RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 LIMK2P53671 638 aa17.73■□□□□ 0.43
SHKBP1-224ENST00000600718 PRAMEP78395 509 aa17.73■□□□□ 0.43
SHKBP1-224ENST00000600718 PDE1BQ01064 536 aa17.73■□□□□ 0.43
SHKBP1-224ENST00000600718 RUNX3Q13761 415 aa17.73■□□□□ 0.43
SHKBP1-224ENST00000600718 GRAMD4Q6IC98 578 aa17.73■□□□□ 0.43
SHKBP1-224ENST00000600718 KIAA0408Q6ZU52 694 aa17.73■□□□□ 0.43
SHKBP1-224ENST00000600718 GLT6D1Q7Z4J2 308 aa17.73■□□□□ 0.43
SHKBP1-224ENST00000600718 ST13P5Q8NFI4 369 aaPredicted RBP17.73■□□□□ 0.43
SHKBP1-224ENST00000600718 ACMSDQ8TDX5 336 aa17.73■□□□□ 0.43
SHKBP1-224ENST00000600718 DENND1AQ8TEH3 1009 aa17.73■□□□□ 0.43
SHKBP1-224ENST00000600718 PIH1D2Q8WWB5 315 aa17.73■□□□□ 0.43
SHKBP1-224ENST00000600718 SRPK1Q96SB4 655 aaKnown RBP17.73■□□□□ 0.43
SHKBP1-224ENST00000600718 KLF6Q99612 283 aaPredicted RBP17.73■□□□□ 0.43
SHKBP1-224ENST00000600718 CIPCQ9C0C6 399 aa17.73■□□□□ 0.43
SHKBP1-224ENST00000600718 MFSD1Q9H3U5 465 aa17.73■□□□□ 0.43
SHKBP1-224ENST00000600718 MAGEE1Q9HCI5 957 aa17.73■□□□□ 0.43
SHKBP1-224ENST00000600718 NLE1Q9NVX2 485 aaPredicted RBP17.73■□□□□ 0.43
SHKBP1-224ENST00000600718 OTOL1A6NHN0 477 aaPredicted RBP17.72■□□□□ 0.43
SHKBP1-224ENST00000600718 RPP40O75818 363 aaKnown RBP17.72■□□□□ 0.43
SHKBP1-224ENST00000600718 ZWINTO95229 277 aa17.72■□□□□ 0.43
SHKBP1-224ENST00000600718 PIGNO95427 931 aa17.72■□□□□ 0.43
SHKBP1-224ENST00000600718 LSP1P33241 339 aa17.72■□□□□ 0.43
SHKBP1-224ENST00000600718 HADHAP40939 763 aa17.72■□□□□ 0.43
SHKBP1-224ENST00000600718 ABL2P42684 1182 aa17.72■□□□□ 0.43
SHKBP1-224ENST00000600718 RECQLP46063 649 aaPredicted RBP17.72■□□□□ 0.43
SHKBP1-224ENST00000600718 C2CD4AQ8NCU7 369 aaPredicted RBP17.72■□□□□ 0.43
SHKBP1-224ENST00000600718 MDGA1Q8NFP4 955 aa17.72■□□□□ 0.43
SHKBP1-224ENST00000600718 CYB5D2Q8WUJ1 264 aa17.72■□□□□ 0.43
SHKBP1-224ENST00000600718 ATXN2LQ8WWM7 1075 aaKnown RBP17.72■□□□□ 0.43
SHKBP1-224ENST00000600718 SPOCK2Q92563 424 aa17.72■□□□□ 0.43
SHKBP1-224ENST00000600718 NECTIN4Q96NY8 510 aa17.72■□□□□ 0.43
SHKBP1-224ENST00000600718 POMKQ9H5K3 350 aa17.72■□□□□ 0.43
SHKBP1-224ENST00000600718 ELOVL2Q9NXB9 296 aa17.72■□□□□ 0.43
SHKBP1-224ENST00000600718 SRRM3A6NNA2 597 aaPredicted RBP17.71■□□□□ 0.43
SHKBP1-224ENST00000600718 WASH3PC4AMC7 463 aa17.71■□□□□ 0.43
SHKBP1-224ENST00000600718 ECI2O75521 394 aa17.71■□□□□ 0.43
SHKBP1-224ENST00000600718 LPOP22079 712 aaPredicted RBP17.71■□□□□ 0.43
SHKBP1-224ENST00000600718 CCNFP41002 786 aa17.71■□□□□ 0.43
SHKBP1-224ENST00000600718 SLC6A11P48066 632 aa17.71■□□□□ 0.43
SHKBP1-224ENST00000600718 CCNHP51946 323 aaPredicted RBP17.71■□□□□ 0.43
SHKBP1-224ENST00000600718 ZNF140P52738 457 aaPredicted RBP17.71■□□□□ 0.43
SHKBP1-224ENST00000600718 OR6P1Q8NGX9 317 aa17.71■□□□□ 0.43
SHKBP1-224ENST00000600718 FRS2Q8WU20 508 aa17.71■□□□□ 0.43
SHKBP1-224ENST00000600718 APOPT1Q96IL0 206 aa17.71■□□□□ 0.43
SHKBP1-224ENST00000600718 DNAJC1Q96KC8 554 aaKnown RBP17.71■□□□□ 0.43
SHKBP1-224ENST00000600718 TBATAQ96M53 351 aa17.71■□□□□ 0.43
SHKBP1-224ENST00000600718 ZNF641Q96N77 438 aaPredicted RBP17.71■□□□□ 0.43
SHKBP1-224ENST00000600718 RHOJQ9H4E5 214 aa17.71■□□□□ 0.43
SHKBP1-224ENST00000600718 GGT7Q9UJ14 662 aa17.71■□□□□ 0.43
SHKBP1-224ENST00000600718 FBXO5Q9UKT4 447 aa17.71■□□□□ 0.43
SHKBP1-224ENST00000600718 A0A1W2PQ67 120 aa17.71■□□□□ 0.43
SHKBP1-224ENST00000600718 TM9SF1O15321 606 aa17.71■□□□□ 0.43
SHKBP1-224ENST00000600718 AHSGP02765 367 aa17.71■□□□□ 0.43
SHKBP1-224ENST00000600718 GKP32189 559 aa17.71■□□□□ 0.43
SHKBP1-224ENST00000600718 RPA3P35244 121 aaPredicted RBP17.71■□□□□ 0.43
SHKBP1-224ENST00000600718 ARSDP51689 593 aa17.71■□□□□ 0.43
SHKBP1-224ENST00000600718 CTBP1Q13363 440 aa17.71■□□□□ 0.43
SHKBP1-224ENST00000600718 ADGRE1Q14246 886 aa17.71■□□□□ 0.43
SHKBP1-224ENST00000600718 GRM2Q14416 872 aa17.71■□□□□ 0.43
SHKBP1-224ENST00000600718 FSTL4Q6MZW2 842 aa17.71■□□□□ 0.43
SHKBP1-224ENST00000600718 PARM1Q6UWI2 310 aa17.71■□□□□ 0.43
SHKBP1-224ENST00000600718 DPY19L3Q6ZPD9 716 aa17.71■□□□□ 0.43
SHKBP1-224ENST00000600718 DENND6AQ8IWF6 608 aa17.71■□□□□ 0.43
SHKBP1-224ENST00000600718 PAF1Q8N7H5 531 aa17.71■□□□□ 0.43
SHKBP1-224ENST00000600718 MGARPQ8TDB4 240 aa17.71■□□□□ 0.43
SHKBP1-224ENST00000600718 SORCS1Q8WY21 1168 aa17.71■□□□□ 0.43
SHKBP1-224ENST00000600718 KXD1Q9BQD3 176 aa17.71■□□□□ 0.43
SHKBP1-224ENST00000600718 SUV39H2Q9H5I1 410 aa17.71■□□□□ 0.43
SHKBP1-224ENST00000600718 MKS1Q9NXB0 559 aa17.71■□□□□ 0.43
SHKBP1-224ENST00000600718 PLA2G4CQ9UP65 541 aa17.71■□□□□ 0.43
SHKBP1-224ENST00000600718 MYLKQ15746 1914 aa17.71■□□□□ 0.43
SHKBP1-224ENST00000600718 COPEO14579 308 aa17.7■□□□□ 0.42
SHKBP1-224ENST00000600718 AURKAO14965 403 aa17.7■□□□□ 0.42
SHKBP1-224ENST00000600718 BUD23O43709 281 aaKnown RBP17.7■□□□□ 0.42
SHKBP1-224ENST00000600718 BNIP3LO60238 219 aa17.7■□□□□ 0.42
SHKBP1-224ENST00000600718 IGFBP4P22692 258 aa17.7■□□□□ 0.42
SHKBP1-224ENST00000600718 POLD2P49005 469 aa17.7■□□□□ 0.42
SHKBP1-224ENST00000600718 ST8SIA6P61647 398 aa17.7■□□□□ 0.42
SHKBP1-224ENST00000600718 ILF2Q12905 390 aaKnown RBP17.7■□□□□ 0.42
SHKBP1-224ENST00000600718 EIF4HQ15056 248 aaKnown RBP17.7■□□□□ 0.42
SHKBP1-224ENST00000600718 ZNF470Q6ECI4 717 aa17.7■□□□□ 0.42
SHKBP1-224ENST00000600718 Q6ZVU0 165 aa17.7■□□□□ 0.42
SHKBP1-224ENST00000600718 MTSS1LQ765P7 747 aa17.7■□□□□ 0.42
SHKBP1-224ENST00000600718 GALNT7Q86SF2 657 aa17.7■□□□□ 0.42
SHKBP1-224ENST00000600718 ZC3HC1Q86WB0 502 aaKnown RBP17.7■□□□□ 0.42
SHKBP1-224ENST00000600718 TTC30BQ8N4P2 665 aa17.7■□□□□ 0.42
SHKBP1-224ENST00000600718 DCLK2Q8N568 766 aa17.7■□□□□ 0.42
SHKBP1-224ENST00000600718 OR13C4Q8NGS5 318 aa17.7■□□□□ 0.42
SHKBP1-224ENST00000600718 OR2A12Q8NGT7 310 aa17.7■□□□□ 0.42
SHKBP1-224ENST00000600718 DYDC1Q8WWB3 177 aa17.7■□□□□ 0.42
SHKBP1-224ENST00000600718 MYLIPQ8WY64 445 aa17.7■□□□□ 0.42
SHKBP1-224ENST00000600718 ISL2Q96A47 359 aa17.7■□□□□ 0.42
SHKBP1-224ENST00000600718 VOPP1Q96AW1 172 aa17.7■□□□□ 0.42
SHKBP1-224ENST00000600718 CDKN2AIPNLQ96HQ2 116 aa17.7■□□□□ 0.42
SHKBP1-224ENST00000600718 VPS39Q96JC1 886 aa17.7■□□□□ 0.42
SHKBP1-224ENST00000600718 CCDC134Q9H6E4 229 aa17.7■□□□□ 0.42
SHKBP1-224ENST00000600718 PHTF1Q9UMS5 762 aa17.7■□□□□ 0.42
SHKBP1-224ENST00000600718 ALDOAP04075 364 aaKnown RBP17.7■□□□□ 0.42
SHKBP1-224ENST00000600718 GABRB3P28472 473 aa17.7■□□□□ 0.42
SHKBP1-224ENST00000600718 SLC1A2P43004 574 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms