RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 PDCD6IPQ8WUM4 868 aaKnown RBP17.12■□□□□ 0.33
CCDC9-202ENST00000595659 ECHDC3Q96DC8 303 aa17.12■□□□□ 0.33
CCDC9-202ENST00000595659 TRIM11Q96F44 468 aa17.12■□□□□ 0.33
CCDC9-202ENST00000595659 TBATAQ96M53 351 aa17.12■□□□□ 0.33
CCDC9-202ENST00000595659 WDR92Q96MX6 357 aa17.12■□□□□ 0.33
CCDC9-202ENST00000595659 ZNF578Q96N58 590 aaPredicted RBP17.12■□□□□ 0.33
CCDC9-202ENST00000595659 FUCA2Q9BTY2 467 aa17.12■□□□□ 0.33
CCDC9-202ENST00000595659 ISCUQ9H1K1 167 aa17.12■□□□□ 0.33
CCDC9-202ENST00000595659 CBX8Q9HC52 389 aa17.12■□□□□ 0.33
CCDC9-202ENST00000595659 MRPL40Q9NQ50 206 aaKnown RBP17.12■□□□□ 0.33
CCDC9-202ENST00000595659 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.12■□□□□ 0.33
CCDC9-202ENST00000595659 SEPT3Q9UH03 358 aa17.12■□□□□ 0.33
CCDC9-202ENST00000595659 RABGEF1Q9UJ41 708 aa17.12■□□□□ 0.33
CCDC9-202ENST00000595659 GPR34Q9UPC5 381 aa17.12■□□□□ 0.33
CCDC9-202ENST00000595659 PCDHGC4Q9Y5F7 938 aa17.12■□□□□ 0.33
CCDC9-202ENST00000595659 KNTC1P50748 2209 aa17.11■□□□□ 0.33
CCDC9-202ENST00000595659 SYCE3A1L190 88 aa17.11■□□□□ 0.33
CCDC9-202ENST00000595659 TMEM202A6NGA9 273 aa17.11■□□□□ 0.33
CCDC9-202ENST00000595659 TRAFD1O14545 582 aaPredicted RBP17.11■□□□□ 0.33
CCDC9-202ENST00000595659 TNFP01375 233 aa17.11■□□□□ 0.33
CCDC9-202ENST00000595659 PRB1P04280 392 aa17.11■□□□□ 0.33
CCDC9-202ENST00000595659 ALPIP09923 528 aa17.11■□□□□ 0.33
CCDC9-202ENST00000595659 RARAP10276 462 aa17.11■□□□□ 0.33
CCDC9-202ENST00000595659 GM2AP17900 193 aa17.11■□□□□ 0.33
CCDC9-202ENST00000595659 PCK1P35558 622 aa17.11■□□□□ 0.33
CCDC9-202ENST00000595659 ARL4AP40617 200 aa17.11■□□□□ 0.33
CCDC9-202ENST00000595659 CXADRP78310 365 aa17.11■□□□□ 0.33
CCDC9-202ENST00000595659 FANCCQ00597 558 aa17.11■□□□□ 0.33
CCDC9-202ENST00000595659 NSUN2Q08J23 767 aaKnown RBP eCLIP17.11■□□□□ 0.33
CCDC9-202ENST00000595659 RFTN1Q14699 578 aaPredicted RBP17.11■□□□□ 0.33
CCDC9-202ENST00000595659 ACAP1Q15027 740 aa17.11■□□□□ 0.33
CCDC9-202ENST00000595659 ACOX1Q15067 660 aa17.11■□□□□ 0.33
CCDC9-202ENST00000595659 PTPRRQ15256 657 aa17.11■□□□□ 0.33
CCDC9-202ENST00000595659 DPYSL2Q16555 572 aa17.11■□□□□ 0.33
CCDC9-202ENST00000595659 HGSNATQ68CP4 663 aa17.11■□□□□ 0.33
CCDC9-202ENST00000595659 POLNQ7Z5Q5 900 aa17.11■□□□□ 0.33
CCDC9-202ENST00000595659 SFTPA2Q8IWL1 248 aa17.11■□□□□ 0.33
CCDC9-202ENST00000595659 LSMEM2Q8N112 164 aa17.11■□□□□ 0.33
CCDC9-202ENST00000595659 PELI3Q8N2H9 469 aa17.11■□□□□ 0.33
CCDC9-202ENST00000595659 PGBD5Q8N414 524 aa17.11■□□□□ 0.33
CCDC9-202ENST00000595659 FSTL5Q8N475 847 aaPredicted RBP17.11■□□□□ 0.33
CCDC9-202ENST00000595659 LZTR1Q8N653 840 aa17.11■□□□□ 0.33
CCDC9-202ENST00000595659 ZNF248Q8NDW4 579 aa17.11■□□□□ 0.33
CCDC9-202ENST00000595659 TPCN2Q8NHX9 752 aa17.11■□□□□ 0.33
CCDC9-202ENST00000595659 SCG3Q8WXD2 468 aaKnown RBP17.11■□□□□ 0.33
CCDC9-202ENST00000595659 OR1E3Q8WZA6 343 aa17.11■□□□□ 0.33
CCDC9-202ENST00000595659 NAT6Q93015 286 aa17.11■□□□□ 0.33
CCDC9-202ENST00000595659 FUBP1Q96AE4 644 aaKnown RBP17.11■□□□□ 0.33
CCDC9-202ENST00000595659 PDXPQ96GD0 296 aa17.11■□□□□ 0.33
CCDC9-202ENST00000595659 HIC2Q96JB3 615 aa17.11■□□□□ 0.33
CCDC9-202ENST00000595659 CSPG4P5Q96PW8 444 aa17.11■□□□□ 0.33
CCDC9-202ENST00000595659 PSKH2Q96QS6 385 aa17.11■□□□□ 0.33
CCDC9-202ENST00000595659 THAP2Q9H0W7 228 aa17.11■□□□□ 0.33
CCDC9-202ENST00000595659 CHD5Q8TDI0 1954 aa17.11■□□□□ 0.33
CCDC9-202ENST00000595659 TDRD6O60522 2096 aaKnown RBP17.11■□□□□ 0.33
CCDC9-202ENST00000595659 RENBPP51606 427 aa17.1■□□□□ 0.33
CCDC9-202ENST00000595659 PCBP4P57723 403 aaKnown RBP17.1■□□□□ 0.33
CCDC9-202ENST00000595659 MAXP61244 160 aa17.1■□□□□ 0.33
CCDC9-202ENST00000595659 POLR2LP62875 67 aaKnown RBP17.1■□□□□ 0.33
CCDC9-202ENST00000595659 MTM1Q13496 603 aa17.1■□□□□ 0.33
CCDC9-202ENST00000595659 ZNF235Q14590 738 aa17.1■□□□□ 0.33
CCDC9-202ENST00000595659 AGERQ15109 404 aa17.1■□□□□ 0.33
CCDC9-202ENST00000595659 BOLA3Q53S33 107 aa17.1■□□□□ 0.33
CCDC9-202ENST00000595659 TMCO4Q5TGY1 634 aa17.1■□□□□ 0.33
CCDC9-202ENST00000595659 DENND2CQ68D51 928 aa17.1■□□□□ 0.33
CCDC9-202ENST00000595659 TMCO3Q6UWJ1 677 aa17.1■□□□□ 0.33
CCDC9-202ENST00000595659 DPPA4Q7L190 304 aa17.1■□□□□ 0.33
CCDC9-202ENST00000595659 GKN2Q86XP6 184 aa17.1■□□□□ 0.33
CCDC9-202ENST00000595659 ARL10Q8N8L6 244 aa17.1■□□□□ 0.33
CCDC9-202ENST00000595659 CCDC74AQ96AQ1 378 aa17.1■□□□□ 0.33
CCDC9-202ENST00000595659 LGR4Q9BXB1 951 aa17.1■□□□□ 0.33
CCDC9-202ENST00000595659 SUDS3Q9H7L9 328 aaPredicted RBP17.1■□□□□ 0.33
CCDC9-202ENST00000595659 NOD2Q9HC29 1040 aa17.1■□□□□ 0.33
CCDC9-202ENST00000595659 FGF22Q9HCT0 170 aa17.1■□□□□ 0.33
CCDC9-202ENST00000595659 ASCL3Q9NQ33 180 aa17.1■□□□□ 0.33
CCDC9-202ENST00000595659 B4GALT6Q9UBX8 382 aa17.1■□□□□ 0.33
CCDC9-202ENST00000595659 MOSPD1Q9UJG1 213 aa17.1■□□□□ 0.33
CCDC9-202ENST00000595659 AGRPO00253 132 aa17.09■□□□□ 0.33
CCDC9-202ENST00000595659 CACNB4O00305 520 aaPredicted RBP17.09■□□□□ 0.33
CCDC9-202ENST00000595659 DXOO77932 396 aaKnown RBP17.09■□□□□ 0.33
CCDC9-202ENST00000595659 PEX11BO96011 259 aa17.09■□□□□ 0.33
CCDC9-202ENST00000595659 RBMS1P29558 406 aaKnown RBP17.09■□□□□ 0.33
CCDC9-202ENST00000595659 SSR1P43307 286 aaKnown RBP17.09■□□□□ 0.33
CCDC9-202ENST00000595659 ZNF135P52742 658 aaPredicted RBP17.09■□□□□ 0.33
CCDC9-202ENST00000595659 AP1S1P61966 158 aa17.09■□□□□ 0.33
CCDC9-202ENST00000595659 CCL7P80098 99 aa17.09■□□□□ 0.33
CCDC9-202ENST00000595659 MMRN1Q13201 1228 aa17.09■□□□□ 0.33
CCDC9-202ENST00000595659 SPIDRQ14159 915 aa17.09■□□□□ 0.33
CCDC9-202ENST00000595659 NFKBIBQ15653 356 aa17.09■□□□□ 0.33
CCDC9-202ENST00000595659 FIGNQ5HY92 759 aa17.09■□□□□ 0.33
CCDC9-202ENST00000595659 SDR16C5Q8N3Y7 309 aa17.09■□□□□ 0.33
CCDC9-202ENST00000595659 OR56A4Q8NGH8 313 aa17.09■□□□□ 0.33
CCDC9-202ENST00000595659 ATL2Q8NHH9 583 aa17.09■□□□□ 0.33
CCDC9-202ENST00000595659 ZNF599Q96NL3 588 aa17.09■□□□□ 0.33
CCDC9-202ENST00000595659 UBL7Q96S82 380 aaPredicted RBP17.09■□□□□ 0.33
CCDC9-202ENST00000595659 RBM15Q96T37 977 aaKnown RBP eCLIP17.09■□□□□ 0.33
CCDC9-202ENST00000595659 NUP85Q9BW27 656 aa17.09■□□□□ 0.33
CCDC9-202ENST00000595659 CPNE5Q9HCH3 593 aa17.09■□□□□ 0.33
CCDC9-202ENST00000595659 PCDH18Q9HCL0 1135 aa17.09■□□□□ 0.33
CCDC9-202ENST00000595659 ANAPC7Q9UJX3 599 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms