RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 TP53INP2Q8IXH6 220 aa15.89■□□□□ 0.13
VRK3-221ENST00000600284 LSMEM2Q8N112 164 aa15.89■□□□□ 0.13
VRK3-221ENST00000600284 PAF1Q8N7H5 531 aa15.89■□□□□ 0.13
VRK3-221ENST00000600284 WDR48Q8TAF3 677 aa15.89■□□□□ 0.13
VRK3-221ENST00000600284 FAM71BQ8TC56 605 aa15.89■□□□□ 0.13
VRK3-221ENST00000600284 MAPK15Q8TD08 544 aa15.89■□□□□ 0.13
VRK3-221ENST00000600284 NSMCE1Q8WV22 266 aa15.89■□□□□ 0.13
VRK3-221ENST00000600284 SCG3Q8WXD2 468 aaKnown RBP15.89■□□□□ 0.13
VRK3-221ENST00000600284 FGF11Q92914 225 aa15.89■□□□□ 0.13
VRK3-221ENST00000600284 NAT6Q93015 286 aa15.89■□□□□ 0.13
VRK3-221ENST00000600284 NUDCD1Q96RS6 583 aa15.89■□□□□ 0.13
VRK3-221ENST00000600284 CLPBQ9H078 707 aa15.89■□□□□ 0.13
VRK3-221ENST00000600284 PCDH18Q9HCL0 1135 aa15.89■□□□□ 0.13
VRK3-221ENST00000600284 KCTD5Q9NXV2 234 aa15.89■□□□□ 0.13
VRK3-221ENST00000600284 IFNKQ9P0W0 207 aa15.89■□□□□ 0.13
VRK3-221ENST00000600284 LCMT1Q9UIC8 334 aa15.89■□□□□ 0.13
VRK3-221ENST00000600284 ADAMTS20P59510 1910 aa15.89■□□□□ 0.13
VRK3-221ENST00000600284 CPED1A4D0V7 1026 aa15.88■□□□□ 0.13
VRK3-221ENST00000600284 RECQL5O94762 991 aaPredicted RBP15.88■□□□□ 0.13
VRK3-221ENST00000600284 ELFN1P0C7U0 828 aa15.88■□□□□ 0.13
VRK3-221ENST00000600284 MYF5P13349 255 aa15.88■□□□□ 0.13
VRK3-221ENST00000600284 ACTN2P35609 894 aa15.88■□□□□ 0.13
VRK3-221ENST00000600284 TRIM23P36406 574 aa15.88■□□□□ 0.13
VRK3-221ENST00000600284 EIF2S3P41091 472 aaKnown RBP15.88■□□□□ 0.13
VRK3-221ENST00000600284 KIAA1024LP59773 190 aa15.88■□□□□ 0.13
VRK3-221ENST00000600284 RALGDSQ12967 914 aa15.88■□□□□ 0.13
VRK3-221ENST00000600284 C1orf61Q13536 156 aa15.88■□□□□ 0.13
VRK3-221ENST00000600284 ESRP1Q6NXG1 681 aaKnown RBP15.88■□□□□ 0.13
VRK3-221ENST00000600284 GUSBP11Q6P575 273 aa15.88■□□□□ 0.13
VRK3-221ENST00000600284 ENPP7Q6UWV6 458 aa15.88■□□□□ 0.13
VRK3-221ENST00000600284 PDZD3Q86UT5 571 aa15.88■□□□□ 0.13
VRK3-221ENST00000600284 SNIP1Q8TAD8 396 aaKnown RBP15.88■□□□□ 0.13
VRK3-221ENST00000600284 BTBD6Q96KE9 485 aa15.88■□□□□ 0.13
VRK3-221ENST00000600284 WDR92Q96MX6 357 aa15.88■□□□□ 0.13
VRK3-221ENST00000600284 MYLKQ15746 1914 aa15.88■□□□□ 0.13
VRK3-221ENST00000600284 RRP8O43159 456 aaKnown RBP15.87■□□□□ 0.13
VRK3-221ENST00000600284 TLX3O43711 291 aaPredicted RBP15.87■□□□□ 0.13
VRK3-221ENST00000600284 BRINP1O60477 761 aa15.87■□□□□ 0.13
VRK3-221ENST00000600284 TCEA3O75764 348 aa15.87■□□□□ 0.13
VRK3-221ENST00000600284 TNFP01375 233 aa15.87■□□□□ 0.13
VRK3-221ENST00000600284 PRKCGP05129 697 aa15.87■□□□□ 0.13
VRK3-221ENST00000600284 CTSEP14091 401 aa15.87■□□□□ 0.13
VRK3-221ENST00000600284 KELP23276 732 aa15.87■□□□□ 0.13
VRK3-221ENST00000600284 IL4RP24394 825 aa15.87■□□□□ 0.13
VRK3-221ENST00000600284 CASP14P31944 242 aa15.87■□□□□ 0.13
VRK3-221ENST00000600284 SRP54P61011 504 aaKnown RBP15.87■□□□□ 0.13
VRK3-221ENST00000600284 KRT81Q14533 505 aa15.87■□□□□ 0.13
VRK3-221ENST00000600284 ALG11Q2TAA5 492 aa15.87■□□□□ 0.13
VRK3-221ENST00000600284 SKOR2Q2VWA4 1001 aaPredicted RBP15.87■□□□□ 0.13
VRK3-221ENST00000600284 ZSCAN23Q3MJ62 389 aa15.87■□□□□ 0.13
VRK3-221ENST00000600284 MARC1Q5VT66 337 aa15.87■□□□□ 0.13
VRK3-221ENST00000600284 TXNRD3NBQ6F5E7 133 aa15.87■□□□□ 0.13
VRK3-221ENST00000600284 LRRC69Q6ZNQ3 347 aa15.87■□□□□ 0.13
VRK3-221ENST00000600284 EFL1Q7Z2Z2 1120 aaKnown RBP15.87■□□□□ 0.13
VRK3-221ENST00000600284 GKN2Q86XP6 184 aa15.87■□□□□ 0.13
VRK3-221ENST00000600284 HID1Q8IV36 788 aa15.87■□□□□ 0.13
VRK3-221ENST00000600284 SLC35F3Q8IY50 421 aa15.87■□□□□ 0.13
VRK3-221ENST00000600284 ATPAF2Q8N5M1 289 aa15.87■□□□□ 0.13
VRK3-221ENST00000600284 TSACCQ96A04 125 aaPredicted RBP15.87■□□□□ 0.13
VRK3-221ENST00000600284 NSMCE3Q96MG7 304 aa15.87■□□□□ 0.13
VRK3-221ENST00000600284 MGME1Q9BQP7 344 aa15.87■□□□□ 0.13
VRK3-221ENST00000600284 UVRAGQ9P2Y5 699 aa15.87■□□□□ 0.13
VRK3-221ENST00000600284 KLQ9UEF7 1012 aa15.87■□□□□ 0.13
VRK3-221ENST00000600284 PHTF1Q9UMS5 762 aa15.87■□□□□ 0.13
VRK3-221ENST00000600284 NENFQ9UMX5 172 aa15.87■□□□□ 0.13
VRK3-221ENST00000600284 DOLKQ9UPQ8 538 aa15.87■□□□□ 0.13
VRK3-221ENST00000600284 OR1A2Q9Y585 309 aa15.87■□□□□ 0.13
VRK3-221ENST00000600284 DGKBQ9Y6T7 804 aa15.87■□□□□ 0.13
VRK3-221ENST00000600284 CACNB4O00305 520 aaPredicted RBP15.86■□□□□ 0.13
VRK3-221ENST00000600284 TNFRSF10CO14798 259 aa15.86■□□□□ 0.13
VRK3-221ENST00000600284 CSO75390 466 aaKnown RBP15.86■□□□□ 0.13
VRK3-221ENST00000600284 DXOO77932 396 aaKnown RBP15.86■□□□□ 0.13
VRK3-221ENST00000600284 PCCBP05166 539 aa15.86■□□□□ 0.13
VRK3-221ENST00000600284 TGM2P21980 687 aa15.86■□□□□ 0.13
VRK3-221ENST00000600284 MMP13P45452 471 aa15.86■□□□□ 0.13
VRK3-221ENST00000600284 ABCG1P45844 678 aa15.86■□□□□ 0.13
VRK3-221ENST00000600284 LSSP48449 732 aa15.86■□□□□ 0.13
VRK3-221ENST00000600284 ARSEP51690 589 aa15.86■□□□□ 0.13
VRK3-221ENST00000600284 ISXQ2M1V0 245 aa15.86■□□□□ 0.13
VRK3-221ENST00000600284 TBC1D25Q3MII6 688 aa15.86■□□□□ 0.13
VRK3-221ENST00000600284 CBARPQ8N350 705 aaPredicted RBP15.86■□□□□ 0.13
VRK3-221ENST00000600284 PGBD5Q8N414 524 aa15.86■□□□□ 0.13
VRK3-221ENST00000600284 ARL10Q8N8L6 244 aa15.86■□□□□ 0.13
VRK3-221ENST00000600284 PLA2G15Q8NCC3 412 aa15.86■□□□□ 0.13
VRK3-221ENST00000600284 ZNF564Q8TBZ8 553 aaPredicted RBP15.86■□□□□ 0.13
VRK3-221ENST00000600284 ZNF578Q96N58 590 aaPredicted RBP15.86■□□□□ 0.13
VRK3-221ENST00000600284 DCBLD2Q96PD2 775 aa15.86■□□□□ 0.13
VRK3-221ENST00000600284 NOD2Q9HC29 1040 aa15.86■□□□□ 0.13
VRK3-221ENST00000600284 PADI4Q9UM07 663 aa15.86■□□□□ 0.13
VRK3-221ENST00000600284 PCDHB1Q9Y5F3 818 aa15.86■□□□□ 0.13
VRK3-221ENST00000600284 PCDHGC4Q9Y5F7 938 aa15.86■□□□□ 0.13
VRK3-221ENST00000600284 PDE2AO00408 941 aaPredicted RBP15.85■□□□□ 0.13
VRK3-221ENST00000600284 CBFA2T2O43439 604 aa15.85■□□□□ 0.13
VRK3-221ENST00000600284 USP12O75317 370 aa15.85■□□□□ 0.13
VRK3-221ENST00000600284 CPP00450 1065 aa15.85■□□□□ 0.13
VRK3-221ENST00000600284 H2AFZP0C0S5 128 aa15.85■□□□□ 0.13
VRK3-221ENST00000600284 CYP2A6P11509 494 aaPredicted RBP15.85■□□□□ 0.13
VRK3-221ENST00000600284 GM2AP17900 193 aa15.85■□□□□ 0.13
VRK3-221ENST00000600284 CES1P23141 567 aa15.85■□□□□ 0.13
VRK3-221ENST00000600284 SSR1P43307 286 aaKnown RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms