RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 SLC17A9Q9BYT1 436 aa13.81□□□□□ -0.2
VRK3-219ENST00000600137 CAPN10Q9HC96 672 aa13.81□□□□□ -0.2
VRK3-219ENST00000600137 VPS45Q9NRW7 570 aa13.81□□□□□ -0.2
VRK3-219ENST00000600137 FAM153AQ9UHL3 310 aa13.81□□□□□ -0.2
VRK3-219ENST00000600137 PCDH15Q96QU1 1955 aa13.81□□□□□ -0.2
VRK3-219ENST00000600137 ADAMTS9Q9P2N4 1935 aa13.8□□□□□ -0.2
VRK3-219ENST00000600137 NPIPB15A6NHN6 443 aaPredicted RBP13.8□□□□□ -0.2
VRK3-219ENST00000600137 ANKRD66B4E2M5 251 aa13.8□□□□□ -0.2
VRK3-219ENST00000600137 F5H423 210 aaPredicted RBP13.8□□□□□ -0.2
VRK3-219ENST00000600137 OPHN1O60890 802 aa13.8□□□□□ -0.2
VRK3-219ENST00000600137 LRP3O75074 770 aa13.8□□□□□ -0.2
VRK3-219ENST00000600137 PMPCBO75439 489 aa13.8□□□□□ -0.2
VRK3-219ENST00000600137 EPOP01588 193 aa13.8□□□□□ -0.2
VRK3-219ENST00000600137 ALPIP09923 528 aa13.8□□□□□ -0.2
VRK3-219ENST00000600137 ATXN1LP0C7T5 689 aaKnown RBP13.8□□□□□ -0.2
VRK3-219ENST00000600137 ZNF806P0C7X5 589 aa13.8□□□□□ -0.2
VRK3-219ENST00000600137 CTPS1P17812 591 aa13.8□□□□□ -0.2
VRK3-219ENST00000600137 PSMB4P28070 264 aa13.8□□□□□ -0.2
VRK3-219ENST00000600137 HOXD12P35452 270 aa13.8□□□□□ -0.2
VRK3-219ENST00000600137 LIG3P49916 1009 aa13.8□□□□□ -0.2
VRK3-219ENST00000600137 WNT3AP56704 352 aa13.8□□□□□ -0.2
VRK3-219ENST00000600137 RPL26P61254 145 aaKnown RBP13.8□□□□□ -0.2
VRK3-219ENST00000600137 RPS21P63220 83 aaKnown RBP13.8□□□□□ -0.2
VRK3-219ENST00000600137 FAM193AP78312 1265 aa13.8□□□□□ -0.2
VRK3-219ENST00000600137 CDK18Q07002 472 aa13.8□□□□□ -0.2
VRK3-219ENST00000600137 SPEM2Q0P670 501 aa13.8□□□□□ -0.2
VRK3-219ENST00000600137 ELP6Q0PNE2 266 aa13.8□□□□□ -0.2
VRK3-219ENST00000600137 MSLNQ13421 630 aaPredicted RBP13.8□□□□□ -0.2
VRK3-219ENST00000600137 AGERQ15109 404 aa13.8□□□□□ -0.2
VRK3-219ENST00000600137 SYCP2LQ5T4T6 812 aa13.8□□□□□ -0.2
VRK3-219ENST00000600137 SLC23A3Q6PIS1 610 aa13.8□□□□□ -0.2
VRK3-219ENST00000600137 CRTC1Q6UUV9 634 aa13.8□□□□□ -0.2
VRK3-219ENST00000600137 RANBP10Q6VN20 620 aa13.8□□□□□ -0.2
VRK3-219ENST00000600137 TSPAN33Q86UF1 283 aa13.8□□□□□ -0.2
VRK3-219ENST00000600137 RGL4Q8IZJ4 473 aa13.8□□□□□ -0.2
VRK3-219ENST00000600137 C12orf50Q8NA57 414 aaPredicted RBP13.8□□□□□ -0.2
VRK3-219ENST00000600137 TMEM145Q8NBT3 493 aa13.8□□□□□ -0.2
VRK3-219ENST00000600137 CENPTQ96BT3 561 aa13.8□□□□□ -0.2
VRK3-219ENST00000600137 EID2BQ96D98 161 aa13.8□□□□□ -0.2
VRK3-219ENST00000600137 BMFQ96LC9 184 aa13.8□□□□□ -0.2
VRK3-219ENST00000600137 LENG8Q96PV6 779 aaPredicted RBP13.8□□□□□ -0.2
VRK3-219ENST00000600137 LYSMD1Q96S90 227 aa13.8□□□□□ -0.2
VRK3-219ENST00000600137 WRAP53Q9BUR4 548 aaKnown RBP13.8□□□□□ -0.2
VRK3-219ENST00000600137 AP1M1Q9BXS5 423 aa13.8□□□□□ -0.2
VRK3-219ENST00000600137 TM9SF3Q9HD45 589 aa13.8□□□□□ -0.2
VRK3-219ENST00000600137 HAUS2Q9NVX0 235 aa13.8□□□□□ -0.2
VRK3-219ENST00000600137 RSPH14Q9UHP6 348 aa13.8□□□□□ -0.2
VRK3-219ENST00000600137 TPX2Q9ULW0 747 aaKnown RBP13.8□□□□□ -0.2
VRK3-219ENST00000600137 RPL26L1Q9UNX3 145 aaKnown RBP13.8□□□□□ -0.2
VRK3-219ENST00000600137 ZNF148Q9UQR1 794 aa13.8□□□□□ -0.2
VRK3-219ENST00000600137 NEU2Q9Y3R4 380 aa13.8□□□□□ -0.2
VRK3-219ENST00000600137 SAR1BQ9Y6B6 198 aa13.8□□□□□ -0.2
VRK3-219ENST00000600137 DNAH14Q0VDD8 3507 aa13.79□□□□□ -0.2
VRK3-219ENST00000600137 CTAGE9A4FU28 777 aa13.79□□□□□ -0.2
VRK3-219ENST00000600137 MEI4A8MW99 385 aa13.79□□□□□ -0.2
VRK3-219ENST00000600137 A8MX80 341 aa13.79□□□□□ -0.2
VRK3-219ENST00000600137 PGRMC1O00264 195 aaKnown RBP13.79□□□□□ -0.2
VRK3-219ENST00000600137 SLC31A1O15431 190 aa13.79□□□□□ -0.2
VRK3-219ENST00000600137 ZNF189O75820 626 aaPredicted RBP13.79□□□□□ -0.2
VRK3-219ENST00000600137 HEXIM1O94992 359 aaKnown RBP13.79□□□□□ -0.2
VRK3-219ENST00000600137 ZSCAN5DPP0CG00 497 aa13.79□□□□□ -0.2
VRK3-219ENST00000600137 IRX4P78413 519 aa13.79□□□□□ -0.2
VRK3-219ENST00000600137 PTSQ03393 145 aa13.79□□□□□ -0.2
VRK3-219ENST00000600137 OLIG2Q13516 323 aa13.79□□□□□ -0.2
VRK3-219ENST00000600137 CNGA3Q16281 694 aa13.79□□□□□ -0.2
VRK3-219ENST00000600137 CSRP2Q16527 193 aa13.79□□□□□ -0.2
VRK3-219ENST00000600137 PARP6Q2NL67 630 aa13.79□□□□□ -0.2
VRK3-219ENST00000600137 P3H1Q32P28 736 aa13.79□□□□□ -0.2
VRK3-219ENST00000600137 TCEAL6Q6IPX3 200 aa13.79□□□□□ -0.2
VRK3-219ENST00000600137 DENND5AQ6IQ26 1287 aa13.79□□□□□ -0.2
VRK3-219ENST00000600137 SYT10Q6XYQ8 523 aa13.79□□□□□ -0.2
VRK3-219ENST00000600137 RFLNAQ6ZTI6 216 aa13.79□□□□□ -0.2
VRK3-219ENST00000600137 KDELC2Q7Z4H8 507 aa13.79□□□□□ -0.2
VRK3-219ENST00000600137 ZCCHC9Q8N567 271 aaKnown RBP13.79□□□□□ -0.2
VRK3-219ENST00000600137 TCEAL3Q969E4 200 aa13.79□□□□□ -0.2
VRK3-219ENST00000600137 COQ10AQ96MF6 247 aa13.79□□□□□ -0.2
VRK3-219ENST00000600137 SLC6A18Q96N87 628 aa13.79□□□□□ -0.2
VRK3-219ENST00000600137 RXFP3Q9NSD7 469 aa13.79□□□□□ -0.2
VRK3-219ENST00000600137 SEMA4GQ9NTN9 838 aa13.79□□□□□ -0.2
VRK3-219ENST00000600137 GMEB2Q9UKD1 530 aa13.79□□□□□ -0.2
VRK3-219ENST00000600137 DMTF1Q9Y222 760 aa13.79□□□□□ -0.2
VRK3-219ENST00000600137 CA5BQ9Y2D0 317 aa13.79□□□□□ -0.2
VRK3-219ENST00000600137 COQ6Q9Y2Z9 468 aa13.79□□□□□ -0.2
VRK3-219ENST00000600137 DMXL1Q9Y485 3027 aa13.79□□□□□ -0.2
VRK3-219ENST00000600137 A0A1B0GTW7 788 aa13.78□□□□□ -0.2
VRK3-219ENST00000600137 CAPN8A6NHC0 703 aa13.78□□□□□ -0.2
VRK3-219ENST00000600137 NEMP1O14524 444 aa13.78□□□□□ -0.2
VRK3-219ENST00000600137 BCAT2O15382 392 aaPredicted RBP13.78□□□□□ -0.2
VRK3-219ENST00000600137 GFRA3O60609 400 aa13.78□□□□□ -0.2
VRK3-219ENST00000600137 NDST3O95803 873 aa13.78□□□□□ -0.2
VRK3-219ENST00000600137 AGTP01019 485 aa13.78□□□□□ -0.2
VRK3-219ENST00000600137 C6P13671 934 aa13.78□□□□□ -0.2
VRK3-219ENST00000600137 XPAP23025 273 aaPredicted RBP13.78□□□□□ -0.2
VRK3-219ENST00000600137 VIPR1P32241 457 aa13.78□□□□□ -0.2
VRK3-219ENST00000600137 RPL22P35268 128 aaKnown RBP13.78□□□□□ -0.2
VRK3-219ENST00000600137 NUDT1P36639 197 aa13.78□□□□□ -0.2
VRK3-219ENST00000600137 COILP38432 576 aaPredicted RBP13.78□□□□□ -0.2
VRK3-219ENST00000600137 CHRNA4P43681 627 aa13.78□□□□□ -0.2
VRK3-219ENST00000600137 CSNK1EP49674 416 aaKnown RBP13.78□□□□□ -0.2
VRK3-219ENST00000600137 RACK1P63244 317 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms