RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 SLC10A2Q12908 348 aaPredicted RBP22.7■■□□□ 1.22
CCDC9-204ENST00000599398 EIF2B5Q13144 721 aaKnown RBP22.7■■□□□ 1.22
CCDC9-204ENST00000599398 ZNF211Q13398 564 aaPredicted RBP22.7■■□□□ 1.22
CCDC9-204ENST00000599398 LIPIQ6XZB0 460 aa22.7■■□□□ 1.22
CCDC9-204ENST00000599398 ZNF548Q8NEK5 533 aaPredicted RBP22.7■■□□□ 1.22
CCDC9-204ENST00000599398 OR4C6Q8NH72 309 aa22.7■■□□□ 1.22
CCDC9-204ENST00000599398 MAML1Q92585 1016 aa22.7■■□□□ 1.22
CCDC9-204ENST00000599398 RNF25Q96BH1 459 aaPredicted RBP22.7■■□□□ 1.22
CCDC9-204ENST00000599398 TSGA13Q96PP4 275 aa22.7■■□□□ 1.22
CCDC9-204ENST00000599398 DDX56Q9NY93 547 aaKnown RBP22.7■■□□□ 1.22
CCDC9-204ENST00000599398 DTLQ9NZJ0 730 aa22.7■■□□□ 1.22
CCDC9-204ENST00000599398 KLF15Q9UIH9 416 aa22.7■■□□□ 1.22
CCDC9-204ENST00000599398 PCDHGA1Q9Y5H4 931 aa22.7■■□□□ 1.22
CCDC9-204ENST00000599398 PLXNB3Q9ULL4 1909 aa22.7■■□□□ 1.22
CCDC9-204ENST00000599398 KNTC1P50748 2209 aa22.69■■□□□ 1.22
CCDC9-204ENST00000599398 C3orf70A6NLC5 250 aaPredicted RBP22.69■■□□□ 1.22
CCDC9-204ENST00000599398 ZNF487B1APH4 448 aa22.69■■□□□ 1.22
CCDC9-204ENST00000599398 APOL1O14791 398 aa22.69■■□□□ 1.22
CCDC9-204ENST00000599398 RECQL5O94762 991 aaPredicted RBP22.69■■□□□ 1.22
CCDC9-204ENST00000599398 LCA5LO95447 670 aa22.69■■□□□ 1.22
CCDC9-204ENST00000599398 PROS1P07225 676 aa22.69■■□□□ 1.22
CCDC9-204ENST00000599398 CCNB1P14635 433 aa22.69■■□□□ 1.22
CCDC9-204ENST00000599398 CKMT2P17540 419 aa22.69■■□□□ 1.22
CCDC9-204ENST00000599398 INPP5AQ14642 412 aa22.69■■□□□ 1.22
CCDC9-204ENST00000599398 ACOX1Q15067 660 aa22.69■■□□□ 1.22
CCDC9-204ENST00000599398 PROX2Q3B8N5 592 aa22.69■■□□□ 1.22
CCDC9-204ENST00000599398 ARMC12Q5T9G4 340 aa22.69■■□□□ 1.22
CCDC9-204ENST00000599398 MACC1Q6ZN28 852 aa22.69■■□□□ 1.22
CCDC9-204ENST00000599398 TMPRSS7Q7RTY8 843 aa22.69■■□□□ 1.22
CCDC9-204ENST00000599398 RFX6Q8HWS3 928 aa22.69■■□□□ 1.22
CCDC9-204ENST00000599398 CCDC13Q8IYE1 715 aa22.69■■□□□ 1.22
CCDC9-204ENST00000599398 GALNT15Q8N3T1 639 aa22.69■■□□□ 1.22
CCDC9-204ENST00000599398 PLD5Q8N7P1 536 aa22.69■■□□□ 1.22
CCDC9-204ENST00000599398 LMX1AQ8TE12 382 aa22.69■■□□□ 1.22
CCDC9-204ENST00000599398 TMEM121BQ9BXQ6 578 aaPredicted RBP22.69■■□□□ 1.22
CCDC9-204ENST00000599398 APOBEC3BQ9UH17 382 aaKnown RBP22.69■■□□□ 1.22
CCDC9-204ENST00000599398 PHTF1Q9UMS5 762 aa22.69■■□□□ 1.22
CCDC9-204ENST00000599398 TFR2Q9UP52 801 aa22.69■■□□□ 1.22
CCDC9-204ENST00000599398 RAI2Q9Y5P3 530 aa22.69■■□□□ 1.22
CCDC9-204ENST00000599398 CACNA1BQ00975 2339 aa22.69■■□□□ 1.22
CCDC9-204ENST00000599398 SOWAHDA6NJG2 315 aa22.68■■□□□ 1.22
CCDC9-204ENST00000599398 SCAMP1O15126 338 aa22.68■■□□□ 1.22
CCDC9-204ENST00000599398 PGLSO95336 258 aa22.68■■□□□ 1.22
CCDC9-204ENST00000599398 C1SP09871 688 aa22.68■■□□□ 1.22
CCDC9-204ENST00000599398 DSC2Q02487 901 aa22.68■■□□□ 1.22
CCDC9-204ENST00000599398 AGERQ15109 404 aa22.68■■□□□ 1.22
CCDC9-204ENST00000599398 FAXCQ5TGI0 409 aa22.68■■□□□ 1.22
CCDC9-204ENST00000599398 DENND2CQ68D51 928 aa22.68■■□□□ 1.22
CCDC9-204ENST00000599398 VSIG1Q86XK7 387 aa22.68■■□□□ 1.22
CCDC9-204ENST00000599398 PHACTR4Q8IZ21 702 aa22.68■■□□□ 1.22
CCDC9-204ENST00000599398 RBFAQ8N0V3 343 aa22.68■■□□□ 1.22
CCDC9-204ENST00000599398 BTN2A2Q8WVV5 523 aa22.68■■□□□ 1.22
CCDC9-204ENST00000599398 SPOCK2Q92563 424 aa22.68■■□□□ 1.22
CCDC9-204ENST00000599398 HDAC11Q96DB2 347 aa22.68■■□□□ 1.22
CCDC9-204ENST00000599398 APOOQ9BUR5 198 aa22.68■■□□□ 1.22
CCDC9-204ENST00000599398 SLC13A1Q9BZW2 595 aa22.68■■□□□ 1.22
CCDC9-204ENST00000599398 GOLPH3Q9H4A6 298 aa22.68■■□□□ 1.22
CCDC9-204ENST00000599398 NLGN3Q9NZ94 848 aa22.68■■□□□ 1.22
CCDC9-204ENST00000599398 OR1A2Q9Y585 309 aa22.68■■□□□ 1.22
CCDC9-204ENST00000599398 AQP9O43315 295 aa22.67■■□□□ 1.22
CCDC9-204ENST00000599398 IPO7O95373 1038 aaKnown RBP22.67■■□□□ 1.22
CCDC9-204ENST00000599398 CYP2A6P11509 494 aaPredicted RBP22.67■■□□□ 1.22
CCDC9-204ENST00000599398 ZFXP17010 805 aaPredicted RBP22.67■■□□□ 1.22
CCDC9-204ENST00000599398 HTR1BP28222 390 aa22.67■■□□□ 1.22
CCDC9-204ENST00000599398 VIPR1P32241 457 aa22.67■■□□□ 1.22
CCDC9-204ENST00000599398 PEX5P50542 639 aa22.67■■□□□ 1.22
CCDC9-204ENST00000599398 HADHBP55084 474 aaKnown RBP22.67■■□□□ 1.22
CCDC9-204ENST00000599398 DYNLT1P63172 113 aa22.67■■□□□ 1.22
CCDC9-204ENST00000599398 PPARDQ03181 441 aa22.67■■□□□ 1.22
CCDC9-204ENST00000599398 SLC9A4Q6AI14 798 aa22.67■■□□□ 1.22
CCDC9-204ENST00000599398 CCNI2Q6ZMN8 369 aaPredicted RBP22.67■■□□□ 1.22
CCDC9-204ENST00000599398 TMTC1Q8IUR5 882 aa22.67■■□□□ 1.22
CCDC9-204ENST00000599398 PLA2G15Q8NCC3 412 aa22.67■■□□□ 1.22
CCDC9-204ENST00000599398 FATE1Q969F0 183 aa22.67■■□□□ 1.22
CCDC9-204ENST00000599398 LGMNQ99538 433 aa22.67■■□□□ 1.22
CCDC9-204ENST00000599398 DUSP23Q9BVJ7 150 aa22.67■■□□□ 1.22
CCDC9-204ENST00000599398 TCEAL2Q9H3H9 227 aaPredicted RBP22.67■■□□□ 1.22
CCDC9-204ENST00000599398 SPASTQ9UBP0 616 aa22.67■■□□□ 1.22
CCDC9-204ENST00000599398 AMACRQ9UHK6 382 aa22.67■■□□□ 1.22
CCDC9-204ENST00000599398 ALG6Q9Y672 507 aa22.67■■□□□ 1.22
CCDC9-204ENST00000599398 EPN1Q9Y6I3 576 aaPredicted RBP22.67■■□□□ 1.22
CCDC9-204ENST00000599398 ASPMQ8IZT6 3477 aa22.66■■□□□ 1.22
CCDC9-204ENST00000599398 FAM149AA5PLN7 773 aa22.66■■□□□ 1.22
CCDC9-204ENST00000599398 K7ESM1 405 aa22.66■■□□□ 1.22
CCDC9-204ENST00000599398 NDUFA10O95299 355 aa22.66■■□□□ 1.22
CCDC9-204ENST00000599398 HLA-DQB2P05538 268 aa22.66■■□□□ 1.22
CCDC9-204ENST00000599398 GIMD1P0DJR0 217 aa22.66■■□□□ 1.22
CCDC9-204ENST00000599398 CDK4P11802 303 aa22.66■■□□□ 1.22
CCDC9-204ENST00000599398 CTPS1P17812 591 aa22.66■■□□□ 1.22
CCDC9-204ENST00000599398 CES1P23141 567 aa22.66■■□□□ 1.22
CCDC9-204ENST00000599398 AP1B1Q10567 949 aa22.66■■□□□ 1.22
CCDC9-204ENST00000599398 MTM1Q13496 603 aa22.66■■□□□ 1.22
CCDC9-204ENST00000599398 C1orf61Q13536 156 aa22.66■■□□□ 1.22
CCDC9-204ENST00000599398 NFATC4Q14934 902 aa22.66■■□□□ 1.22
CCDC9-204ENST00000599398 CNGA3Q16281 694 aa22.66■■□□□ 1.22
CCDC9-204ENST00000599398 PRRT3Q5FWE3 981 aa22.66■■□□□ 1.22
CCDC9-204ENST00000599398 ENPP7Q6UWV6 458 aa22.66■■□□□ 1.22
CCDC9-204ENST00000599398 NPNTQ6UXI9 565 aa22.66■■□□□ 1.22
CCDC9-204ENST00000599398 USP45Q70EL2 814 aa22.66■■□□□ 1.22
CCDC9-204ENST00000599398 MARCH9Q86YJ5 346 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms