 CAMK1DQ8IU85 385 aa11.72□□□□□ -0.53
CHMP2A-207ENST00000600804 RYBPQ8N488 228 aaPredicted RBP11.72□□□□□ -0.53
CHMP2A-207ENST00000600804 MCUQ8NE86 351 aa11.72□□□□□ -0.53
CHMP2A-207ENST00000600804 TSTD1Q8NFU3 115 aa11.72□□□□□ -0.53
CHMP2A-207ENST00000600804 SPATA22Q8NHS9 363 aa11.72□□□□□ -0.53
CHMP2A-207ENST00000600804 PIH1D2Q8WWB5 315 aa11.72□□□□□ -0.53
CHMP2A-207ENST00000600804 CPT1BQ92523 772 aa11.72□□□□□ -0.53
CHMP2A-207ENST00000600804 RAB7BQ96AH8 199 aa11.72□□□□□ -0.53
CHMP2A-207ENST00000600804 MRGPRX1Q96LB2 322 aa11.72□□□□□ -0.53
CHMP2A-207ENST00000600804 MCCC1Q96RQ3 725 aaPredicted RBP11.72□□□□□ -0.53
CHMP2A-207ENST00000600804 LYSMD1Q96S90 227 aa11.72□□□□□ -0.53
CHMP2A-207ENST00000600804 SRPK1Q96SB4 655 aaKnown RBP11.72□□□□□ -0.53
CHMP2A-207ENST00000600804 ADGRE3Q9BY15 652 aa11.72□□□□□ -0.53
CHMP2A-207ENST00000600804 FRMD8Q9BZ67 464 aaPredicted RBP11.72□□□□□ -0.53
CHMP2A-207ENST00000600804 TMEM9BQ9NQ34 198 aa11.72□□□□□ -0.53
CHMP2A-207ENST00000600804 WHRNQ9P202 907 aa11.72□□□□□ -0.53
CHMP2A-207ENST00000600804 ASIC3Q9UHC3 531 aa11.72□□□□□ -0.53
CHMP2A-207ENST00000600804 MBD1Q9UIS9 605 aaPredicted RBP11.72□□□□□ -0.53
CHMP2A-207ENST00000600804 SARDHQ9UL12 918 aa11.72□□□□□ -0.53
CHMP2A-207ENST00000600804 TPX2Q9ULW0 747 aaKnown RBP11.72□□□□□ -0.53
CHMP2A-207ENST00000600804 UTP11Q9Y3A2 253 aaKnown RBP11.72□□□□□ -0.53
CHMP2A-207ENST00000600804 ATXN2Q99700 1313 aaKnown RBP11.71□□□□□ -0.53
CHMP2A-207ENST00000600804 TCRBV21S2A2A0A5A6 115 aa11.71□□□□□ -0.53
CHMP2A-207ENST00000600804 SRRM3A6NNA2 597 aaPredicted RBP11.71□□□□□ -0.53
CHMP2A-207ENST00000600804 C16orf96A6NNT2 1141 aa11.71□□□□□ -0.53
CHMP2A-207ENST00000600804 DNALI1O14645 258 aaPredicted RBP11.71□□□□□ -0.53
CHMP2A-207ENST00000600804 KHNYNO15037 678 aaKnown RBP11.71□□□□□ -0.53
CHMP2A-207ENST00000600804 SEC31AO94979 1220 aaKnown RBP11.71□□□□□ -0.53
CHMP2A-207ENST00000600804 NDST3O95803 873 aa11.71□□□□□ -0.53
CHMP2A-207ENST00000600804 IL1BP01584 269 aa11.71□□□□□ -0.53
CHMP2A-207ENST00000600804 FGF1P05230 155 aa11.71□□□□□ -0.53
CHMP2A-207ENST00000600804 UGT2B4P06133 528 aa11.71□□□□□ -0.53
CHMP2A-207ENST00000600804 MLNP12872 115 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms